Solanum lycopersicum mRNA Solyc06g066060.2.1

mRNA details  
Name
Solyc06g066060.2.1
Type
mRNA
Length
1,695
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 **** Q1HR75_AEDAE); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch06:41410756..41417580
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
6825
Nb exon
12
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g066060.2.1 ATP-dependent RNA helicase (AHRD V1 **** Q1HR75_AEDAE); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TTATCACACACTTTTTAGTTCTACTAACATTTTTTTCTGCAGACGCTCCAAACCCTAACCCTAATTCGCCGCAAGAACTCAGCTTTTCCGGCAGTGTCCAACTGTAAAGTAGCTAAGATGGGAGATACAAAGGAGAACGAAGCTTACGAGGAAGAACTTCTCGACTACGAAGAAGATGATGAGAAGGCCCCAGATTCCGTTAATGGAAAAGTTAACGGCGAATCTGCCAAGAAGTGAGGGTTATGTTGGAATTCACAGTTCTGGATTCAGAGACTTTCTTTTAAAGCCAGAGCTACTGCGGGCTATTGTGGATTCAGGGTTTGAGCATCCCTCTGAAGTGCAACATGAGTGTATTCCACAAGCTATTCTGGGTATGGATGTTATTTGTCAAGCCAAATCTGGAATGGGCAAAACTGCTGTTTTTGTTCTTTCGACTCTGCAGCAGATTGAACCTGTTCCTGGTCAGGTTGCTGCTTTGGTCCTATGTCATACAAGGGAATTAGCTTATCAGATCTGTCATGAATTTGAGAGGTTCAGCACATATTTACCTGATATCAAGGTTGCTGTCTTCTATGGTGGTGTCAATATCAAACTTCACAAGGAGCTTCTGAAGAATGAATGTCCTCATATTGTTGTTGGAACTCCTGGAAGAGTACTTGCATTGGCTAGAGATAAAGACCTTCCTCTGAAGAATGTGAGGCATTTTATTCTGGATGAATGTGACAAGATGCTTGATTCACTTGACATGAGGAGAGATGTGCAGGCAATCTTCAAGATGACTCCCCATGACAAGCAAGTAATGATGTTTTCAGCAACGCTCAGCAAGGAGATCCGTCCAGTCTGCAAAAAATTTATGCAAGATCCAATGGAAATTTATGTTGACGATGAGGCAAAGTTGACCCTTCATGGACTTGTACAGCATTACATCAAATTGAGTGAAACGGAGAAAAACCGGAAGCTAAATGATCTGCTGGATGCCTTGGACTTCAATCAAGTGGTAATATTTGTCAAGAGTGTGAACAGGGCAGCAGAGCTGAATAAATTACTAGCGGAGTGTAATTTTCCATCTATCTGCATCCACTCTGGCATGACTCAGGAGGAAAGATTGACGCGCTACAAAGCTTTCAAGGAGGGTCATAAGAGAATTCTTGTGGCAACTGATTTGGTTGGTAGGGGCATTGACATTGAAAGGGTTAACATTGTTATTAACTATGACATGCCAGATTCTGCAGACACTTACCTTCACAGAGTGGGTAGAGCTGGTAGGTTTGGGACGAAAGGCCTTGCCATTACATTTGTGTCCTCTGCGTCAGATTCTGAAGTTCTTAATCAGGTTCAGGAAAGGTTTGAAGTAGACATAAAAGAGCTTCCTGAGCAGATTGATACTTCTACGTACATGCCATCTTAGTGATATGAGAGTGTCCTGGCGGATATTAGTATCATTTTGCCTGAAGATAAGGGGAAACTGACAGATGTTTGCTTTAGTTTATCGCCTATCTTGGCCTTTTGGACCTTCTATTTTGAAGGAATGGTGGCCTCCTACTCTATGCTTTTGACTCTGCTGGACTGCTGTACCTTAATTGAACCATGCTGTTTCTTATCAGTTAAGAGGAACATGACAAATGTCTCTTGAGTGTTATCTTGTTTAGCTCTATAATTTATACTTCTCAATGATTTATTATGCCTAGTTTTTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g066060.2.1SL2.50ch06:41411090..41417293411+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g066060.2SL2.50ch06:41410756..414175806,825+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g066060.2.1.1SL2.50ch06:41410756..41410859104+n/a
exonexon:Solyc06g066060.2.1.10SL2.50ch06:41416229..4141631284+1
exonexon:Solyc06g066060.2.1.11SL2.50ch06:41416395..4141645864+n/a
exonexon:Solyc06g066060.2.1.12SL2.50ch06:41417283..41417580298+n/a
exonexon:Solyc06g066060.2.1.2SL2.50ch06:41411020..41411152133+n/a
exonexon:Solyc06g066060.2.1.3SL2.50ch06:41411648..41411748101+n/a
exonexon:Solyc06g066060.2.1.4SL2.50ch06:41412864..41413036173+1
exonexon:Solyc06g066060.2.1.5SL2.50ch06:41413139..41413370232+2
exonexon:Solyc06g066060.2.1.6SL2.50ch06:41413466..41413584119+n/a
exonexon:Solyc06g066060.2.1.7SL2.50ch06:41414032..4141408857+2
exonexon:Solyc06g066060.2.1.8SL2.50ch06:41414173..41414357185+n/a
exonexon:Solyc06g066060.2.1.9SL2.50ch06:41415993..41416137145+n/a
intronintron:Solyc06g066060.2.1.1SL2.50ch06:41410860..41411019n/a+n/a
intronintron:Solyc06g066060.2.1.10SL2.50ch06:41416313..41416394n/a+n/a
intronintron:Solyc06g066060.2.1.11SL2.50ch06:41416459..41417282n/a+n/a
intronintron:Solyc06g066060.2.1.2SL2.50ch06:41411153..41411647n/a+n/a
intronintron:Solyc06g066060.2.1.3SL2.50ch06:41411749..41412863n/a+n/a
intronintron:Solyc06g066060.2.1.4SL2.50ch06:41413037..41413138n/a+n/a
intronintron:Solyc06g066060.2.1.5SL2.50ch06:41413371..41413465n/a+n/a
intronintron:Solyc06g066060.2.1.6SL2.50ch06:41413585..41414031n/a+n/a
intronintron:Solyc06g066060.2.1.7SL2.50ch06:41414089..41414172n/a+n/a
intronintron:Solyc06g066060.2.1.8SL2.50ch06:41414358..41415992n/a+n/a
intronintron:Solyc06g066060.2.1.9SL2.50ch06:41416138..41416228n/a+n/a
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Related viewsNone found
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