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Solanum lycopersicum mRNA Solyc06g073840.2.1

mRNA details  
Name
Solyc06g073840.2.1
Type
mRNA
Length
2,351
Organism
Solanum lycopersicum
Description
Peptidyl-prolyl cis-trans isomerase D (AHRD V1 *--- PPID_HUMAN); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Location(s)
SL2.50ch06:45594206..45602783
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005488
  • GO:0006457
Length
8578
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g073840.2.1 Peptidyl-prolyl cis-trans isomerase D (AHRD V1 *--- PPID_HUMAN); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical

CGAGGGCTTCCACTTTACTTCTCCGCTAGGGAAAATATTACTTGGAAGATCCTTGTCGTTTCGAATTGCGATTTCTCTACTGGTAGGCGTCCAAAATCCAACTAATTACGACCATTCTTGTTCATCGCTCTCGTTTTTTTTCGGTTCAACAGATCGCTATCAAACGTAATCGCACATATACATATTTCTGATTGAAAATTTTGTTCAATTTGATTCGAAAATCGACGGATTTTACCTACAGATTCATCCGATTTCGCCTGATTTTGAATTGAGGATTCAAGGGAAGATCAGATTATTCGACTGTGTATTAGGCAGAATGTTTAACGGAATGATGGATCCTGAATTGATCAGAATGGCGCAAGAGCAGATGAGTCGCATGTCCCCGGCTGATTTGGCTCGGATGCAGCAGCAGATGATGTCTAATCCTGATTTAATGAGAATGGCTACTGAAGGCATGAAAAACATGAGGCCGGATGACTTAAAGGTTGCTGCAGAACAGTTGAAGCATACTCGTCCTGAGGATATGGCTGAGATTGGTAAAAAAATGGCTAATGCTTCACCTGAAGAAATAGCAGCAATGAGTGCCCAAATGGATGCTCAGGTTAAATATGAAATTAGCGGAGCTGAGTTCCTGAAGAAGCAGGGAAATGATCTTCACAGCCAGGGAAAGTTTAAGGAGGCCCTGCAGAAATATTCGCTTGCAAAGAAAAATCTGTCAAGCATTCCTGCCGCGAAAGGCAGGAGTATCTCATTGGCTTGTTCCTTGAACATGATGTCATGTTACTTAAAAACTGGACAATACGATGACTGCATAAAGGAAGGTAGTGAGGTTTTGACATATGACGACAAGAATATCAAAGCTCTTTATCGTAGGGGTCAAGCTTATAAAGAGCTGGGACAGTTAGAAGATGCAGTGTCTGATTTGAGTAAAGCACTTGAAGTCTCGCCTGATGATGACACTATTGCTGATGTCTTAAGGGGTGTCCAAGAAAGATTGGTGAAAGAAGGTGGTTCTTCAAGACGTAGAGGAGGATTGGTTATTGAAGAAATAATTGAAGAAGAACCATTAGTGTCTTCAGAAGCCGTGGATAATTCATTTCCAAAAAGTGTTGCGTCACAACCACGTGAATCGATCAGCCCTCCTAAGAGTCAAAATGAAATTCTTGGTGGGCCTCCCTTATCAAGTTCAGAGTCTTTGGAGGCTTTAAAAAATGACCCCGAATCCATGAGATCCTTCCAGAATTTTATTTCTCGCGCTGATCCAGACACACTATCTGCCTTAAGTGGTGGAAATGCCAAAGGCATACCTCCTGAAATGGTAAAGACAGCCTCCAATGTTATTGGCAAGATGTCACCAGAAGAACTACAAAGAATGGTCCGGTTGGCATCCTCCTTTCAAGGAGAAAATCCCTTTCTTAAAAAAGGTTCCTCAGATAGCTTTGGCCCTGGCTCAGTTCCTCCAAATGTGACACCCGACATGCTGAAAATGGCAACTGATATGATGGGCAAAATGTCTCCAGAAGACATGCAAAAGATGTTTACAATGGCATCTTCATTAAAAGAGAAAAGTCCAGTATCGGCTGCAACAACTATTGATTCTAATGGGTCAGGTCAGCAGTCAAAACCTCGTGACACTAGGGAAAATTTTAAAGTGGATGACAGTACAAGTGCAAGCACTTCATCACAGGGGTTTTCTGATTTAAATAATGGTTCTTACTCAAGCTTATCAAGTTCAAATGTTGATCTGCAAGAAGAAATGAGAAACCGAATGAAAGATCCAGCCATGAGACAGATGTTCTCTTCAATGATTAAAAATATGAGTCCAGAGATGATGTCTAACATGAGTGAACAATTTGGGGTGAAGCTCAGTCAGGCAGATGCAGAGAAAGCTCAACAGGCAATGTCATCTTTGTCACCAGATGACTTGGAAAAGATGATGAAGTGGGCTGATAGAATTCAAAGAGGAGTTGAAGGTGCGAAGAAGACAAAAAATTGGCTCTTAGGAAAACCTGGCATGATCTTGGCTATACTTGTGCTACTTTTAGCAGTCATCCTTCACAAGCTGGGCTTCATCGGGAGCTAAACTTGACGTTCTAGCCAAATATTAGCATGAAGAGTTGAGTAGAGTTTGGAATCCTTGTACTAATGTACTTGAAATGGGGATATCAGTGGGTAAACCTTGGTTGGAGATGACATTAGTTACTTTTGTTATATTACGCTTTTTTTTTCTTTCTTTATTTGGGTGTTTGTAGATGTAACTTAAACTTGACAAATTATTTAGTTCGCTGTTTTGCGGTAGAACTCGCCGTTTCTAGATGAAGTTTTGGTAAGACTACCCTTTACAAATTAAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g073840.2.1SL2.50ch06:45594521..45602515589+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g073840.2SL2.50ch06:45594206..456027838,578+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g073840.2.1.1SL2.50ch06:45594206..45594617412+n/a
exonexon:Solyc06g073840.2.1.10SL2.50ch06:45601489..45601632144+1
exonexon:Solyc06g073840.2.1.11SL2.50ch06:45602369..45602783415+n/a
exonexon:Solyc06g073840.2.1.2SL2.50ch06:45595154..45595384231+n/a
exonexon:Solyc06g073840.2.1.3SL2.50ch06:45595941..4559599757+n/a
exonexon:Solyc06g073840.2.1.4SL2.50ch06:45596086..45596214129+n/a
exonexon:Solyc06g073840.2.1.5SL2.50ch06:45596724..4559680178+n/a
exonexon:Solyc06g073840.2.1.6SL2.50ch06:45596918..4559698871+n/a
exonexon:Solyc06g073840.2.1.7SL2.50ch06:45597103..4559714644+n/a
exonexon:Solyc06g073840.2.1.8SL2.50ch06:45597238..45597445208+1
exonexon:Solyc06g073840.2.1.9SL2.50ch06:45598742..45599303562+2
intronintron:Solyc06g073840.2.1.1SL2.50ch06:45594618..45595153n/a+n/a
intronintron:Solyc06g073840.2.1.10SL2.50ch06:45601633..45602368n/a+n/a
intronintron:Solyc06g073840.2.1.2SL2.50ch06:45595385..45595940n/a+n/a
intronintron:Solyc06g073840.2.1.3SL2.50ch06:45595998..45596085n/a+n/a
intronintron:Solyc06g073840.2.1.4SL2.50ch06:45596215..45596723n/a+n/a
intronintron:Solyc06g073840.2.1.5SL2.50ch06:45596802..45596917n/a+n/a
intronintron:Solyc06g073840.2.1.6SL2.50ch06:45596989..45597102n/a+n/a
intronintron:Solyc06g073840.2.1.7SL2.50ch06:45597147..45597237n/a+n/a
intronintron:Solyc06g073840.2.1.8SL2.50ch06:45597446..45598741n/a+n/a
intronintron:Solyc06g073840.2.1.9SL2.50ch06:45599304..45601488n/a+n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17859350%2Fdetails feature 17859350
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