Solanum lycopersicum mRNA Solyc07g008950.2.1
 mRNA details
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| Name | Type |
Length
2,668
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Organism |
|
Description
Methionyl-tRNA synthetase (AHRD V1 ***- B2W192_PYRTR); contains Interpro domain(s) IPR015413 Aminoacyl-tRNA synthetase, class I (M)
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Location(s)
SL2.50ch07:3973124..3982881
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005737
- GO:0000049
- Length
- 9758
- Nb exon
- 17
- Sifter term
- GO:0005515
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g008950.2.1 Methionyl-tRNA synthetase (AHRD V1 ***- B2W192_PYRTR); contains Interpro domain(s) IPR015413 Aminoacyl-tRNA synthetase, class I (M)
AAAATGATAAAAACACACTAAATATTGAGACAAAAATACTGTCATCTAAAACCCTAGCCGGAAACTTATCTGAGATGGGCGATTCTTCGACCGCCGGCAACGGAGACAATCTCTCGCCGGCCTCTCCCAAACTTCCGATTCCCGGCAAAAGAAACATCCTCATCACAAGCGCTTTGCCGTATGTCAACAACGTTCCTCATCTCGGAAACATCATCGGAAGTGTGTTGAGTGCGGATGTCTTCGCGAGATACTGTAGACTTCGGGATTACAATATCATATACATGTGTGGTACTGATGAATATGGCACAGCTACAGAGACTAAAGCCTTGGAAGAAAATTGTACTCCCAAGCAAATTTGTGACAAATATCATGCAATCCATAGAGAAGTGTATAAATGGTTTAATATAAGCTTTGATCACTTTGGACGCACATCAACTCCGCAACAGACCGAAGTTTGTCAGGCGATCTTCAAAAAACTCTGGGAGAATAATTGGCTCTCTGAGAACACCATGCAACAGCCGTACTGTGAGACATGCAAAAAGTTTTTGGCTGACCGGCTTGTAGAGGGTAACTGTCCGACACCAGGTTGCAACTATGATTCTGCACGAGGAGATCAATGTGAGAAGTGTGGGAAGCTCTTAAATCCCACCGAATTGAAGGATCCAAGATGCAAGGTTTGCCGTAACACTCCATGCATCCGAGATACAGATCATTTGTTTCTTGAGCTCCCTTTGCTGAAGGATGAATTAGAAGCATACGTCAACGACCTGTCAGTGGCTGGAGGATGGAGTCAGAATGCTATCCACACTACACATGCTTGGCTTAGAGAAGGACTGAAGCCAAGGTGTATAACTAGAGATTTGAAATGGGGGGTTCCAGTTCCACATGAAAAATATAAGGACAAGGTTTTTTACGTGTGGTTTGATGCTCCTATTGGATATGTATCTATAACCTCATGCTACACAACTGAGTGGGAGAAGTGGTGGAAGAATCCAGAGAATGTGGAGCTCTATCAGTTTATGGGCAAAGATAATGTGCCTTTTCACACTGTGATTTTCCCATCTACGCTTCTTGGAACTCGTGAAAACTGGACTCTTATGAAGACAATTAGTGTAACAGAATACTTGAACTATGAAGCAGGCAAATTCTCAAAGAGCAAGGGCGTAGGAGTATTTGGTAATGATGCAAAAGAGACAAACATTCCTGTAGAAGTTTGGAGATATTACTTGCTAACAAACAGGCCGGAGGTGTCAGACACTTTGTTTAGTTGGGTGGATTTACAAGCAAAGCTGAACAGCGAGTTGCTAAACAACTTAGGCAATTTCGTCAATAGAGTCCTGAGTTTCATTGCAAAAGATCCGGCTTCAGGTTATGGTTCCATAATTCCCAATCCAGAAGGAGCTGAATCACACCCTTTAACTAAGGCCTTAGGTGAAAAAGTTGGAAATTATGTGGAAGAATACATAGAAGCCATGGAGAAGGTTAAATTAAAGCAGGGCTTGAAGATTGCTATGTCTATTTCTGGAGAAGGAAACGGTTATTTGCAAGAGAGCCAATTCTGGAGACTTTACAAGGAAGATAGGCCTTCTTGTTCCATTGTGATGAGCACTGCTTCCGGCCTAGTATATCTTCTTGCATGTCTTTTAGAGCCATTTATGCCATCCTTTTCACGGGAAGTGCTTAAGCAGCTTAACTTTCCTCCTGAAACAAAACCTTCACTGTCTGATGACAGAGGTGACATAGAAAAGAGCAAAAGACCATGGAATATCCTACCTGCAGGTCACAAAATTGGAATACCAACACCATTGTTCAAAGAACTGAAAGATGAAGAAGTTGAATTCTACAGAGAAAAGTTTGCTGGAAGTCAGGCAGATAGGAATTTGAAGGCTGAAACTGAGGCAAGGAAGATCACTGATCAGTTGCACAAAGCAAAAATATCAGATGCTAATAAGAAGAAAGAACGTGCTACAAAATCTTCTGAAGCCAAAGCTAAGGGTTCAGCCTCTGTTGAAGCAGAAATTTCGATTAGCAGACTTGATATTCGTGTTGGTCTCATTACAAGAGCACAGAAGCATCCCGATGCTGATTCTTTGTATGTTGAAGAGATTGATGTTGGTGAAGCTCAGCCCAGAACTGTCGTTAGTGGCCTCGTAAAATATATTCCTCTGGAGGAAATGCAGAATCGAAAGGTCTGTGTTCTATGCAACCTAAAACCAGCCAGCATGAGGGGCATAAAATCCCAGGCAATGGTTCTTGCTGCTTCTAATAGTGATCACACTAAGGTTGAACTAGTTGAGCCACCTAAAGATGCTGCAATTGGTGAACGAGTTATGTTCCCTGGGTTAGATGGCAAGGCGGATGATGTCTTGAATCCTAAGAAGAAGGTTTGGGAAACTCTTCAGGTGGATCTGCACACAAATAAGGAGTTGGTTGCTTGCTATAAAGATTTGCCACTCACCACTTCTGTTGGTGTTTGCAAGGTCACATCCATTTCTGAAGGATCGATTAGGTAAATTTTTTCTTTGGCGGATGAACTAGAGAGGGGATTTAAGGATTTTGTTTTAATTCTTTTCACATTTTTCATTTCTACACAATGTTATACAATCAAACTTTCCACTATGATTGAGTGGAGTTGGAAGGGAAATGAGTATTTGAAGTGTTCTTGTCT
AAAATGATAAAAACACACTAAATATTGAGACAAAAATACTGTCATCTAAAACCCTAGCCGGAAACTTATCTGAGATGGGCGATTCTTCGACCGCCGGCAACGGAGACAATCTCTCGCCGGCCTCTCCCAAACTTCCGATTCCCGGCAAAAGAAACATCCTCATCACAAGCGCTTTGCCGTATGTCAACAACGTTCCTCATCTCGGAAACATCATCGGAAGTGTGTTGAGTGCGGATGTCTTCGCGAGATACTGTAGACTTCGGGATTACAATATCATATACATGTGTGGTACTGATGAATATGGCACAGCTACAGAGACTAAAGCCTTGGAAGAAAATTGTACTCCCAAGCAAATTTGTGACAAATATCATGCAATCCATAGAGAAGTGTATAAATGGTTTAATATAAGCTTTGATCACTTTGGACGCACATCAACTCCGCAACAGACCGAAGTTTGTCAGGCGATCTTCAAAAAACTCTGGGAGAATAATTGGCTCTCTGAGAACACCATGCAACAGCCGTACTGTGAGACATGCAAAAAGTTTTTGGCTGACCGGCTTGTAGAGGGTAACTGTCCGACACCAGGTTGCAACTATGATTCTGCACGAGGAGATCAATGTGAGAAGTGTGGGAAGCTCTTAAATCCCACCGAATTGAAGGATCCAAGATGCAAGGTTTGCCGTAACACTCCATGCATCCGAGATACAGATCATTTGTTTCTTGAGCTCCCTTTGCTGAAGGATGAATTAGAAGCATACGTCAACGACCTGTCAGTGGCTGGAGGATGGAGTCAGAATGCTATCCACACTACACATGCTTGGCTTAGAGAAGGACTGAAGCCAAGGTGTATAACTAGAGATTTGAAATGGGGGGTTCCAGTTCCACATGAAAAATATAAGGACAAGGTTTTTTACGTGTGGTTTGATGCTCCTATTGGATATGTATCTATAACCTCATGCTACACAACTGAGTGGGAGAAGTGGTGGAAGAATCCAGAGAATGTGGAGCTCTATCAGTTTATGGGCAAAGATAATGTGCCTTTTCACACTGTGATTTTCCCATCTACGCTTCTTGGAACTCGTGAAAACTGGACTCTTATGAAGACAATTAGTGTAACAGAATACTTGAACTATGAAGCAGGCAAATTCTCAAAGAGCAAGGGCGTAGGAGTATTTGGTAATGATGCAAAAGAGACAAACATTCCTGTAGAAGTTTGGAGATATTACTTGCTAACAAACAGGCCGGAGGTGTCAGACACTTTGTTTAGTTGGGTGGATTTACAAGCAAAGCTGAACAGCGAGTTGCTAAACAACTTAGGCAATTTCGTCAATAGAGTCCTGAGTTTCATTGCAAAAGATCCGGCTTCAGGTTATGGTTCCATAATTCCCAATCCAGAAGGAGCTGAATCACACCCTTTAACTAAGGCCTTAGGTGAAAAAGTTGGAAATTATGTGGAAGAATACATAGAAGCCATGGAGAAGGTTAAATTAAAGCAGGGCTTGAAGATTGCTATGTCTATTTCTGGAGAAGGAAACGGTTATTTGCAAGAGAGCCAATTCTGGAGACTTTACAAGGAAGATAGGCCTTCTTGTTCCATTGTGATGAGCACTGCTTCCGGCCTAGTATATCTTCTTGCATGTCTTTTAGAGCCATTTATGCCATCCTTTTCACGGGAAGTGCTTAAGCAGCTTAACTTTCCTCCTGAAACAAAACCTTCACTGTCTGATGACAGAGGTGACATAGAAAAGAGCAAAAGACCATGGAATATCCTACCTGCAGGTCACAAAATTGGAATACCAACACCATTGTTCAAAGAACTGAAAGATGAAGAAGTTGAATTCTACAGAGAAAAGTTTGCTGGAAGTCAGGCAGATAGGAATTTGAAGGCTGAAACTGAGGCAAGGAAGATCACTGATCAGTTGCACAAAGCAAAAATATCAGATGCTAATAAGAAGAAAGAACGTGCTACAAAATCTTCTGAAGCCAAAGCTAAGGGTTCAGCCTCTGTTGAAGCAGAAATTTCGATTAGCAGACTTGATATTCGTGTTGGTCTCATTACAAGAGCACAGAAGCATCCCGATGCTGATTCTTTGTATGTTGAAGAGATTGATGTTGGTGAAGCTCAGCCCAGAACTGTCGTTAGTGGCCTCGTAAAATATATTCCTCTGGAGGAAATGCAGAATCGAAAGGTCTGTGTTCTATGCAACCTAAAACCAGCCAGCATGAGGGGCATAAAATCCCAGGCAATGGTTCTTGCTGCTTCTAATAGTGATCACACTAAGGTTGAACTAGTTGAGCCACCTAAAGATGCTGCAATTGGTGAACGAGTTATGTTCCCTGGGTTAGATGGCAAGGCGGATGATGTCTTGAATCCTAAGAAGAAGGTTTGGGAAACTCTTCAGGTGGATCTGCACACAAATAAGGAGTTGGTTGCTTGCTATAAAGATTTGCCACTCACCACTTCTGTTGGTGTTTGCAAGGTCACATCCATTTCTGAAGGATCGATTAGGTAAATTTTTTCTTTGGCGGATGAACTAGAGAGGGGATTTAAGGATTTTGTTTTAATTCTTTTCACATTTTTCATTTCTACACAATGTTATACAATCAAACTTTCCACTATGATTGAGTGGAGTTGGAAGGGAAATGAGTATTTGAAGTGTTCTTGTCT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g008950.2.1 | SL2.50ch07:3973278..3982807 | 813 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g008950.2 | SL2.50ch07:3973124..3982881 | 9,758 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g008950.2.1.1 | SL2.50ch07:3982663..3982881 | 219 | - | 2 |
| exon | exon:Solyc07g008950.2.1.10 | SL2.50ch07:3976796..3976914 | 119 | - | n/a |
| exon | exon:Solyc07g008950.2.1.11 | SL2.50ch07:3976253..3976318 | 66 | - | n/a |
| exon | exon:Solyc07g008950.2.1.12 | SL2.50ch07:3975953..3976081 | 129 | - | n/a |
| exon | exon:Solyc07g008950.2.1.13 | SL2.50ch07:3975667..3975810 | 144 | - | n/a |
| exon | exon:Solyc07g008950.2.1.14 | SL2.50ch07:3975458..3975578 | 121 | - | 2 |
| exon | exon:Solyc07g008950.2.1.15 | SL2.50ch07:3974343..3974581 | 239 | - | n/a |
