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Solanum lycopersicum mRNA Solyc06g073530.1.1

mRNA details  
Name
Solyc06g073530.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc06g073530.1.1
Length
2,715
  
Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch06:45327152..45332126
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
4975
Nb exon
22
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g073530.1.1 Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

ATGGCTGAACAAGAGTATGGTGGATCCACAGAGGCTCTGCCCCCTCCTCCCCCTGTTCCACTTGATTTCTCTCCAGAAAAAGCTGAACCAGCGCCGGTGGAGAAAAAGTTATTACGTGTTCCCATGGCTAGGCGTGGCCTTGGAAAGAAGGGACGCAATATTCAGATCCTTACCAATCATTTTCAAGTGAACGTATCTAATGTTGACGGACACTTCTTTCATTACAGTGTTGCTCTATTTTACGAGGATGGTCAACCTGTCGAGGTTAAAGGAATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATCATGCAGAATTGGCTGGGAAGGGTTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATTGGTTCATTACCTAGAAGTAGATTCGAGTTCACGGTTGTACTAAATGACATAACATCTAACCGGAACGTTGGAACCTCCAGCCCTCCTAATGAAGCTGATAGGAAAAGATTAAGGCGGCCGTATCAATCTAAAACTTATAAGGTGAAGATTAGCTTAGCTGGCAAGATTCCGATGCAGGCAATTGCAAATGCTTTTCGAGGTCAAGAGTATGAGAACTCTCAAGAAGCCTTACGAGTTCTGGATATAATTTTAAGGCAGCATGCTGCAAAAAAGGATTGCTTACTCGTTCGTCAATCCTTTTTCCATAATGACTCAAATAACTTCGTTGATGTTGGAGGTGGTGTTCATGGCTTGAGAGGGTTCCATTCAAGTTTTCGAACCACTCAGTCTGGATTGTCTTTGAACATTGATATGTCTACCACAATGATAATAAAGCCTGGGCCAGTGCTTGACTTCTTGATAGCAAATCAAAATTCAAGAGATTCCGTTTCACTTGATTGGGCGAAGGCAAAACGCGTGTTGAAGAATTTGAAAGTGCAGACTGCTACCTCTAACCAAGAATTCAAAATAACTGGATTGAGTGAAAAATCTTGCCGTGAGCAGACGTTTATTCTAAAGCGAAGGAGCAAAGATGAGGATTGTGAAGTGCAAACTTCAGAAGTGACAGTTTACGATTACTTTGTTAATCATTGTAACATAGACTTGCGATATTCTGCTGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAGCTCTGCACTTTGGTCTCATTACAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCCATGCTCTCAAAATGAACAATTATGATGCTGAGCCTCTGCTTCATTCTTGTGGTGTCACGATCAATAGCGACTTCACTCAGATTGAAGGGCGTGTGCTGTCTGCCCCTGAGTTGAAGGCAGGAAATGGAGTTGATATTTTCGCGCAAAGTGGCAGGTGGAACTTTAATAATAAGAGATTCTTTGAATCAGCAAAGGTAGAGAAATGGGCTGTTGTGAACTTCTCTACAAACTGTGATATCGGCAAACTAGTCGAATGTTTGACAGGACTTGGAGAGACGAAAGGAATTAGTGTGGAAGCTCCATTGAAAGTGTTTGAAGAGTCTCGACATCATAGAAGGGCTCCTCCTGTTGGCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGACGCCCCAAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGACCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTGACAAACCTTCTCCTTAAGATCAATGCTAAGCTCGGTGGTTTAAATTCTATGTTAGCTGTTGAGGTTTCTCGTTCCATCCCCATGATATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCAGTTGTGAGTTCAAGGCAGTGGCCTTCAATATCTCATTACAGAGCTTCTGTGCGCACTCAATCTCCTAAAGTGGAGATAATTGATAACATATTTAAAGAAGTTTCAGACACTAGAGACGATGGGATTATGAGGGAACTTTTGCTAGATTTTCATGCGAGTTCCCAACAAAGGAAGCCTCAGCAAATCCTAGTATTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGATCATTGAGGCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCACAGAAAAATCATCATACAAAGTTTTTCCCGTATGGATCTGCTAATAATGTTCCACCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGGTGGAATGATTGGTACGACTCGACCTACACATTACCATGTGTTGTTAGATGAAGTTGGTTTCAAACCTGATGAACTTCAAGAACTTGTTCATAATCTGTGCTATGTGTACCAGAGAAGCACTACTGCAACATCCATTGTGGCTCCGATAGGCTATGCCCATTTAGCCGCTGCACAGGTTGGACAGTGGATGAAATCCGAGGGCACATCAGAGACATCATCAAGCCAGGATGGTCTGAGAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCAGACTTCAGAAGAATGTTGCTAGCTCCATGTTCTTCTGTTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g073530.1.1SL2.50ch06:45327151..45332126905+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g073530.1SL2.50ch06:45327152..453321264,975+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g073530.1.1.1SL2.50ch06:45327152..45327379228+n/a
