Solanum lycopersicum mRNA Solyc07g019670.2.1

mRNA details  
Name
Solyc07g019670.2.1
Type
mRNA
Length
2,461
Organism
Solanum lycopersicum
Description
Fatty acid oxidation complex subunit alpha (AHRD V1 ***- FADJ_ECOHS); contains Interpro domain(s) IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding
Location(s)
SL2.50ch07:12707106..12716182
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0050662
  • GO:0006631
  • GO:0008152
  • GO:0016491
Length
9077
Nb exon
18
Sifter term
GO:0004300
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g019670.2.1 Fatty acid oxidation complex subunit alpha (AHRD V1 ***- FADJ_ECOHS); contains Interpro domain(s) IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding

ATGGCTACTCTTAAGGTGACGATGGAGGTGGGAATCGACGGCGTTGCAGTGATCACCATTTTTAATCCTCCGGTCAATGCTTTAGCTATTCCAATTATCGCTGGATTGAAGGAGAAGTGGACTGAAGCGACGATGAGAAACGATGTTAAAGCTATTGTTTTGACTGGAAATGGGGGGAGATTTTCTGGTGGTTTTGATATCAATGTTTTTCAGAAGGTTCATGCGACTGGGGATACATCTCAGATGCCTGATGTTTCTGTTAATCTTGTGGTTAACATGATGGAAGATGGTAAAAAGCCTGCAGTTGCTGCTATAGAAGGACTTGCACTCGGAGGTGGCTTAGAATTGGCATTGGGATGCCATGCACGAATTGCTGCACCACGAGCACAACTGGGGTTGCCAGAGCTCAGTCTTGGAGTCATGCCTGGATTTGGAGGTACACAGCGTCTTCCAAGGCTTATAGGGTTGTCTAAAGCTGTTGAACTTATGATGACATCTAAGCCAATAATGTCGGAGGAAGGGAAGATGCTTGGTCTCATTGATGCCATTGTCCCTTCAGCAGAGTTATTAAAAGTATCTAGACGGTGGGCACTTGATATTGCAGAAAGGCGCAAGCCTTGGATGCGTTCCCTTCACAAGACAGACAAAATTGGTTCCCTTTCAGAAGCACATGAAATACTGAAGGTGGCTAGGGAACAAGTGAAACAGACAGTTAAGAATATGCCTCAGCACATGGCGTGCATTGAGGTAATTGAAGAAGGCATCATTCATGGAGGATATAATGGGGTTCTCAAGGAAGCTAAAGTATTCAAGGACCTTTTAATGTCAGATACATCAAAGGGTCTTGTTCATATATTTTTTTCCCAACGGGCAACTTCGAAGGTACCTAATGTCACTGATATTGGCCTCAAACCTAGGACAGTCAAGAAAGTTGCTGTAATAGGTGGAGGTTTAATGGGTTCAGGCATAGCTACAGCCCTTGCCCTTAGCAACACAATTGTTATACTTAAGGAAATTAATTCTGAGTTTCTTCAGAAGGGGATGAAAGCTATTGAAGCAAATGTCAGCGGACTGGTAGCTAGAAAGAATTTGCCACAGGATAAAGCAGATAAAGCCCTTTCAATGGTTAAAGGTGCACTGGATTATTCAGATTTTAAGGATGTGGATATGGTCATAGAGGCTGTCATTGAAAATGTTCCACTAAAACAGAAAATATTTAGCGAGATTGAGAAGGTATGTCCTCCACATTGTATTTTGGCAACAAACACATCTACTATTGACCTCAACATTATTGGAGAAAATACCACATCCAAGGATCGGATTATCGGGGCCCACTTTTTCAGTCCTGCTCACATTATGCCTTTGCTGGAGATAGTACGAACTGAGAAGACATCTGCCCAAGCAATTCTTGACCTTATGGCTGTTGGAAGGGCAATTAAAAAAGTACCTGTTGTGGTGGGAAATTGTACTGGTTTTGCTGTCAATAGAACCTTCTTTCCCTACTCCCAGGGTGCACATATTCTGGTCAATCTAGGAGTGAATGTATTCAGGATTGACACACAAATTGCCAGCTTTGGTCTCCCTATGGGTCCCTTCCAGCTTCAGGATTTAACAGGATATGGAGTGGCTGTTGCTGTAGGGAAGGAATTTCGTTCTGCTTTTTCTGATCGCACTTTTAAGTCTCCGTTGATCGACCTTCTAATAAAAAGTGGTAGAAATGGTAAAAACAACGGAAAAGGCTACTATATTTATGAGAAGGGAAGAAAACCAAGACCTGATTTTACTGTGCTTCCAATTATTGAGGAATCAAGAAGGCTCGCCAACATAATGCCTGGAGGAAAGCCAATATCTATCACTGACCAAGAAATTGTTGAGATGATACTCTTTCCAGTTGTGAATGAGGCATGTCGTGTTTTGGATGAAGGGATAGTAGTCCGAGCCTCTGACCTTGATGTCACATCTGTCCTTGGAATGAGTTTTCCATCTTACCGAGGTGGTATTGTTTTCTGGGCTGACACTGTTGGTGCTGGACATATCTATAGAAGTCTTAAGAAGTGGTCAGAACTATATGGTAATTTCTTCAAGCCCTCAAGGTTCTTGGAAGAGAGAGCAACAAAGGGCATTCCCTTGAGTGCTCCTTCTACGTCTTCAGTTTCAAGGTCACGCATGTAAGCAGTGTGTACTCAATGTTCCTACAACTGGGAAACAAGATGAATTTGAAATATAGACCTGTAGAGGGGCGCGTAGGTCATGCCTATAAGCAGTGCATGTATAGTGTATTGCAACATTTCCTTGGCTCCTAGTAGAGTTCATTTTCAAGTTAGTTGAGTGAATGCACCAACTTTATATATTCTACCCCCACCGAAGGGTATGTTTATTGGATAAACTGAACCTTTTTTGAAGTATGGCTGTTCATTTATCCAGCCATGTTAAACTTCTTTTCATTCGTATTATGCTTCCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g019670.2.1SL2.50ch07:12707105..12715893724+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g019670.2SL2.50ch07:12707106..127161829,077+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g019670.2.1.1SL2.50ch07:12707106..1270719994+n/a
exonexon:Solyc07g019670.2.1.10SL2.50ch07:12710076..12710250175+n/a
exonexon:Solyc07g019670.2.1.11SL2.50ch07:12710386..12710507122+2
exonexon:Solyc07g019670.2.1.12SL2.50ch07:12711874..12712037164+n/a
exonexon:Solyc07g019670.2.1.13SL2.50ch07:12712488..12712742255+1
exonexon:Solyc07g019670.2.1.14SL2.50ch07:12713836..12713957122+1
exonexon:Solyc07g019670.2.1.15SL2.50ch07:12714033..12714154122+2
exonexon:Solyc07g019670.2.1.16SL2.50ch07:12714308..12714456149+n/a
exonexon:Solyc07g019670.2.1.17SL2.50ch07:12715267..12715405139+1
exonexon:Solyc07g019670.2.1.18SL2.50ch07:12715852..12716182331+n/a
exonexon:Solyc07g019670.2.1.2SL2.50ch07:12707271..1270734272+2
exonexon:Solyc07g019670.2.1.3SL2.50ch07:12707714..1270777663+2
exonexon:Solyc07g019670.2.1.4SL2.50ch07:12707866..1270792257+2
exonexon:Solyc07g019670.2.1.5SL2.50ch07:12708055..1270812268+2
exonexon:Solyc07g019670.2.1.6SL2.50ch07:12708200..1270828182+n/a
exonexon:Solyc07g019670.2.1.7SL2.50ch07:12708380..1270843556+2
exonexon:Solyc07g019670.2.1.8SL2.50ch07:12708892..12709194303+n/a
exonexon:Solyc07g019670.2.1.9SL2.50ch07:12709285..1270937187+n/a
intronintron:Solyc07g019670.2.1.1SL2.50ch07:12707200..12707270n/a+n/a
intronintron:Solyc07g019670.2.1.10SL2.50ch07:12710251..12710385n/a+n/a
intronintron:Solyc07g019670.2.1.11SL2.50ch07:12710508..12711873n/a+n/a
intronintron:Solyc07g019670.2.1.12SL2.50ch07:12712038..12712487n/a+n/a
intronintron:Solyc07g019670.2.1.13SL2.50ch07:12712743..12713835n/a+n/a
intronintron:Solyc07g019670.2.1.14SL2.50ch07:12713958..12714032n/a+n/a
intronintron:Solyc07g019670.2.1.15SL2.50ch07:12714155..12714307n/a+n/a
intronintron:Solyc07g019670.2.1.16SL2.50ch07:12714457..12715266n/a+n/a
intronintron:Solyc07g019670.2.1.17SL2.50ch07:12715406..12715851n/a+n/a
intronintron:Solyc07g019670.2.1.2SL2.50ch07:12707343..12707713n/a+n/a
intronintron:Solyc07g019670.2.1.3SL2.50ch07:12707777..12707865n/a+n/a
intronintron:Solyc07g019670.2.1.4SL2.50ch07:12707923..12708054n/a+n/a
intronintron:Solyc07g019670.2.1.5SL2.50ch07:12708123..12708199n/a+n/a
intronintron:Solyc07g019670.2.1.6SL2.50ch07:12708282..12708379n/a+n/a
intronintron:Solyc07g019670.2.1.7SL2.50ch07:12708436..12708891n/a+n/a
intronintron:Solyc07g019670.2.1.8SL2.50ch07:12709195..12709284n/a+n/a
intronintron:Solyc07g019670.2.1.9SL2.50ch07:12709372..12710075n/a+n/a
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