Solanum lycopersicum mRNA Solyc07g020790.2.1
 mRNA details
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| Name | Type |
Length
1,918
|
Organism |
|
Description
D-xylose-proton symporter (D-xylose transporter) (AHRD V1 **** B5CJI7_SALET); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
|
|
Location(s)
SL2.50ch07:13483462..13489718
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- GO:0016021
- Length
- 6257
- Nb exon
- 15
- Sifter term
- GO:0015519
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g020790.2.1 D-xylose-proton symporter (D-xylose transporter) (AHRD V1 **** B5CJI7_SALET); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
CAAGACGATGATGAGGTGTTGGAAAGAGAAGAAAAATTAATAAAGACAAAAAGCAAAAAAAAAGTAGAGAGGAAAAGGTGCAATGTCGGAGCAGGAGGCGTATATTTGCAGCAACAAAAAGGCATCTATCGATCTCTCTTCTTTTATACATACAAGTTGCATTGCTTGCAGTTTGGTATGAGAAGAGGATTTTTCTTGTAGCGGGAACAGTTCATCCTCAATGTATAAGCGTATGACATCCAGAGATTCCATGAGTGCTGATGTTGAAGCTGTTTCAGTTCTTCTTCAGAATGGTGTACAAAAAGAGATGACAAATCCCTCTTGGAAGTATTCGTGTCCACATGTACTTGTAGCAACAATAGTTGCACTTCTGTTTGGCTATCATCTTGGGGTAGTGAATGAACCACTTGAAATTATTTCAGTTGATCTTGGATTCAGCGGGGATACATTGGCGGAAGGTCTGGTGGTGAGTACGTGTCTGGCCGCTGCCTTTGCTGGATCCTTGATAAGTGGTTGGATTGCTGATGGAGTTGGCCGTCGTCGAGCCTTTCAGTTGTGCTCATTGCCTATGCTTTTGGGTGCTTCTATATGTGCAACTGCCAAAACCCTAGCAGGCATGCTTGCAGGAAGATTTTTAGTGGGATTAGGATTGGGCGTGGGTCCTCCGGTTGCTTCTCTTTACGTTGCAGAGGTTTCTCCTGCTCATGTGAGGGGTACTTACGGGAGTTTGATTCAAATAGCAACATGTCTTGGGCTGATGGCAGCTCTTGTTCTAGGGATCCCCGTCAAGAATATAGTGGGTTGGTGGCGTGTATGTTTTTGGTTGTCTACTATTCCTGCTGCAATACTTGCACTTGCTATGATGTTTTGTGTTGAGTCCCCTCATTGGCTATATAAGCGAGGAAAACTTGCTGAGGCTGAATTCGAGTTTGAGAGGCTTCTAGGAAGTTCACATGTTAAGAGTGCAATGCTAGAGCTTTCGAAGTCGAATAGAGAGGACGAAACTGAAAGTGTTAAGATCTCTGAATTGCTCCATGGACGGCATTCTAGAGTTGTTTTTATTGGGGCAACCCTATTTGCTTTACAACAGCTATCTGGAATAAATGCTGTGTTTTATTTCTCTTCAACTGTATTTAGACGTGCCGGAGTATCCTCGAACCTGGCAAATGTTTTTATTGGGATTGCAAACTTGACAGGGTCAATTGTGGCCTTGGTTCTGATGGACAAATTAGGAAGGAAAGTCCTCCTTCATTGGAGCTTCTTTGGAATGGCTTTGGCCATGGCCCTTCAAGTGTTTGCTTCAAGTGGGATTGCATCAAATTATGGAGCTTTTTACTTCTCTGTTGGTGGCATGCTGCTGTTTGTCTTGACATTTGCTGTTGGAGCTGGTCCAGTTCCTGGTCTCCTCCTCCCAGAAATATTTCCCAGTCGAATTAGGGCTAAGGCTATGGCATTTTGTATGTCAGTTCACTGGGTGGTTAACTTTTTTGTTGGACTGATGTTCTTGCGCTTGCTCGACCAACTTGGGCCACACTTACTATACTCCATATTTGGCACCTTCTGCCTGATGGCCGTGGTATTTGTAAAGAGGAGTGTGATGGAGACAAAGGGAAAGTCACTTCAAGAAATTGAGATTGCCCTTCTTCCACAAGAATATAGAGAATTCTTGTGAGAAGAAATCAACACCCAAGTGTTTTCCAGGTTTGCAAGTAAATGGAAGGTGACCAGCAAATATTTCTACTTAGTCTTGCCACTCATCCTGATCGTTGCAAGTCTTTATACAACTGTTTCTGGCAGTAGTAGCTTTTTTCAAGCAGCCTGCAGGATGCTCTGCAAATAGAGTTAAATAGAATAACTATTGGGTTGTGGTCTCTTAGCAGCTCCTAGTATATGGCGGCAGAATTGTTGCTCCACGTCC
