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Solanum lycopersicum mRNA Solyc06g069600.1.1

mRNA details  
Name
Solyc06g069600.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc06g069600.1.1
Length
1,245
  
Description
Transcription factor EB (AHRD V1 *-*- TFEB_MOUSE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch06:43345470..43347563
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2094
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g069600.1.1 Transcription factor EB (AHRD V1 *-*- TFEB_MOUSE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGAGTCATCATACTTGGAATTTTAGTCACCAAAAACAAGAACAACAAGTAGTAGAAAAAGAAGAAGAGGAGAACAGATATACTCGTGGCCACGTGCATAATCAGCAGAATCAAGTTGACCCCATGTCCAATAAGTGTGAAGTTGCAGAGTTAACATGGGAAAATGGGCAAGTAGCCATGCATAGACTCGGAAGCAACCTCTCGAATGAGCAAACAAAACACACATGGGGAAAGGCTGGTGACACACTAGAGTCAATTGTGCATCAAGCCACTTTCCAAAAACAACATCATAGTTATATAATGGGAAGTGATGGACAAAATCAGGCAAACATCAACAGGGAAAAAAATGTATCTTATGGTGCTCAACAAACAAGAGGAGTATTAAAGAGGATGAGATCATCAGATTCTGACCCCCAGTTATATATTGGTGGAATATCATTAGAACATTTAAACGCTCGTGCAAGTGCTAAGGACAATGATATCACCATGATAACATGGCCTTGTAATGAGGATTCTGCCTGCCATGGTGGCTCGGAAAACAAAGAGGAAGAACGTGAAACAAAAAGCTCCAACCCATCAAAACGTAGTCGAAGAGCTGCTGTCCACAACCAATCAGAGCGGAGACGCCGTGACAGAATCAATGAAAAGATGAAAGCTCTGCAGAAGTTGGTGCCAAATGCTAGTAAGACAAATAAAGCATCCATGCTGGAGGAAGTGATAAAGTACTTAAAACAGCTTCAAGCACAAATCCAGTTGATAAGCTATGCTAAAAACATGGAGCAGCAAATGATGATGATGTCTCTAGGAATGCAACCAGCACATATTCAAATGCCTTTACTAGCAACAATGGGCATGTGTAGTAGTACTACAGGAATACTTAACAATATGACTTCTAATTTAGCTCCAGCTCCTTATCAATCTCTTATAGGCGGCCGCGCTCCCCTCATTTATCCAACCTCTTCAATGCCCACTCTTTTTCCTCCCTTCATGTCACCACCCTTCGCCACGGCATCATCCATTCCTAGTACTCCACCACAACCTATTAACGCCGAATCCATCAGCCCCAAACTCACTAAATATGCAGCTCCCCCTAATATTGCAGCCAGTACTTCATTCCCTTTTAGCCACCCCTATAATGCATATCTGCCTCATTCAATGAAGATGGAGTTCAATAATGAGATGGCAGCTCAATATCTGCAGCGGGGCAATCAAGAAAATGTCAATATTCAAGGGCAAAAAAAATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g069600.1.1SL2.50ch06:43345469..43347563415+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g069600.1SL2.50ch06:43345470..433475632,094+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g069600.1.1.1SL2.50ch06:43345470..43345594125+n/a
exonexon:Solyc06g069600.1.1.2SL2.50ch06:43345678..43346086409+1
exonexon:Solyc06g069600.1.1.3SL2.50ch06:43346375..4334646187+n/a
exonexon:Solyc06g069600.1.1.4SL2.50ch06:43346632..4334669766+n/a
exonexon:Solyc06g069600.1.1.5SL2.50ch06:43346813..43347277465+n/a
exonexon:Solyc06g069600.1.1.6SL2.50ch06:43347471..4334756393+n/a
intronintron:Solyc06g069600.1.1.1SL2.50ch06:43345595..43345677n/a+n/a
intronintron:Solyc06g069600.1.1.2SL2.50ch06:43346087..43346374n/a+n/a
intronintron:Solyc06g069600.1.1.3SL2.50ch06:43346462..43346631n/a+n/a
intronintron:Solyc06g069600.1.1.4SL2.50ch06:43346698..43346812n/a+n/a
intronintron:Solyc06g069600.1.1.5SL2.50ch06:43347278..43347470n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17855266%2Fdetails feature 17855266
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