Solanum lycopersicum mRNA Solyc07g018010.2.1

mRNA details  
Name
Solyc07g018010.2.1
Type
mRNA
Length
1,059
Organism
Solanum lycopersicum
Description
Transcription Factor (AHRD V1 **** Q84LF9_ORYSA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch07:8851235..8854777
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3543
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g018010.2.1 Transcription Factor (AHRD V1 **** Q84LF9_ORYSA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

AACTATGTTCATTTTTTAAAGCTCTACACCCACTTTAACCACAAAAAAGGTATTTAAAGCATAACTTGTCTTGTTCTGCTTCATCTTCACTCCATCTCAATGGACAACATTGGTGATGAATATAAAAATTATTGGGAAACAACTATGTTTTTACAATCAGAAGAGCTCGATAGCTATTTCGATGAGCCAATTTCATCGTATTATGATTCAAGTTCACCGGATGGGTCACAATCATCGATGGCATCGAAGAACATTGTATCAGAGAGGAATAGGAGGAAGAAATTGAATGAAAGGTTATTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCTTCAATAATCAAAGATGCAATTGATTATATTGAAGAATTACATAATCAAGAGAGAAGAATTCGAGGAGAAATTTCAGAGCTTGAATCTGGAAGATCATCGTCAAAGAAGAATAGTAACGATGTTGAATTTGAACAAGATGAAAGTTTCGATTCAAAGCCTAAAAGATCGAGAAGATTTGAGATGCAATATGGATATGATTCTTCAGGATCAACTACTAGATCACCACCATCTTCTTCCCCTGTTGATGTTCTTGAGTTGAGGGTATCTTCAATGGGAGAAAAGACAGTTGTGGTGAGTCTTACTTGCAGCAAAAGAACAGACACAATGGTTAAAGTTTGTGAAGTGTTTGAATCTTTGAATATCAAAATAATTAGTGCAAATATCACTGCTTTCTCTGGGAGGCTTCTCAAGACAGCTTTCATTGAGGCTGATGAAGAAGAGAGGGATCTTTTGAAGTTGAGGATTGAAACAGCTATAGCTTCTCTAAACGATCCCGATAGCCCGATGAGTTCTTAGAACAACGATATCTTGGATTTTAACTATGTTTCGCCTTCATGTAATGAGCATGTAGTTATTTGAAGAGTGTTTTTTTCCGCGTTATTTCTACCTCATTCTTCTTCTTAAAATTTGGTCATCTTTGACTGGTTATTTATGTAGTTTGTAGTTGGTGTTTTTCACAAGAAATCTAAGTCAATGAAAGTCTACTTTCAGAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g018010.2.1SL2.50ch07:8851535..8854678254-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g018010.2SL2.50ch07:8851235..88547773,543-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g018010.2.1.1SL2.50ch07:8854605..8854777173-1
exonexon:Solyc07g018010.2.1.2SL2.50ch07:8854356..8854515160-n/a
exonexon:Solyc07g018010.2.1.3SL2.50ch07:8853989..8854255267-n/a
exonexon:Solyc07g018010.2.1.4SL2.50ch07:8853756..8853926171-n/a
exonexon:Solyc07g018010.2.1.5SL2.50ch07:8851343..8851625283-n/a
exonexon:Solyc07g018010.2.1.6SL2.50ch07:8851235..88512395-n/a
intronintron:Solyc07g018010.2.1.2SL2.50ch07:8854516..8854604n/a-n/a
intronintron:Solyc07g018010.2.1.3SL2.50ch07:8854256..8854355n/a-n/a
intronintron:Solyc07g018010.2.1.4SL2.50ch07:8853927..8853988n/a-n/a
intronintron:Solyc07g018010.2.1.5SL2.50ch07:8851626..8853755n/a-n/a
intronintron:Solyc07g018010.2.1.6SL2.50ch07:8851240..8851342n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17872485%2Fdetails feature 17872485
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