CAAGACGATGATGAGGTGTTGGAAAGAGAAGAAAAATTAATAAAGACAAAAAGCAAAAAAAAAGTAGAGAGGAAAAGGTGCAATGTCGGAGCAGGAGGCGTATATTTGCAGCAACAAAAAGGCATCTATCGATCTCTCTTCTTTTATACATACAAGTTGCATTGCTTGCAGTTTGGTATGAGAAGAGGATTTTTCTTGTAGCGGGAACAGTTCATCCTCAATGTATAAGCGTATGACATCCAGAGATTCCATGAGTGCTGATGTTGAAGCTGTTTCAGTTCTTCTTCAGAATGGTGTACAAAAAGAGATGACAAATCCCTCTTGGAAGTATTCGTGTCCACATGTACTTGTAGCAACAATAGTTGCACTTCTGTTTGGCTATCATCTTGGGGTAGTGAATGAACCACTTGAAATTATTTCAGTTGATCTTGGATTCAGCGGGGATACATTGGCGGAAGGTCTGGTGGTGAGTACGTGTCTGGCCGCTGCCTTTGCTGGATCCTTGATAAGTGGTTGGATTGCTGATGGAGTTGGCCGTCGTCGAGCCTTTCAGTTGTGCTCATTGCCTATGCTTTTGGGTGCTTCTATATGTGCAACTGCCAAAACCCTAGCAGGCATGCTTGCAGGAAGATTTTTAGTGGGATTAGGATTGGGCGTGGGTCCTCCGGTTGCTTCTCTTTACGTTGCAGAGGTTTCTCCTGCTCATGTGAGGGGTACTTACGGGAGTTTGATTCAAATAGCAACATGTCTTGGGCTGATGGCAGCTCTTGTTCTAGGGATCCCCGTCAAGAATATAGTGGGTTGGTGGCGTGTATGTTTTTGGTTGTCTACTATTCCTGCTGCAATACTTGCACTTGCTATGATGTTTTGTGTTGAGTCCCCTCATTGGCTATATAAGCGAGGAAAACTTGCTGAGGCTGAATTCGAGTTTGAGAGGCTTCTAGGAAGTTCACATGTTAAGAGTGCAATGCTAGAGCTTTCGAAGTCGAATAGAGAGGACGAAACTGAAAGTGTTAAGATCTCTGAATTGCTCCATGGACGGCATTCTAGAGTTGTTTTTATTGGGGCAACCCTATTTGCTTTACAACAGCTATCTGGAATAAATGCTGTGTTTTATTTCTCTTCAACTGTATTTAGACGTGCCGGAGTATCCTCGAACCTGGCAAATGTTTTTATTGGGATTGCAAACTTGACAGGGTCAATTGTGGCCTTGGTTCTGATGGACAAATTAGGAAGGAAAGTCCTCCTTCATTGGAGCTTCTTTGGAATGGCTTTGGCCATGGCCCTTCAAGTGTTTGCTTCAAGTGGGATTGCATCAAATTATGGAGCTTTTTACTTCTCTGTTGGTGGCATGCTGCTGTTTGTCTTGACATTTGCTGTTGGAGCTGGTCCAGTTCCTGGTCTCCTCCTCCCAGAAATATTTCCCAGTCGAATTAGGGCTAAGGCTATGGCATTTTGTATGTCAGTTCACTGGGTGGTTAACTTTTTTGTTGGACTGATGTTCTTGCGCTTGCTCGACCAACTTGGGCCACACTTACTATACTCCATATTTGGCACCTTCTGCCTGATGGCCGTGGTATTTGTAAAGAGGAGTGTGATGGAGACAAAGGGAAAGTCACTTCAAGAAATTGAGATTGCCCTTCTTCCACAAGAATATAGAGAATTCTTGTGAGAAGAAATCAACACCCAAGTGTTTTCCAGGTTTGCAAGTAAATGGAAGGTGACCAGCAAATATTTCTACTTAGTCTTGCCACTCATCCTGATCGTTGCAAGTCTTTATACAACTGTTTCTGGCAGTAGTAGCTTTTTTCAAGCAGCCTGCAGGATGCTCTGCAAATAGAGTTAAATAGAATAACTATTGGGTTGTGGTCTCTTAGCAGCTCCTAGTATATGGCGGCAGAATTGTTGCTCCACGTCC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g020790.2.1 | SL2.50ch07:13483707..13489290 | 480 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g020790.2 | SL2.50ch07:13483462..13489718 | 6,257 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g020790.2.1.1 | SL2.50ch07:13489516..13489718 | 203 | - | n/a |
