Solanum lycopersicum mRNA Solyc06g069430.2.1
 mRNA details
|
| Name | Type |
Length
1,163
|
Organism |
|
Description
MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box
|
|
Location(s)
SL2.50ch06:43174749..43182943
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| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- Length
- 8195
- Sifter term
- GO:0046982
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g069430.2.1 MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box
CACATAACAAATAATCCATCTTCTCTGTCCAATGAAAAATCGACAACACATTTGACGAAACCACTCTGGTTTTTTAAAAACCACTATATTCTCTCTCTTCCACATCTGGGATATTTTGCCCAACAAAAGTTATTTCAGATACCAAACAGAGAAACACTACTCCACACCCTTCTTTTTTTTTCTTCCGTCTGTCTCCATTTGATATGATATATATATTACAACAACAATTATTCATAGTATAGAAAAAATATCCGAAAAAATGGGAAGAGGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGATCTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATACTTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTTAAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCACCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGCAGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTTTTGCCACAACAACTGGACTCTCCTCACCTTGGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGAAGTGGAAGGAGGTAGTTCTTCACAGCAGCAAGGTGCAGCTAATAATACTGTGATGCCACAATGGATGCTTCGTCATCTTAATAATTAAAAGGTATCATTAATACTTCAATATAATAATTAACTAGGTATATAATTTTGATGCCACAATATATTGTCTATGTGTACTTGCTTTCAAAGACATGCCACAATATAGATGGATTGTTGTAAAAACATTATAATATATGTTAAAAATAAATTTTGATGTATGATTCCAT
CACATAACAAATAATCCATCTTCTCTGTCCAATGAAAAATCGACAACACATTTGACGAAACCACTCTGGTTTTTTAAAAACCACTATATTCTCTCTCTTCCACATCTGGGATATTTTGCCCAACAAAAGTTATTTCAGATACCAAACAGAGAAACACTACTCCACACCCTTCTTTTTTTTTCTTCCGTCTGTCTCCATTTGATATGATATATATATTACAACAACAATTATTCATAGTATAGAAAAAATATCCGAAAAAATGGGAAGAGGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGATCTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATACTTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTTAAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCACCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGCAGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTTTTGCCACAACAACTGGACTCTCCTCACCTTGGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGAAGTGGAAGGAGGTAGTTCTTCACAGCAGCAAGGTGCAGCTAATAATACTGTGATGCCACAATGGATGCTTCGTCATCTTAATAATTAAAAGGTATCATTAATACTTCAATATAATAATTAACTAGGTATATAATTTTGATGCCACAATATATTGTCTATGTGTACTTGCTTTCAAAGACATGCCACAATATAGATGGATTGTTGTAAAAACATTATAATATATGTTAAAAATAAATTTTGATGTATGATTCCAT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g069430.2.1 | SL2.50ch06:43174979..43182684 | 246 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g069430.2 | SL2.50ch06:43174749..43182943 | 8,195 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g069430.2.1.1 | SL2.50ch06:43182500..43182943 | 444 | - | 1 |
| exon | exon:Solyc06g069430.2.1.2 | SL2.50ch06:43177322..43177400 | 79 | - | n/a |
| exon | exon:Solyc06g069430.2.1.3 | SL2.50ch06:43177159..43177223 | 65 | - | 1 |
| exon | exon:Solyc06g069430.2.1.4 | SL2.50ch06:43176963..43177062 | 100 | - | n/a |
| exon | exon:Solyc06g069430.2.1.5 | SL2.50ch06:43176837..43176878 | 42 | - | n/a |
| exon | exon:Solyc06g069430.2.1.6 | SL2.50ch06:43176290..43176331 | 42 | - | n/a |
| exon | exon:Solyc06g069430.2.1.7 | SL2.50ch06:43176125..43176222 | 98 | - | 1 |
| exon | exon:Solyc06g069430.2.1.8 | SL2.50ch06:43174955..43175106 | 152 | - | n/a |
| exon | exon:Solyc06g069430.2.1.9 | SL2.50ch06:43174749..43174889 | 141 | - | n/a |
| intron | intron:Solyc06g069430.2.1.2 | SL2.50ch06:43177401..43182499 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.3 | SL2.50ch06:43177224..43177321 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.4 | SL2.50ch06:43177063..43177158 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.5 | SL2.50ch06:43176879..43176962 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.6 | SL2.50ch06:43176332..43176836 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.7 | SL2.50ch06:43176223..43176289 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.8 | SL2.50ch06:43175107..43176124 | n/a | - | n/a |
| intron | intron:Solyc06g069430.2.1.9 | SL2.50ch06:43174890..43174954 | n/a | - | n/a |
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