| exon | exon:Solyc07g008950.2.1.16 | SL2.50ch07:3974162..3974263 | 102 | - | n/a |
| exon | exon:Solyc07g008950.2.1.17 | SL2.50ch07:3973124..3973509 | 386 | - | n/a |
| exon | exon:Solyc07g008950.2.1.2 | SL2.50ch07:3982425..3982569 | 145 | - | 1 |
| exon | exon:Solyc07g008950.2.1.3 | SL2.50ch07:3981498..3981651 | 154 | - | n/a |
| exon | exon:Solyc07g008950.2.1.4 | SL2.50ch07:3981175..3981330 | 156 | - | n/a |
| exon | exon:Solyc07g008950.2.1.5 | SL2.50ch07:3980648..3980878 | 231 | - | n/a |
| exon | exon:Solyc07g008950.2.1.6 | SL2.50ch07:3980304..3980447 | 144 | - | n/a |
| exon | exon:Solyc07g008950.2.1.7 | SL2.50ch07:3978048..3978138 | 91 | - | 2 |
| exon | exon:Solyc07g008950.2.1.8 | SL2.50ch07:3977800..3977906 | 107 | - | n/a |
| exon | exon:Solyc07g008950.2.1.9 | SL2.50ch07:3977585..3977699 | 115 | - | 2 |
| intron | intron:Solyc07g008950.2.1.10 | SL2.50ch07:3976915..3977584 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.11 | SL2.50ch07:3976319..3976795 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.12 | SL2.50ch07:3976082..3976252 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.13 | SL2.50ch07:3975811..3975952 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.14 | SL2.50ch07:3975579..3975666 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.15 | SL2.50ch07:3974582..3975457 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.16 | SL2.50ch07:3974264..3974342 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.17 | SL2.50ch07:3973510..3974161 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.2 | SL2.50ch07:3982570..3982662 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.3 | SL2.50ch07:3981652..3982424 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.4 | SL2.50ch07:3981331..3981497 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.5 | SL2.50ch07:3980879..3981174 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.6 | SL2.50ch07:3980448..3980647 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.7 | SL2.50ch07:3978139..3980303 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.8 | SL2.50ch07:3977907..3978047 | n/a | - | n/a |
| intron | intron:Solyc07g008950.2.1.9 | SL2.50ch07:3977700..3977799 | n/a | - | n/a |
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