Solanum lycopersicum mRNA Solyc06g073390.2.1

mRNA details  
Name
Solyc06g073390.2.1
Type
mRNA
Length
1,475
Organism
Solanum lycopersicum
Description
Farnesyltransferase/type I geranylgeranyltransferase alpha subunit (AHRD V1 **** Q6EZ49_CATRO); contains Interpro domain(s) IPR008940 Protein prenyltransferase
Location(s)
SL2.50ch06:45226610..45231999
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0018346
Length
5390
Nb exon
5
Sifter term
GO:0004660
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g073390.2.1 Farnesyltransferase/type I geranylgeranyltransferase alpha subunit (AHRD V1 **** Q6EZ49_CATRO); contains Interpro domain(s) IPR008940 Protein prenyltransferase

CGGAAAAACATATAACAATATTTGAATAAGCATTTAGTCATGTGATATGGGATATGGAATCTAGACTTTATAGTTCCTTTTATAATTGAAATACGTTAATATTAATTCTATATTCCTGCTACCCCGAAGGCAATTCCAGTATTGAACTACCGCCGGCAGTTTTCCGATCGGATCCCGGAGCCGAGTATCAAATGGACAGTTGTGAGGTGACGAAAACGCGAATTCCTTTCAAGGAAAGGCCCGACTGGGCCGATGTGAAGCCCGTTCCGCAAGACGACGGGCCCTGCCCGGTTGTTCCCATAGCCTACACAGAAGACTTCTCTGAAACCATGGACTACTTCCGGGCAATTTACGTAGCCGATGAGCGATCTACACGCGCCCTCCAGCTTACTGGTGAAGCTATTCAGCTAAACCCTGGAAATTACACTGTATGGCAATTTAGGCGTGTTGTGCTGGAGGCATTGGGTGTTGATTTACGTGAAGAATTGAAGTTTGTTGATCGCATTGCTGGGGAGAATACCAAAAATTATCAAATATGGCATCATAGACGGTGGCTTGCTGAGAAGCTGGGAGCTGATGCTGTGACAAATGAGCTAGAATTCACCAAGAAAATATTTTCTCAGGATGCAAAAAATTATCATGCTTGGTCCCATCGGCAGTGGGTCCTTCAAGCACTTGGAGGATGGGAAGATGAGCTTGCTTATTGTCAACAACTCCTTGAAGATGATATTTACAACAATTCTGCTTGGAATCAGAGATACTTTGTCGTAACACGATCACCTCTACTAGGGGGCCTAGTGGCAATGAGGGAATTGGAAGTGAATTACACAGTTCAAGCCATCAGAGCTAGTCCAGAGAATGAAAGTCCTTGGAGGTATCTTCGTGGTCTTTACAAGAATGATACACAATCTCTAGTTCAGGATTCTCAAGTAGCATCAGTACTTTTGGACGTCTTAACCTCCCAAAATAGTCATGTGCACGCTCTGAGGTTCTTGTTGGATCTTCTTTGTCATGATTTTGAACCGAGCCAAGAATTGAAAAGTGCTGTAGATGTTCTTACTCCCCAGTCATGCTCACCAGATTTAGCACTGACAAAGAAAATTTGTTCCATCTTGGAACATGCTGATCCAATGAGAGTAAAATATTGGAATTGGCGCAAGAGCATGGTTCGGGTTCAATTACTTCAGAGTCAGAATGCAGAGAGGTTGGCTAATTTGAGTGTTCAAGAATGACTTGTGAGAATATTGTACTGTGTTTACGAAATACATACTTGCATCTAAGGTGATCCTTCGGGCACATGTGCTGGGAAGTGACTGAATATCACGAAGAACTAAAAAAACTGTGATTGGCAACATTGTACTACTCAAAATAGGTCACTTTCGATGACTTTTTGTACTGCCTTGAGTTTTGGCTCTGCTATGTTTTGTAAGTTTTGGATATGGATGCATAGCTTATTGATACTTTTGGTGACTTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g073390.2.1SL2.50ch06:45226800..45231756347+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g073390.2SL2.50ch06:45226610..452319995,390+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g073390.2.1.1SL2.50ch06:45226610..45227037428+n/a
exonexon:Solyc06g073390.2.1.2SL2.50ch06:45227561..45227670110+n/a
exonexon:Solyc06g073390.2.1.3SL2.50ch06:45228905..45229025121+n/a
exonexon:Solyc06g073390.2.1.4SL2.50ch06:45230423..4523051896+1
exonexon:Solyc06g073390.2.1.5SL2.50ch06:45231280..45231999720+n/a
intronintron:Solyc06g073390.2.1.1SL2.50ch06:45227038..45227560n/a+n/a
intronintron:Solyc06g073390.2.1.2SL2.50ch06:45227671..45228904n/a+n/a
intronintron:Solyc06g073390.2.1.3SL2.50ch06:45229026..45230422n/a+n/a
intronintron:Solyc06g073390.2.1.4SL2.50ch06:45230519..45231279n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17858619%2Fdetails feature 17858619
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