| exon | exon:Solyc07g020790.2.1.10 | SL2.50ch07:13485740..13485883 | 144 | - | 2 |
| exon | exon:Solyc07g020790.2.1.11 | SL2.50ch07:13485543..13485616 | 74 | - | n/a |
| exon | exon:Solyc07g020790.2.1.12 | SL2.50ch07:13484885..13484973 | 89 | - | 1 |
| exon | exon:Solyc07g020790.2.1.13 | SL2.50ch07:13484232..13484346 | 115 | - | n/a |
| exon | exon:Solyc07g020790.2.1.14 | SL2.50ch07:13483864..13484049 | 186 | - | n/a |
| exon | exon:Solyc07g020790.2.1.15 | SL2.50ch07:13483462..13483719 | 258 | - | n/a |
| exon | exon:Solyc07g020790.2.1.2 | SL2.50ch07:13489245..13489319 | 75 | - | 2 |
| exon | exon:Solyc07g020790.2.1.3 | SL2.50ch07:13488880..13488991 | 112 | - | 1 |
| exon | exon:Solyc07g020790.2.1.4 | SL2.50ch07:13488714..13488781 | 68 | - | 2 |
| exon | exon:Solyc07g020790.2.1.5 | SL2.50ch07:13488503..13488635 | 133 | - | 1 |
| exon | exon:Solyc07g020790.2.1.6 | SL2.50ch07:13486761..13486860 | 100 | - | n/a |
| exon | exon:Solyc07g020790.2.1.7 | SL2.50ch07:13486560..13486672 | 113 | - | 1 |
| exon | exon:Solyc07g020790.2.1.8 | SL2.50ch07:13486364..13486457 | 94 | - | n/a |
| exon | exon:Solyc07g020790.2.1.9 | SL2.50ch07:13485960..13486113 | 154 | - | 2 |
| intron | intron:Solyc07g020790.2.1.10 | SL2.50ch07:13485884..13485959 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.11 | SL2.50ch07:13485617..13485739 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.12 | SL2.50ch07:13484974..13485542 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.13 | SL2.50ch07:13484347..13484884 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.14 | SL2.50ch07:13484050..13484231 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.15 | SL2.50ch07:13483720..13483863 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.2 | SL2.50ch07:13489320..13489515 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.3 | SL2.50ch07:13488992..13489244 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.4 | SL2.50ch07:13488782..13488879 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.5 | SL2.50ch07:13488636..13488713 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.6 | SL2.50ch07:13486861..13488502 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.7 | SL2.50ch07:13486673..13486760 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.8 | SL2.50ch07:13486458..13486559 | n/a | - | n/a |
| intron | intron:Solyc07g020790.2.1.9 | SL2.50ch07:13486114..13486363 | n/a | - | n/a |
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