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Solanum lycopersicum mRNA Solyc06g074730.2.1

mRNA details  
Name
Solyc06g074730.2.1
Type
mRNA
Length
3,321
Organism
Solanum lycopersicum
Description
ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch06:46271455..46278053
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
6599
Nb exon
22
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g074730.2.1 ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

CTATCACTCTTTCATTATACTGAAATTCAACTTCTCTTCTTCTCATTACTCTTTTTCTCTCTCTCGTTAACAATGTCGGAACGTGGACGAGGACGTCGCGGTGGTTCTCCTTATGGTGGTGGCAGAGGCGGTGGACGAACACCTCCTTATGGTGGCGGCAGAGGCGATGGTCGAACACCTCCATATGGTGGCGGCAGAGGCGGTGGTCGAACATCTCCTTCCGATGGTCGTGGCAGAGGATATCAGTCTCCCGGTGGTCGTGGTCGAGGAACTTACTCCAGTGGCGGATCACCGAGTTACAATGCTCCTCCGATGTATCATCATCAACAACAGTCAATGGAGGTTTCATCGATGACTCGGGAGGTTGAACAGAAGCTTTCGCTTCAACCTTCCACATCTGCAAATCCTCCTGCTAGGCCTCAGCCCGCGCAACAGTCGTCACCGCCTGTACAGCCTCCTGTTGCTACCATCCCTGCACATCTAGCGGGACCGTCGACTTCGACGCAGCCGCCAAGGCCGCCACCGGTATCATCTAAAAGCATTCGGCCTCCTCCTAGACCGGATAACGGGAAGTTGGGGCGTAAGTGCGTAGTGAGGGCAAATCACTTTCTCGTTCAGGTTGCTGATCGAGATGTACATCACTATGATGTTACAATCAGTCCTGAGGTTCTGTCAAAGAAAGTGTGCCGACTGATAATCCAACAGCTGGTTAATAACTATAGACTTTCACACTTGGGTGGAAGGGGTTTAGCATATGATGGTCGAAAGAGTGCTTACACTGCTGGTGCGCTCCCATTCACCTCCAAGGAATTTGTTATCATTTTTGCTGATGATAATGGTGGACCAAGGAGGGAAAAGGAGTTTAAGGTCTCCATTAAGTTTGCCGCCAAAGCTGATATTCACCATTTGAAACAGTTCTTGCAAAGTAGGCAGTCAGATGTACCGCAAGAAACAATTCAAGCTTTAGATGTGGTGCTGCGGACAAACCCATCAGCAAAATATGAAGTAGTGGGAAGGTCGCTTTTCCACCATACGTTTGCAGGTGACGCTGGCTTGCTTACTGGTGGGTTGGAATACTGGAGAGGGTATTATCAGAGTCTTCGACCAACTCAGATGGGCCTTGCTCTCAATATTGATATGTCAGCCAGAGCATTCTATGAGTCCGTTTTTGTTTCTGATTACGTTTTGCGGCACTTGAATCTCAGGGATCATCCTCAGGTGTCGCTGTCTGATCAGGACCATTCAAAGGTTAGAAAGGTTTTAAAAGGTGTTAAGGTAGAAGCGACTCATCAAGGTAGACACTACAGGATCACAGGGTTGACTCCTAAATCATCGTCGCAAATGATGTTTCCTGTTGATGGTACTGACGGAATGATATCGGTGGAACAATACTTCAACACGAAGTACGAGATTGTACTAGCGTATCCTAGGTTGCCTGCGATTCAGTGTGGCAACAGTGCAAAGCCTGTATATCTGCCTATGGAGATTTGCAAAATTGTTCCTGGACAAAGATACACAAAAATGCTAAATGGCAGGCAGGTCACAGAGATGCTGAGGGCAACCTGTCAGAGACCAAAAGAAAGGCTAAATGGCATTCAGAATATTGTGAGGGTCAACAAGTATGCTGATGACGATTTGGTGCATGAATTTGGTATTGGAGTTGATGCACGCCTCACCACCATTGAAGCACGGGTTCTTAATCCTCCAACGCTAAGGTTTCATGCGTCTGGGAAAGAATCACGAGTGGATCCCAGGGTTGGTCAATGGAATATGATTGATAAGAAAATGATTAATCCGGCGCATGTATACTATTGGACGTGTGTTAGCTTCTCCCAACAGATCCCACCAGATAGGCTCGTCGATGGCCTGCACCGAATGTGCATTAGTAAAGGGATGACCTTCGATGCACCATTGGTGCCGTTCCGCCAAGCTCGTCCTGATCATATTGAGACGACTCTTCGTGATATCCATAGAGAATCTATGCAAGCGATAGATAGGTTGGGGGAGGATCTGAAAATAAAACATCTCCAGCTGTTACTTGTTATTCTTCCTGACGGTACTGGACAATATGGAAGGATCAAGCGTCTGTGTGAAATAGATTTGGGAATTGTTTCCCAATGTTGCCACCCAAAGAATTTACGACCCCCATCTATTGCATTTCTTGAAAACCTCTCTCTAAAGATAAATGTCAAGGTGGGTGGAAGAAACTCTGTTTTGGAGCTGGCAGTTAGTAAGAACATGCCTTTCCTCACCGATAAGACCACAATTGTCTTCGGTGCTGATGTGACACATCCGCAACCGGGAGAAGATTCTAGTCCCTCTATAGCAGCTGTGGTTGCATCAATGGATTGGCCTGAAGTTACTAAATATAGGGGTATTGTTTCTGCACAGCCCCATAGGCAAGAGATCATTATGGACTTGTACACGGAGAAGGAAGATTCTAAAAGGGGCGTTGTTCGCGGTGGAATGATAATGGACCTGCTGAAAGCGTTTTATGCCGCGACAAAAATTAAGCCTGACAGAATAATCTTCTATAGAGATGGAGTCAGCGAAGGACAATTCAATCAGGTTTTATTGGAAGAAATGGATGCGATCCGCAAGGCATGTGTTGCCCTGCAAAGTGATTATATGCCACGAGTTACCTTTGTGGTAGTGCAGAAGCGACATCATACACGTCTATTCCCTTCCAATCATGATGATCGTACTTTGACAGACAGGAGTGGAAATATTTTGCCAGGTACTGTGGTAGACACCAACATATGCCACCCAACTGAGTTTGATTTTTACTTATGTAGCCACGCTGGGATCAAGGGTACCAGTCGTCCTGCGCATTACCATGTACTGTATGATGAGAACAATTTCACCGCAGATGGCATTCAGAATGTAACGAACTACCTGTGCTACACGTACGTTAGGTGTACACGATCAGTTTCCTTAGTACCACCTGCCTACTATGCACATCTAGCTGCCTTTCGTGCACGCTATTACATGGAGAATGACGTGGATGTAAGAGCTGCTAATGAAGGTGGTGAGGGAGGAGCAGCAGCACAATTCAGGCAACTTCCTAAGATTCATGAAAATGTGTCGGAGGTCATGTTTTACTGCTGAAGAAGTATTCAGTAGAAATCTTCTTTTATGTTAAACTATTTTTTTTTAAGTTGGTCTGTGGGCTTTACAGATCATGGTTATGCTTTTTGCAACTGCACGTTGTGTGACGAAGTTATGATCACAGCTGACAGTAAATGTTCAATTATATTTTACTCTGTTCCTTTTTCGTACATTCAGTATTTTATGATATTTTACTCAAACGTCCATCCACTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g074730.2.1SL2.50ch06:46271526..462778401,012+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g074730.2SL2.50ch06:46271455..462780536,599+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g074730.2.1.1SL2.50ch06:46271455..46272102648+n/a
exonexon:Solyc06g074730.2.1.10SL2.50ch06:46275024..4627509572+n/a
exonexon:Solyc06g074730.2.1.11SL2.50ch06:46275419..46275532114+n/a
exonexon:Solyc06g074730.2.1.12SL2.50ch06:46275606..46275780175+n/a
exonexon:Solyc06g074730.2.1.13SL2.50ch06:46275899..46276020122+n/a
exonexon:Solyc06g074730.2.1.14SL2.50ch06:46276111..46276248138+2
exonexon:Solyc06g074730.2.1.15SL2.50ch06:46276356..46276498143+n/a
exonexon:Solyc06g074730.2.1.16SL2.50ch06:46276569..4627663163+n/a
exonexon:Solyc06g074730.2.1.17SL2.50ch06:46276716..4627677964+1
exonexon:Solyc06g074730.2.1.18SL2.50ch06:46276964..46277099136+1
exonexon:Solyc06g074730.2.1.19SL2.50ch06:46277213..4627728674+n/a
