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Solanum lycopersicum mRNA Solyc06g069370.2.1

mRNA details  
Name
Solyc06g069370.2.1
Type
mRNA
Length
1,937
Organism
Solanum lycopersicum
Description
Transcription factor protein (AHRD V1 *-** Q4H2R4_CIOIN); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch06:43120671..43125477
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4807
Nb exon
11
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g069370.2.1 Transcription factor protein (AHRD V1 *-** Q4H2R4_CIOIN); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGAGTTACCTCAATCCAGGCCTTTTGGAACAGAAGGGAGGAAGACGACGCATGATTTTCTTTCACTATATTCACCAATTGAACAAGATCCAAGACCTTCTCAAGGTGGCCACCTACAAACTCATGATTTCTTTCAACCTCTAGAACAAGCAAGGAAGACTGTTGGGAAAGAAGAAAATAAAGTTGAGGTAGAGGCTATAGAAAAGCAGCCTCCATCAGCAGCACATATTCTTCCTGGTGGCATTGGCACATATAGCATTTCTTATTCACAGCAAAGGTTTCCAAAGCCAGAAGCAAACACATTTGCTGTTACACAAACTAGCAGTACAGATAGAGACGATAGAAACTCAAACTGCAGTTCTTACTCAGGAAGTGGTTTTGCATTATGGAATGAATCTGCCATGAAGAAGGGAAAGACTGGGAAGGAGAATCTCGCTGGAGATAGACATGTCGTAAGAGAAGCAGGTTTAAACATTGGAGGAGGGAAATGTACGACATCATTAGAACGGCAATCACAATTGTCTTCAAATCATAATCATAACACTGCAACCTTGAGCTCACACTCATCTCCTCAGCAACCATCAGCAATGGAGAATCAGAGTTTCATACATATGATAACATCGGCTAAGAATGCACAGGAAGATGATGATGACGACGAAGAAGAATTTGTTGTTAAGAAAGAGTCACCTTCACCATCCAGAGGCAATTTATCAGTAAAAGTCGATGGGAAAAGCAGTGATCAGAAGCCAAATACTCCACGCTCGAAGCACTCAGCAACAGAGCAAAGAAGAAGAAGCAAGATCAATGACAGATTTCTGAAGTTGAGAGAGATCATCCCTCACAGTGACCAGAAGAGAGATAAAGCATCATTCTTGCTGGAGGTTATCGAATATATTCAATTCCTACAAGAGAAAGTGCACAAATATGAGGGATCCTACCAAAGTTTGGATAGTCAACCTTCAACATTACCTTGGAATAAGTGCCATAGTATGGCTCAAGGTTTCATTGATCATTCTCAAGGCACAAACAGTGCATCTAGTCCTGCACTTATACGTGCTGCAAAGTTTGACGAGAACAAAATTGGAATCTCTGCTACAGGGCCTGTCACTGAACAGACACAAGAGCCAAACAGAACTTCCAGTGTGAAAGAAAGCAGTTTTCTGTCTGAATTGACAAACAGGGCCGCAACACTTTGTATGCAACCAAGCACATTTCCGTTTGGTGGACATACTAGCATAGCATCGCTAAAGTCAATACTGGCACCTGATGCTGGCTCGTTGGAACTGAAATCTCAGCCTCAATGTCCATCAAACAGATTGAATATGGCTAATTATGCTGTTACAAATGACAAGCTAAAAGGTCAAGAGGTTTCTACAGAAAGTGGTACGCTCAGCATCTCCAGTGTCTATTCTCAAAGATTGATGAACACACTGAAACAAGCATTGCAGAGTTCCGGAGTAGACTTGTCACAAGCCAACATGTCAGTGCAAATTGATCTCGCCAAAAGAGCTGATGATAGATCAAATGCTTCAACATCCAATTTTAAGGGTGACAACATTTCCTCAAGAAATCAACCAACTCCACTATTCATTGATACAAGCACAAGAGAGGAGTCTGTCCATGCCTTCAAACGGCTCAAAACAAGTTAAAACCAAATTTAACACACAAAAGTTTCTTTTGCAATTTATTCAACTTAAAAAATTTCCTTCCCCTTCTGATTCTGAAGGGATATTCATGTATACATCTGGTATAGAAAATCTCCCCTTATCAGATCATAAGCTACTGTAAATGTAATTCATTTTTTTTTCCTTTTCGATTGTTTGGCTGCACAGAATTCGATATTTATTACTTGTAGTGAACTATCAAGAAATCATGTATCACTATTGAGGCTTCCATGCTCATGTTGAGAAGCTGCTTTTTAATACAATTCTTCCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g069370.2.1SL2.50ch06:43120670..43125190550+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g069370.2SL2.50ch06:43120671..431254774,807+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g069370.2.1.1SL2.50ch06:43120671..4312070737+n/a
exonexon:Solyc06g069370.2.1.10SL2.50ch06:43124875..43125004130+1
exonexon:Solyc06g069370.2.1.11SL2.50ch06:43125089..43125477389+n/a
exonexon:Solyc06g069370.2.1.2SL2.50ch06:43120838..4312090669+2
exonexon:Solyc06g069370.2.1.3SL2.50ch06:43122134..43122487354+2
exonexon:Solyc06g069370.2.1.4SL2.50ch06:43122704..43122818115+2
exonexon:Solyc06g069370.2.1.5SL2.50ch06:43122914..43123041128+1
exonexon:Solyc06g069370.2.1.6SL2.50ch06:43123125..43123233109+2
exonexon:Solyc06g069370.2.1.7SL2.50ch06:43123585..4312365470+1
exonexon:Solyc06g069370.2.1.8SL2.50ch06:43123734..4312382693+n/a
exonexon:Solyc06g069370.2.1.9SL2.50ch06:43124228..43124670443+n/a
intronintron:Solyc06g069370.2.1.1SL2.50ch06:43120708..43120837n/a+n/a
intronintron:Solyc06g069370.2.1.10SL2.50ch06:43125005..43125088n/a+n/a
intronintron:Solyc06g069370.2.1.2SL2.50ch06:43120907..43122133n/a+n/a
intronintron:Solyc06g069370.2.1.3SL2.50ch06:43122488..43122703n/a+n/a
intronintron:Solyc06g069370.2.1.4SL2.50ch06:43122819..43122913n/a+n/a
intronintron:Solyc06g069370.2.1.5SL2.50ch06:43123042..43123124n/a+n/a
intronintron:Solyc06g069370.2.1.6SL2.50ch06:43123234..43123584n/a+n/a
intronintron:Solyc06g069370.2.1.7SL2.50ch06:43123655..43123733n/a+n/a
intronintron:Solyc06g069370.2.1.8SL2.50ch06:43123827..43124227n/a+n/a
intronintron:Solyc06g069370.2.1.9SL2.50ch06:43124671..43124874n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17854893%2Fdetails feature 17854893
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