Solanum lycopersicum mRNA Solyc06g073180.2.1

mRNA details  
Name
Solyc06g073180.2.1
Type
mRNA
Length
1,313
Organism
Solanum lycopersicum
Description
Zinc finger protein CONSTANS-LIKE 1 (AHRD V1 *--- COL1_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box
Location(s)
SL2.50ch06:45089788..45093131
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005622
Length
3344
Nb exon
4
Sifter term
  • GO:0003700
  • GO:0019904
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g073180.2.1 Zinc finger protein CONSTANS-LIKE 1 (AHRD V1 *--- COL1_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box

ATCCACACAAATCTCCCTCTTCCACTCATTTCATTGTCTATATTCTTCTTCTTTTCTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAAGATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAATCAGTAAAAAACCAACTGCAGCCACAACCACCTCAGCAGAATTCCCAACAAGTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAGAAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTACATTTCGCCTCCTTGACTCTACCCTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g073180.2.1SL2.50ch06:45090143..45092735234+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g073180.2SL2.50ch06:45089788..450931313,344+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g073180.2.1.1SL2.50ch06:45089788..45090326539+n/a
exonexon:Solyc06g073180.2.1.2SL2.50ch06:45091837..45092145309+n/a
exonexon:Solyc06g073180.2.1.3SL2.50ch06:45092526..45092978453+n/a
exonexon:Solyc06g073180.2.1.4SL2.50ch06:45093120..4509313112+n/a
intronintron:Solyc06g073180.2.1.1SL2.50ch06:45090327..45091836n/a+n/a
intronintron:Solyc06g073180.2.1.2SL2.50ch06:45092146..45092525n/a+n/a
intronintron:Solyc06g073180.2.1.3SL2.50ch06:45092979..45093119n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17858350%2Fdetails feature 17858350
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