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Solanum lycopersicum mRNA Solyc06g068870.2.1

mRNA details  
Name
Solyc06g068870.2.1
Type
mRNA
Length
2,047
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** A9YWR2_MEDTR); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch06:42693942..42699381
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
5440
Nb exon
5
Sifter term
  • GO:0016563
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g068870.2.1 BHLH transcription factor (AHRD V1 *-** A9YWR2_MEDTR); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

GGAAAAGGGTATATGTGAGCCATTTGTTTACAAGTAGGGGTATATATGAGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGGGTATATCAGACCCTTTTCCCTTAAAAAAACAAAAAAAAAAAAAGAAATGCTCTCAAGAGTTAACAGTATGCAGGTTTGGGATATGGAAGGCAAACAAGAAGAAGAAAAAGAAGAAAATTTTAGCAACAAGGAGAATACCACTAATGTTGAGCTTGAAAACAAACAAGATATGGAATTGGGTGCACTTTCTACATTCAAATCTATGTTAGATGGTACAGATGTAGATTGGTATCACAACAACATGCAAAACCATACTGAAAATATCTGTTTCACTCAGAATTTCACTGAATTAGCTGAAAACAGCATGTTTCTACAGCCAGTAGTACCAGTGGATTCTTCATCTTCTTGTTCACCATCTTCAGTTTCTGTTTTCAACAATCTAGACCCATCTCAGGTACATTACTTGTTAGCCCAAAAGGCTATTAACAACAACCCTTTGGATTATAGTTTTAATTTGGGTTGTGAAAATGGTTTTCTTGAAGCTCAAGGTATGGGTGGTTTGAATAAAGGGGGATTTCTTCTTGCTGGTGGTGGGTTTCATGATTTGAGCTCACAGAACCAAATGGGTAACCCCAATTTGAATTCATTTACTCAATACCCATCATCCCATTTGCCCCAAAATACTACTACTACTGGGTTTAGTCCACTAGGGTTTGTTGATGGTTCTGCAAATGAGAACTCTCTGTTTCTCAATAGGTCCAAGTTGTTAAAGCCACTTGATAATTTTGCTTCAAATGGAGCACAACCAACCCTTTTTCAGAAAAGGGCTGCTCTTAGGAAGAACTTAGCTAATACTACTGGTGGCAGTTTGGGGGATTTCGGAGGTGAAATTGGCCAGAATTCCATGAATGGAGAGAATGAAAGGAAGAGAAAGTGGGGTAGTGGGGAAGAACTTGATGATGTGAGCTTTGATGGGTGCACATTGAGTTATGATTCAGATGACCTTACTGAAAATGTTACTAATAAGGTGGATGATACTGTTAAGAATGGTGGAAATAGCTCAAATGCAACTAGCACTGTCACCTGTGGGAATCAGAAAGGAAAGAAAAAGGGACTTCCGGCTAAGAATTTGATGGCTGAACGACGACGTAGGAAGAAGCTAAACGATAGGCTTTACATGTTGAGGTCTGTTGTACCAAGGATTAGCAAGATGGACAGGGCTTCAATCTTAGGGGATGCAATTGAGTACTTAAAGGAGCTTTTACAGAAAATCAATGACCTGCATAATGAACTGGAGTCCACGCCACCTAGCTCTTCACTGACCCAAACAACAAGCTTCTATCCTCTAACACCAACTGGACCAGCTCTGCCAGGCCGCATCAAGGAAGAACTCTATCCGAGTTCATTTGCAAGCCCACTGTCTAGCCCGACTGGACAACCTGCAAGGGTTGAAGTAAAGGCAAGAGAAGGAAGAGCTGTGAATATCCATATGTTTTGCAGCCGCAGACCAGGCCTCTTACTCTCAACAATGAGGGCACTCGACAACCTCGGACTGGACATCCAACAAGCTGTTATCAGCTGCTTCAATGGATTTGCCTTAGATATCTTTAGAGCTGAGCAATGCAAAGAAGGTCAAGACTTTCATCCTGATCAAATCAAAGCAGTACTGCTGGATTCCGCTGGTTGCCATGGGATGATATGAGCTTCTGTGATTGACAAAGGGAAACAATGTAGCCACAACTTTCAACTTTAGACTCTTCTTGTTGTTCTAGCCAATTTCCTATGCTCATATTGTATTTCTATATTTCATCCAGCAGGCTGTTGTTTTGTTTTACAACTCACAATTTGCTATTCCATGAACCTTTGCTTCCATTTATCAGTTACTTAGCGAACCGATTAACTAGCAGTTTTCTCAATTGTCCTGCAGTTTTAGTGTATAAAAAGCATATGCAAGGAAAATTTGGATATGTCAATGAAATTCACTCATTAATTCTGATATTATTTTGAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g068870.2.1SL2.50ch06:42694247..42697329532-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g068870.2SL2.50ch06:42693942..426993815,440-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g068870.2.1.1SL2.50ch06:42699254..42699381128-n/a
exonexon:Solyc06g068870.2.1.2SL2.50ch06:42696226..426973461,121-n/a
exonexon:Solyc06g068870.2.1.3SL2.50ch06:42695188..42695424237-n/a
exonexon:Solyc06g068870.2.1.4SL2.50ch06:42694845..42695015171-n/a
exonexon:Solyc06g068870.2.1.5SL2.50ch06:42693942..42694331390-n/a
intronintron:Solyc06g068870.2.1.2SL2.50ch06:42697347..42699253n/a-n/a
intronintron:Solyc06g068870.2.1.3SL2.50ch06:42695425..42696225n/a-n/a
intronintron:Solyc06g068870.2.1.4SL2.50ch06:42695016..42695187n/a-n/a
intronintron:Solyc06g068870.2.1.5SL2.50ch06:42694332..42694844n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17854241%2Fdetails feature 17854241
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