exonexon:Solyc06g074730.2.1.2SL2.50ch06:46272706..46272905200+n/a
exonexon:Solyc06g074730.2.1.20SL2.50ch06:46277362..4627745695+2
exonexon:Solyc06g074730.2.1.21SL2.50ch06:46277547..4627757832+n/a
exonexon:Solyc06g074730.2.1.22SL2.50ch06:46277671..46278053383+1
exonexon:Solyc06g074730.2.1.3SL2.50ch06:46273062..46273211150+n/a
exonexon:Solyc06g074730.2.1.4SL2.50ch06:46273294..46273430137+1
exonexon:Solyc06g074730.2.1.5SL2.50ch06:46273568..46273680113+1
exonexon:Solyc06g074730.2.1.6SL2.50ch06:46273900..4627399798+2
exonexon:Solyc06g074730.2.1.7SL2.50ch06:46274370..46274508139+n/a
exonexon:Solyc06g074730.2.1.8SL2.50ch06:46274606..46274722117+1
exonexon:Solyc06g074730.2.1.9SL2.50ch06:46274829..46274936108+n/a
intronintron:Solyc06g074730.2.1.1SL2.50ch06:46272103..46272705n/a+n/a
intronintron:Solyc06g074730.2.1.10SL2.50ch06:46275096..46275418n/a+n/a
intronintron:Solyc06g074730.2.1.11SL2.50ch06:46275533..46275605n/a+n/a
intronintron:Solyc06g074730.2.1.12SL2.50ch06:46275781..46275898n/a+n/a
intronintron:Solyc06g074730.2.1.13SL2.50ch06:46276021..46276110n/a+n/a
intronintron:Solyc06g074730.2.1.14SL2.50ch06:46276249..46276355n/a+n/a
intronintron:Solyc06g074730.2.1.15SL2.50ch06:46276499..46276568n/a+n/a
intronintron:Solyc06g074730.2.1.16SL2.50ch06:46276632..46276715n/a+n/a
intronintron:Solyc06g074730.2.1.17SL2.50ch06:46276780..46276963n/a+n/a
intronintron:Solyc06g074730.2.1.18SL2.50ch06:46277100..46277212n/a+n/a
intronintron:Solyc06g074730.2.1.19SL2.50ch06:46277287..46277361n/a+n/a
intronintron:Solyc06g074730.2.1.2SL2.50ch06:46272906..46273061n/a+n/a
intronintron:Solyc06g074730.2.1.20SL2.50ch06:46277457..46277546n/a+n/a
intronintron:Solyc06g074730.2.1.21SL2.50ch06:46277579..46277670n/a+n/a
intronintron:Solyc06g074730.2.1.3SL2.50ch06:46273212..46273293n/a+n/a
intronintron:Solyc06g074730.2.1.4SL2.50ch06:46273431..46273567n/a+n/a
intronintron:Solyc06g074730.2.1.5SL2.50ch06:46273681..46273899n/a+n/a
intronintron:Solyc06g074730.2.1.6SL2.50ch06:46273998..46274369n/a+n/a
intronintron:Solyc06g074730.2.1.7SL2.50ch06:46274509..46274605n/a+n/a
intronintron:Solyc06g074730.2.1.8SL2.50ch06:46274723..46274828n/a+n/a
intronintron:Solyc06g074730.2.1.9SL2.50ch06:46274937..46275023n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17860335%2Fdetails feature 17860335
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