Solanum lycopersicum mRNA Solyc06g083170.2.1

mRNA details  
Name
Solyc06g083170.2.1
Type
mRNA
Length
1,572
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch06:48705035..48707756
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2722
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g083170.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGATAATGACTGCTTCTCTAATGGTGGAATTCAACCACCATTCCATTTTGACCCCAAAATTCCATTAAACTCTCTACATTCACCTCATTCAGATTACTTTCTAAACACCCATTGGGATAATAATTCTACAGATAATCAATACACTCATTTTGATTCAGCTTTGAGTTCGATAGTTTCATCTCCAGTACCCTCCAACTCTGTAAATTCCAATTCATCACTCTGTGAATTGATTGGGAAATTGGGTTCAATTTGTACTTCTCCTTCAACCCCATTTACTAGTAACTGTGATTCGACGAGAACTTCGTGTTATACTACACCCATGAGCTCTCCTCCGAAATTACATATACCCATAATGAACCAAATTGGAAAAGATAAAGTACCCAATTTGGGGAATTCAGTTGTTATGAATTCTCCTCCATTTCCCTCTCTTTCAGCTGCTAAGTTCTCTTGTTTTGGTAGCCGAAGTTTTAATGGCAGAACGAGTCAGTTTGAGCTGAATAATGAAGATTCGCGGTATGGATCTGGTACTGGGGTTATGGGGATAGGAAATTTAACTAGAATATCGAGTAGCCCTTGTGTTGTGCAAAACAAAAACTCAAGCCTAATGATGTGTGAGAGATTGAATTTGGGCAAAATTTCAGGTCGTAATGAAGAGTGTTCTGTTTCTGAGCAAGACCCAAATGGTGAAATGGGGTCAAAAACAAGAAATGTATTGAATTCTAAGAAAAGAAAAGCAGTGAAATCAAAGGATTTTGTGCCAATTGTAGATGAAACTGGAAAAAAGAGAGCAAAATCAACACAAGGTAATGGGAGCAACAATGGAACTGTTAAAATGGAGGAACAAAAGGGCAATGAAGATGATGGAGCTGAGAAAGAAACAAAGGAAAATCGAAAGATTGCAGAGCCACCAAAGGATTACATTCATGTTAGAGCAAGAAGGGGTCAAGCTACTGATAGCCATAGTTTAGCTGAAAGAGTCCGCAGAGAAAAGATCAGTCAAAGAATGAAGCTTTTGCAAGATCTTGTACCAGGCTGTAACAAGGTGACTGGAAAAGCATTGATGCTCGACGAAATTATAAATTACGTCCGGTCACTCCAACACCAAGTTGAGTTCTTGTCTATGAAGTTGGCTTCAGTGAACCCAAGAACGGATATTCACATCGATAGTCTCCTTCACACAGAAATAAGTCAACCAAGTGGTTCTTTGCACCAACATGTTTTCCCAGTAGATGGATATGCTGAAAATCTTGCTCAGCTTCCCACAATCTGTGAGGATGATCTCCAAAGCATTGTCCAGATGGGATTTAATCAGAACTCTAACCAAGATCTGATATTGCAGTCACAGACATTCCCTGTGCCTAATTCTGAATCTCAAATGAAAATTAAGATGTAATCACCATTGATTTGTCCACAAATTAAGGTCCCCCACTGGAGAAAGAGACTGCTGTATATAAGCAGAGAGATTTTTAGTTTAATCTGCTTCAGAAATTGCTAATCAACATGATTAGGATTAGCATAAAGGGAATTATTTCCCCACTTATTGTAATCTATAATTGATTTGAGAGTTCTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g083170.2.1SL2.50ch06:48705034..48707579465+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g083170.2SL2.50ch06:48705035..487077562,722+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g083170.2.1.1SL2.50ch06:48705035..48706012978+n/a
exonexon:Solyc06g083170.2.1.2SL2.50ch06:48706425..4870649066+n/a
exonexon:Solyc06g083170.2.1.3SL2.50ch06:48706611..4870667969+n/a
exonexon:Solyc06g083170.2.1.4SL2.50ch06:48706803..4870687472+n/a
exonexon:Solyc06g083170.2.1.5SL2.50ch06:48706958..4870702972+n/a
exonexon:Solyc06g083170.2.1.6SL2.50ch06:48707182..48707281100+n/a
exonexon:Solyc06g083170.2.1.7SL2.50ch06:48707542..48707756215+2
intronintron:Solyc06g083170.2.1.1SL2.50ch06:48706013..48706424n/a+n/a
intronintron:Solyc06g083170.2.1.2SL2.50ch06:48706491..48706610n/a+n/a
intronintron:Solyc06g083170.2.1.3SL2.50ch06:48706680..48706802n/a+n/a
intronintron:Solyc06g083170.2.1.4SL2.50ch06:48706875..48706957n/a+n/a
intronintron:Solyc06g083170.2.1.5SL2.50ch06:48707030..48707181n/a+n/a
intronintron:Solyc06g083170.2.1.6SL2.50ch06:48707282..48707541n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17863953%2Fdetails feature 17863953
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