Solanum lycopersicum mRNA Solyc07g007120.2.1

mRNA details  
Name
Solyc07g007120.2.1
Type
mRNA
Length
1,834
Organism
Solanum lycopersicum
Description
Homeobox protein knotted-1-like 3 (AHRD V1 *-*- B6T3D1_MAIZE); contains Interpro domain(s) IPR005541 KNOX2
Location(s)
SL2.50ch07:1876090..1882613
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0045449
Length
6524
Nb exon
6
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g007120.2.1 Homeobox protein knotted-1-like 3 (AHRD V1 *-*- B6T3D1_MAIZE); contains Interpro domain(s) IPR005541 KNOX2

TTATAGTAAACGCTGTTGTTTTTTTCCTCTATTCTCTTTCTCTCTTTACTTTTTCTTCTTTGTGTACCAAAAAGAAAATAAAAATAAAAATGAACAGAGAGCATTGAACAAACACTCTATCAAAAAGCCATAGCTATGGAGTTTCAGGACCACTTTTCTCAAGAAATGGTTCTTCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAAAACGCGGTATTGCGTTCCATGCTACCTGAATCTCCTCATCACGACGCTCGAAAATCACCTCCGACTTGGCTCAATACTTCTCTCCTTCGTCAACAACACAGTCAGTTTGGTAACGCATCCTCACCTTCCTCGGCTGCAGCTGCAGCTGCCGTAGCCGGAGGGAATAATTTCCTTCATCTCCAGACATCTAACTCCGACTCGTCAAACTCTAACCAGTGGCTCTCACCTACTGCGGCGGCTGGAGGTGGAGGTAACGGCGGTGGAGGTGGGCATAATGATGAGTTATCAGAGTCGATGAATTTTGCGAAGAAGATGAGTCAACAGCATAGTGGAGGAGGAGAAGAAAACAATAATAATAATAATAATAATAATAATAATAATAATAATGAAGAGGAGAACTCATGGGAGAGAGAGAAATGTAAAGCGGATATATTGAATCATCCTTTATACGATCAGCTACTGTCGGCACACGTTTCATGCCTGAGAATTGCGACGCCGGTGGATCAATTACCGAGGATTGACGCTCAGCTAGCTCAATCGCAAAACGTGGTAGCCAAATACTCTGTACTTGGACAAGGTCAACCGCCTCTAGATGATAAAGACCTCGATCAATTTATGACACATTATGTTCTGTTGCTCTCTTCCTTTAAAGAACAACTGCAACAACATGTCCGCGTCCATGCAATGGAAGCTGTCATGGCTTGCTGGGAGCTAGAACAATCTCTACAAAGCTTAACAGGGGTAGCACCAGGTGAAGGTACAGGAGCAACCATGTCTGATGATGATGATGACCAGGCTGATAGTGACACAAACTTTTTGGATGGAGGTTTTGATGGACCAGATAGCATGGGATTTGGTCCTCTTGTACCTACTGAAAGTGAAAGGTCCCTGATGGAGCGTGTTAGGCAAGAACTCAAGCATGAACTCAAACAGGGTTATAAGGAAAAAATTGTTGACATTAGAGAGGAAATTTTACGCAAAAGAAGAGCAGGAAAACTGCCTGGTGATACTACATCTGTGTTGAAAGCTTGGTGGCAATCACATTCTAAGTGGCCTTATCCAACTGAGGAAGACAAAGCACGATTAGTGCAAGAAACAGGTTTACAACTGAAGCAGATAAACAATTGGTTTATTAACCAAAGGAAAAGGAACTGGCACAGCAATCCATCAACGTCTTCTTCTCAGAAAAGCAAACGCAAGAGTGCAGGTGAAATCAAGCAGTAAAAAAAAGACATGATGAAGAAGAAAATGAAATTTTTGTGTTCTAGCAAAGCATAAAGATTCATCACAAAACAAAAAACATGAATGGCTAGAATTTGGGAAATTGAATTAATGAGTTTTTGGCTGTGTGAAGTAATTGACCACAGAAAGTTCCCAAGCTGACCTGGTTGACTAAGATATGCTTTAGAAAAAAAGAGAGTATAGATACTTGTGAAAGTAATACTAGCACTTTCTTATTTTTATGAGGTTAATTTTCTATGTTTTAAGCCAAATATTTTAGGACAACAGGTTTCAGTTTTTATAATTTTTGTTTTGTATCAAGTATTTTGGTGGCTATGTTGTAATTTTGAATTCTAGTGTTACTCATTTTTGTGAATAGAAGTTGTAGATTATAATTACTTAGTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g007120.2.1SL2.50ch07:1876224..1882210432+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g007120.2SL2.50ch07:1876090..18826136,524+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g007120.2.1.1SL2.50ch07:1876090..1876914825+n/a
exonexon:Solyc07g007120.2.1.2SL2.50ch07:1879269..1879389121+n/a
exonexon:Solyc07g007120.2.1.3SL2.50ch07:1880283..1880476194+n/a
exonexon:Solyc07g007120.2.1.4SL2.50ch07:1881098..1881229132+2
exonexon:Solyc07g007120.2.1.5SL2.50ch07:1881329..1881465137+n/a
exonexon:Solyc07g007120.2.1.6SL2.50ch07:1882189..1882613425+n/a
intronintron:Solyc07g007120.2.1.1SL2.50ch07:1876915..1879268n/a+n/a
intronintron:Solyc07g007120.2.1.2SL2.50ch07:1879390..1880282n/a+n/a
intronintron:Solyc07g007120.2.1.3SL2.50ch07:1880477..1881097n/a+n/a
intronintron:Solyc07g007120.2.1.4SL2.50ch07:1881230..1881328n/a+n/a
intronintron:Solyc07g007120.2.1.5SL2.50ch07:1881466..1882188n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17868364%2Fdetails feature 17868364
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)