exonexon:Solyc06g073530.1.1.10SL2.50ch06:45329252..4532931463+n/a
exonexon:Solyc06g073530.1.1.11SL2.50ch06:45329479..45329592114+n/a
exonexon:Solyc06g073530.1.1.12SL2.50ch06:45329667..45329832166+n/a
exonexon:Solyc06g073530.1.1.13SL2.50ch06:45329917..45330029113+2
exonexon:Solyc06g073530.1.1.14SL2.50ch06:45330133..45330270138+n/a
exonexon:Solyc06g073530.1.1.15SL2.50ch06:45330349..45330479131+n/a
exonexon:Solyc06g073530.1.1.16SL2.50ch06:45330661..4533072666+1
exonexon:Solyc06g073530.1.1.17SL2.50ch06:45331072..4533113564+1
exonexon:Solyc06g073530.1.1.18SL2.50ch06:45331224..45331335112+n/a
exonexon:Solyc06g073530.1.1.19SL2.50ch06:45331406..4533147974+2
exonexon:Solyc06g073530.1.1.2SL2.50ch06:45327456..45327661206+n/a
exonexon:Solyc06g073530.1.1.20SL2.50ch06:45331572..4533166695+n/a
exonexon:Solyc06g073530.1.1.21SL2.50ch06:45331774..4533180532+1
exonexon:Solyc06g073530.1.1.22SL2.50ch06:45331951..45332126176+2
exonexon:Solyc06g073530.1.1.3SL2.50ch06:45327744..45327953210+1
exonexon:Solyc06g073530.1.1.4SL2.50ch06:45328031..45328167137+1
exonexon:Solyc06g073530.1.1.5SL2.50ch06:45328246..4532834398+2
exonexon:Solyc06g073530.1.1.6SL2.50ch06:45328410..4532850798+n/a
exonexon:Solyc06g073530.1.1.7SL2.50ch06:45328615..45328783169+1
exonexon:Solyc06g073530.1.1.8SL2.50ch06:45328868..45328984117+n/a
exonexon:Solyc06g073530.1.1.9SL2.50ch06:45329062..45329169108+n/a
intronintron:Solyc06g073530.1.1.1SL2.50ch06:45327380..45327455n/a+n/a
intronintron:Solyc06g073530.1.1.10SL2.50ch06:45329315..45329478n/a+n/a
intronintron:Solyc06g073530.1.1.11SL2.50ch06:45329593..45329666n/a+n/a
intronintron:Solyc06g073530.1.1.12SL2.50ch06:45329833..45329916n/a+n/a
intronintron:Solyc06g073530.1.1.13SL2.50ch06:45330030..45330132n/a+n/a
intronintron:Solyc06g073530.1.1.14SL2.50ch06:45330271..45330348n/a+n/a
intronintron:Solyc06g073530.1.1.15SL2.50ch06:45330480..45330660n/a+n/a
intronintron:Solyc06g073530.1.1.16SL2.50ch06:45330727..45331071n/a+n/a
intronintron:Solyc06g073530.1.1.17SL2.50ch06:45331136..45331223n/a+n/a
intronintron:Solyc06g073530.1.1.18SL2.50ch06:45331336..45331405n/a+n/a
intronintron:Solyc06g073530.1.1.19SL2.50ch06:45331480..45331571n/a+n/a
intronintron:Solyc06g073530.1.1.2SL2.50ch06:45327662..45327743n/a+n/a
intronintron:Solyc06g073530.1.1.20SL2.50ch06:45331667..45331773n/a+n/a
intronintron:Solyc06g073530.1.1.21SL2.50ch06:45331806..45331950n/a+n/a
intronintron:Solyc06g073530.1.1.3SL2.50ch06:45327954..45328030n/a+n/a
intronintron:Solyc06g073530.1.1.4SL2.50ch06:45328168..45328245n/a+n/a
intronintron:Solyc06g073530.1.1.5SL2.50ch06:45328344..45328409n/a+n/a
intronintron:Solyc06g073530.1.1.6SL2.50ch06:45328508..45328614n/a+n/a
intronintron:Solyc06g073530.1.1.7SL2.50ch06:45328784..45328867n/a+n/a
intronintron:Solyc06g073530.1.1.8SL2.50ch06:45328985..45329061n/a+n/a
intronintron:Solyc06g073530.1.1.9SL2.50ch06:45329170..45329251n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17858793%2Fdetails feature 17858793
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