Solanum lycopersicum mRNA Solyc07g017780.2.1

mRNA details  
Name
Solyc07g017780.2.1
Type
mRNA
Length
3,358
Organism
Solanum lycopersicum
Description
H-ATPase (AHRD V1 **** Q8L6I3_ORYSJ); contains Interpro domain(s) IPR006534 ATPase, P-type, plasma-membrane proton-efflux
Location(s)
SL2.50ch07:8095828..8102636
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016020
  • GO:0008152
  • GO:0016021
Length
6809
Nb exon
12
Sifter term
GO:0008553
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g017780.2.1 H-ATPase (AHRD V1 **** Q8L6I3_ORYSJ); contains Interpro domain(s) IPR006534 ATPase, P-type, plasma-membrane proton-efflux

ATACCTCACAATTTCTCTCTTCACAAAGAGGCCTTAAAAACCTCTCTTCATTCCCTTCCGCCGTTCTCAATTTTGCGATCGATGAGTCTCATTAGTCGTTATACTCACTGAAATCAATCCGTTTTCTGCTTAATTTTGTATTGACTTGTTTGCTGCTGGTTTACCGACATGGCGAAAGCTATAAGCCTCGAAGAGATCAAAAATGAGACTGTTGATCTGACCTCTCTGGTTAACATTCAAAACGAAGTTACAGATGAAGAGAAAATCCCCATTGAAGAAGTGTTTGAACAACTGAAATGTTCGCGAGAGGGTCTGACTTCGGACGAAGGAGCCAACAGGCTTCAAATCTTTGGACCGAACAAATTGGAAGAGAAAAAAGAAAGCAAAATACTGAAGTTTCTTGGGTTTATGTGGAATCCTCTGTCATGGGTTATGGAGATGGCGGCTATCATGGCCATTGCACTGGCTAATGGAGATGGGAAGCCCCCAGATTGGCAAGATTTTGTTGGTATTGTTTGCTTGCTGGTGATCAATTCAACTATCAGTTTTATTGAAGAAAACAATGCTGGCAATGCTGCCGCAGCTCTTATGGCTGGTCTTGCTCCCAAAACCAAGGTTCTTAGAGATGGGCGCTGGAGTGAACAGGAAGCTGCTATTCTAGTGCCTGGTGATATTATAAGTGTCAAGTTGGGAGACATTGTTCCTGCTGATGCTCGTCTTCTTGAAGGTGATCCTTTAAAGATTGATCAATCTGCCCTTACAGGAGAATCTCTTCCTGTGACAAAGAATCCTGGAGATGAAGTTTTCTCTGGATCAACCTGCAAACAAGGTGAGCTTGAAGCTGTAGTCATTGCCACTGGAGTTCACACTTTCTTTGGCAAGGCAGCACACCTTGTTGACAGTACAAACAATGTTGGTCATTTCCAGAAAGTGTTAACAGCCATAGGAAACTTCTGTATCTGTTCCATTGCTATTGGTATGCTGGTTGAGATTATTGTCATGTATCCAATCCAGCACAGGAAGTACAGGGATGGAATTGACAATCTCTTGGTGCTCCTTATTGGTGGTATTCCCATTGCTATGCCTACTGTGTTGTCAGTCACTATGGCTATTGGATCCCATAGGCTCTCCCAGCAGGGTGCCATCACCAAGAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTGTTGTGCAGTGACAAGACAGGTACCTTGACTCTTAACAAGTTGAGTGTCGACAGAAGCTTGGTTGAAGTGTTTACTAAGGGAGTAGATAAAGAATATGTGCTCCTCCTTGCCGCAAGGGCCTCTAGAGTTGAAAATCAGGATGCAATTGATGCTTGCATGGTTGGCATGCTTGCCGATCCAAAAGAGGCACGAGCTGGTATCAGGGAGGTGCATTTCTTGCCCTTCAATCCAGTGGACAAGAGAACTGCTTTAACATATATTGACAGCAATGGCAACTGGCACCGTGCCAGCAAGGGAGCTCCTGAGCAGATTTTGGACCTATGTAACTGTAAGGAAGATGTCAGGAGAAAGGTTCATTCAATGATCGACAAATACGCTGAGCGTGGGTTGAGGTCACTGGCTGTAGCTAGACAGGAAGTGCCAGAGAAATCAAAAGAGAGCACTGGAGGTCCATGGCAATTTGTTGGATTGCTACCCCTCTTTGATCCTCCCAGGCATGATAGTGCTGAGACCATCCGTAGAGCTCTCAACCTTGGTGTAAATGTTAAGATGATCACTGGGGATCAATTGGCTATTGCCAAGGAGACTGGCCGTAGGCTTGGAATGGGAACAAACATGTACCCATCAGCATCTTTACTTGGTCAAGACAAGGATTCATCTATTGCTTCACTTCCTGTAGAAGAGTTGATTGAGAAGGCAGATGGATTTGCTGGAGTATTTCCTGAGCACAAATATGAGATTGTGAAGAAGTTGCAGGAGAGAAAGCACATTGTGGGAATGACTGGTGATGGTGTGAACGATGCTCCTGCTTTGAAGAAGGCAGATATCGGTATCGCTGTTGCAGATGCTACTGATGCAGCACGAGGTGCTTCTGATATCGTGCTCACTGAGCCAGGTCTAAGCGTTATCATCAGTGCTGTGTTGACCAGTAGAGCTATTTTCCAGAGGATGAAGAATTACACAATATATGCAGTTTCCATCACAATCCGTATTGTGTTTGGTTTCATGCTTATTGCTCTAATCTGGAAGTACGACTTCTCTGCATTTATGGTTTTGATCATTGCCATCCTAAATGACGGAACCATTATGACAATCTCAAAGGATAGAGTGAAACCATCTCCAATGCCTGATAGCTGGAAGTTGAATGAAATCTTTGCAACTGGTGTTGTTCTTGGAGGGTACCAAGCATTGATGACTGTTATTTTCTTCTGGGCGATGCATGACACTAGTTTCTTCACGGACAAATTTGGTGTGAAGGATATTAGGGAAAGTGATGAAGAAATGATGTCTGCTTTGTACCTTCAAGTGAGTATTATCAGCCAGGCTTTGATTTTCGTGACCCGTTCACGAAGCTGGTCCTTCGTTGAACGTCCAGGAGCTCTGTTAATGATTGCTTTCTTGATTGCCCAATTGGTTGCCACTTTAATTGCTGTCTATGCCGACTGGACTTTTGCAAGAGTCAAAGGATGTGGATGGGGATGGGCTGGTGTCATCTGGATTTTCAGCATTGTTACCTACTTCCCACTTGACATAATGAAATTCGCCATCCGTTACATCTTAAGTGGAAAGGCTTGGAATAACTTGCTTGACAACAAGACTGCTTTCACCACAAAGAAAGACTATGGAAAAGAAGAAAGGGAAGCTCAATGGGCACTTGCTCAGAGAACTTTACATGGACTTCAACCACCAGAAGCATCAAACCTGTTCAACGAAAAGAACAGCTACCGGGAACTGTCTGAAATTGCTGAACAAGCAAAGAGAAGAGCAGAGATGGCAAGGCTTCGTGAGTTGCACACACTCAAGGGTCATGTTGAATCAGTGGTGAAGCTGAAAGGTCTGGATATCGAAACGATCCAGCAGCATTATACAGTTTAAGAAAGATAATCATGATACACACAAGAAAAGGGAATGGCAGGCTCTGATATATCTCATGTTAATTATTAATTAGAGAAGAAGAGAGAGACAAGCTTTTGGCCTTAACCACATAAACAAAAAAACATTGTCTTTTAATATAAAGGGGGAAAACATTGTCTTGTGTTGTCTTTCCCCCCTCTCATCTATTTTCTTTAACTTCGTTATGTTATATTTTGAAGCACCACCCATTGAAAGGGATTGTGTCCATGTTTTTTCCAAAATTTTAATGGTGAAGTGACATTTCCTTGTAACA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g017780.2.1SL2.50ch07:8095995..8102344966+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g017780.2SL2.50ch07:8095828..81026366,809+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g017780.2.1.1SL2.50ch07:8095828..8096046219+n/a
exonexon:Solyc07g017780.2.1.10SL2.50ch07:8101543..8101716174+2
exonexon:Solyc07g017780.2.1.11SL2.50ch07:8101803..8101985183+n/a
exonexon:Solyc07g017780.2.1.12SL2.50ch07:8102066..8102636571+n/a
exonexon:Solyc07g017780.2.1.2SL2.50ch07:8098548..809858639+n/a
exonexon:Solyc07g017780.2.1.3SL2.50ch07:8098757..80999981,242+n/a
exonexon:Solyc07g017780.2.1.4SL2.50ch07:8100085..8100189105+n/a
exonexon:Solyc07g017780.2.1.5SL2.50ch07:8100274..8100583310+n/a
exonexon:Solyc07g017780.2.1.6SL2.50ch07:8100670..8100908239+n/a
exonexon:Solyc07g017780.2.1.7SL2.50ch07:8101002..810103433+2
exonexon:Solyc07g017780.2.1.8SL2.50ch07:8101131..810121282+n/a
exonexon:Solyc07g017780.2.1.9SL2.50ch07:8101296..8101456161+n/a
intronintron:Solyc07g017780.2.1.1SL2.50ch07:8096047..8098547n/a+n/a
intronintron:Solyc07g017780.2.1.10SL2.50ch07:8101717..8101802n/a+n/a
intronintron:Solyc07g017780.2.1.11SL2.50ch07:8101986..8102065n/a+n/a
intronintron:Solyc07g017780.2.1.2SL2.50ch07:8098587..8098756n/a+n/a
intronintron:Solyc07g017780.2.1.3SL2.50ch07:8099999..8100084n/a+n/a
intronintron:Solyc07g017780.2.1.4SL2.50ch07:8100190..8100273n/a+n/a
intronintron:Solyc07g017780.2.1.5SL2.50ch07:8100584..8100669n/a+n/a
intronintron:Solyc07g017780.2.1.6SL2.50ch07:8100909..8101001n/a+n/a
intronintron:Solyc07g017780.2.1.7SL2.50ch07:8101035..8101130n/a+n/a
intronintron:Solyc07g017780.2.1.8SL2.50ch07:8101213..8101295n/a+n/a
intronintron:Solyc07g017780.2.1.9SL2.50ch07:8101457..8101542n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17872252%2Fdetails feature 17872252
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