Solanum lycopersicum mRNA Solyc06g068280.2.1

mRNA details  
Name
Solyc06g068280.2.1
Type
mRNA
Length
2,255
Organism
Solanum lycopersicum
Description
ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch06:42308721..42312394
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
  • GO:0008270
Length
3674
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g068280.2.1 ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

GGGGCAAATAAAATTGCTCTCCTTCTGGAGAAGTCGGCTTATTTATGTTTTGGATCCTAATTCAGTGGCATACTATAAATACCTGAAATTGATTCATCCTTCATCAGAACGGCAACGGACCTTGAGCGCAGCAACATACTAGTGGTCGCCGGAATTTAGTTCCCAGCAATTACTCGAGCGGAGATTAGTCTCTCTGCAATTACCTACTTTTTTGCTATTGCTCAGATGGCAGACCACTTAAATATGGAGATTGAAGAGGAGGATGATTACGTTGAGTATGTACCAGTTGCTAAGCGCAGGGCAATTGAGGCCCAAAAGATCCTTCAGCGCAAGGGGAAATCTGAAGCATTTGAAGAAGAAGAGGAGAAAATAAAGCTTGTTGAAGCGAAGCCTAGTTTACTTGTGAAGGCATCTCAGTTAAAGAAAGAGCAACCTGAGATAAGTCATGCTGAACAAGTGTTTCAGCAAGAGAAGGAGATGATTGAGCATTTATCTGATAAGAAAACGTTGATGTCTGTTCGGGAACTAGCCAAGGGAATTACTTATACAGAGCCTTTACGCACTGGGTGGAAGCCACCCTTAGCCATCAGACGGAACTCGAAGAAAGCTTGTGATGCCATTCGAAAACAGTGGCATATCATTGTGGAAGGGGATGATGTTACCCCACCAATCAAGAACTTCAAAGATATGAGGTTCCCTGAACCAATTCTGAAGAAACTCAGAGCAAAGGGTATTATTCAGCCAACGCCAATCCAAGTGCAGGGGCTTCCAGTGATTTTATCAGGTCGGGATATGATAGGTATAGCTTTCACAGGTTCAGGTAAGACATTAGTTTTTGTGCTGCCGCTTATCATGGTGGCATTGCAAGAAGAAATTATGTTGCCTATTGCCCCTGGGGAAGGACCATTTGGCTTGATTATTTGTCCATCTAGAGAGCTTGCCAGACAGACTTATGAAGTTATAGAACAGTTTATAGAACCTCTGATGGAGAGTGGTTATCCGGAATTGAGGCCTTTGCTATGCATTGGTGGAGTTGATATGAAATCCCAGGTTGATGTTGTGAAGAGGGGAGTTCATATTGTTGTTGCTACTCCTGGAAGACTGAAAGATCTGCTAGCGAAGAAGAAAATGAACCTTGACAACTGCAGATACTTGACGCTTGATGAGGCAGACAGACTGGTAGATCTTGGTTTTGAAGATGATATTAGGGAGGTGTTTGATCATTTCAAAGCTCAAAGACAAACTCTTCTATTTTCTGCTACAATGCCCACAAAGATCCAAAACTTTGCAAGAAATGCACTTGTTAAACCAGTAATTGTGAATGTGGGCAGAGCTGGAGCAGCCAATCTTGATGTGATCCAGGAAGTGGAGTATGTGAAGCAGGAGGCCAAGATTGTTTACCTTCTCGAATGCTTGCAAAAAACACCTCCTCCTGTTCTGGTTTTCTGTGAGAATAAGGCTGATGTGGATGATATCCATGAGTATTTGCTCTTAAAAGGAGTTGAAGCTGTGGCTGTTCATGGAGGCAAGGATCAAGAAGAGAGAGAATACGCAATTGCAGCTTTCAAAGCATGCAAGAAAGATGTTTTAGTTGCCACTGACGTTGCCTCAAAGGGGCTGGATTTTCCTGATATTCAACATGTGATTAACTATGATATGCCTGCTGAAATTGAAAACTATGTGCACAGGATTGGACGAACAGGACGATGTGGAAAAACAGGAATTGCCACCACATTTATTAACAAGAACCAGAGCGAAACTACTCTGCTTGATCTAAAGCACTTGCTGCAAGAAGCAAAGCAGAGAATCCCTCCAGTCCTTGCAGAGCTCAATGATCCCATGGATGATGTCGATGCCATCACAGATGCAAGTGGAGTAAAGGGTTGTGCATATTGTGGTGGGCTTGGTCATCGTATCCGGGACTGTCCCAAACTAGACCACCAAAGAAGTCAACAAATTGCAAATTCAAGGCGGGACTACTTCGGCTCTGGAGGTTATCGTGGAGAAATTTGATTCTAATTTTCGTTTGTTTACTGTAACATGCAAAATGTGTTAGCTTATTTCTGTTCCTTGTGATCAAATTCAGTAGTTCTGCCATAAATGTAGTTCTATTACTTACCTCACAGTAATCCCTAAAGTTATCGTTTCTACAATGTTCTTTGAATGTAAGACATGGCATATAATTTGCAGCATACATGTTTCAAGTCTAGAATATCAAATCTTATGAGACCTAAGAAGATGGATATTTGGAGTCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g068280.2.1SL2.50ch06:42308962..42312169596-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g068280.2SL2.50ch06:42308721..423123943,674-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g068280.2.1.1SL2.50ch06:42312149..42312394246-n/a
exonexon:Solyc06g068280.2.1.2SL2.50ch06:42310917..42311818902-1
exonexon:Solyc06g068280.2.1.3SL2.50ch06:42308721..423098271,107-n/a
intronintron:Solyc06g068280.2.1.2SL2.50ch06:42311819..42312148n/a-n/a
intronintron:Solyc06g068280.2.1.3SL2.50ch06:42309828..42310916n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17853576%2Fdetails feature 17853576
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