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Solanum lycopersicum mRNA Solyc06g073540.2.1

mRNA details  
Name
Solyc06g073540.2.1
Type
mRNA
Length
3,081
Organism
Solanum lycopersicum
Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch06:45335577..45341404
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
5828
Nb exon
22
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g073540.2.1 Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

GAAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTGACGTGTCTACCACTATGATAATCCAACCTGGGCCTGTGGTCGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCAAAGGCAAAACGCGTGTTGAAGAACCTGCGAGTGAAGACTGCTCCCGCTAACCAAGAATTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGATGTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAGCTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAATGCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAGTTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAGAGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATTAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTACCAAAGAAGCACTACTGCTATATCCATTGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g073540.2.1SL2.50ch06:45335589..45341078914+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g073540.2SL2.50ch06:45335577..453414045,828+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g073540.2.1.1SL2.50ch06:45335577..45335817241+n/a
exonexon:Solyc06g073540.2.1.10SL2.50ch06:45337865..4533792763+n/a
exonexon:Solyc06g073540.2.1.11SL2.50ch06:45338105..45338218114+n/a
exonexon:Solyc06g073540.2.1.12SL2.50ch06:45338295..45338460166+n/a
exonexon:Solyc06g073540.2.1.13SL2.50ch06:45338547..45338659113+n/a
exonexon:Solyc06g073540.2.1.14SL2.50ch06:45338763..45338900138+2
exonexon:Solyc06g073540.2.1.15SL2.50ch06:45338979..45339109131+n/a
exonexon:Solyc06g073540.2.1.16SL2.50ch06:45339643..4533970866+n/a
exonexon:Solyc06g073540.2.1.17SL2.50ch06:45340085..4534014864+1
exonexon:Solyc06g073540.2.1.18SL2.50ch06:45340237..45340348112+1
exonexon:Solyc06g073540.2.1.19SL2.50ch06:45340425..4534049874+n/a
exonexon:Solyc06g073540.2.1.2SL2.50ch06:45335916..45336121206+n/a
exonexon:Solyc06g073540.2.1.20SL2.50ch06:45340591..4534068595+2
exonexon:Solyc06g073540.2.1.21SL2.50ch06:45340789..4534082032+n/a
exonexon:Solyc06g073540.2.1.22SL2.50ch06:45340903..45341404502+1
exonexon:Solyc06g073540.2.1.3SL2.50ch06:45336203..45336439237+n/a
exonexon:Solyc06g073540.2.1.4SL2.50ch06:45336614..45336750137+1
exonexon:Solyc06g073540.2.1.5SL2.50ch06:45336827..4533692498+1
exonexon:Solyc06g073540.2.1.6SL2.50ch06:45337002..4533709998+2
exonexon:Solyc06g073540.2.1.7SL2.50ch06:45337225..45337393169+n/a
exonexon:Solyc06g073540.2.1.8SL2.50ch06:45337478..45337594117+1
exonexon:Solyc06g073540.2.1.9SL2.50ch06:45337672..45337779108+n/a
intronintron:Solyc06g073540.2.1.1SL2.50ch06:45335818..45335915n/a+n/a
intronintron:Solyc06g073540.2.1.10SL2.50ch06:45337928..45338104n/a+n/a
intronintron:Solyc06g073540.2.1.11SL2.50ch06:45338219..45338294n/a+n/a
intronintron:Solyc06g073540.2.1.12SL2.50ch06:45338461..45338546n/a+n/a
intronintron:Solyc06g073540.2.1.13SL2.50ch06:45338660..45338762n/a+n/a
intronintron:Solyc06g073540.2.1.14SL2.50ch06:45338901..45338978n/a+n/a
intronintron:Solyc06g073540.2.1.15SL2.50ch06:45339110..45339642n/a+n/a
intronintron:Solyc06g073540.2.1.16SL2.50ch06:45339709..45340084n/a+n/a
intronintron:Solyc06g073540.2.1.17SL2.50ch06:45340149..45340236n/a+n/a
intronintron:Solyc06g073540.2.1.18SL2.50ch06:45340349..45340424n/a+n/a
intronintron:Solyc06g073540.2.1.19SL2.50ch06:45340499..45340590n/a+n/a
intronintron:Solyc06g073540.2.1.2SL2.50ch06:45336122..45336202n/a+n/a
intronintron:Solyc06g073540.2.1.20SL2.50ch06:45340686..45340788n/a+n/a
intronintron:Solyc06g073540.2.1.21SL2.50ch06:45340821..45340902n/a+n/a
intronintron:Solyc06g073540.2.1.3SL2.50ch06:45336440..45336613n/a+n/a
intronintron:Solyc06g073540.2.1.4SL2.50ch06:45336751..45336826n/a+n/a
intronintron:Solyc06g073540.2.1.5SL2.50ch06:45336925..45337001n/a+n/a
intronintron:Solyc06g073540.2.1.6SL2.50ch06:45337100..45337224n/a+n/a
intronintron:Solyc06g073540.2.1.7SL2.50ch06:45337394..45337477n/a+n/a
intronintron:Solyc06g073540.2.1.8SL2.50ch06:45337595..45337671n/a+n/a
intronintron:Solyc06g073540.2.1.9SL2.50ch06:45337780..45337864n/a+n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17858838%2Fdetails feature 17858838
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