Solanum lycopersicum mRNA Solyc07g039570.2.1

mRNA details  
Name
Solyc07g039570.2.1
Type
mRNA
Length
1,869
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *--* Q9M4A8_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch07:47885427..47890261
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4835
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g039570.2.1 Transcription factor (AHRD V1 *--* Q9M4A8_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGACTCCATCTTCTTTCTTGAAGAAGGAGACCGCACCGTCTTTCTATTAAAGATAATGGAGTCATTTGGTTGCACTTACATATGCCTTTGGCAATACTTTCAACCTTCCAACACTTTCATGTCCTTGGGTGGAATCTACAATGGAGAAAATGTCGTTGCCCAGAGATTATTTGAAGAATATAAGCATTCATGGCTTATCATGGATAACGGCCGCATTCCAGGACTGGCCTTCAAGAACAATGTTCCTTATATGGAACTGAAGTTTGCTGATCTTCAATCTCATGCATCCAATCCAGTTCAGCTTCAATTCTATTACACAACTATATGTATGGGATGCAGCATAGGAGAAATTGAATTTGGAATGACTTCTAGCCCTCAAGTAAATTTGGAAATGGGGATGAAAAACTTATTTCCGGAATACTTCTCAACAAGATTAGTACTTGCTCGTCCTCAGACATTGCTGACAAATATTGATCAAAACAGACCATCGCCATCTTCATCATTCTCTCTCGATAGCCCAGGAGAATACTCATCGCTTCTATTCAATGTTGCAACTACATCTTACGTACCAGATGCCTTTCCAGAGCAGACCGTAAGACCAGTTTCTACCAGCGCGATGCCATTCCATCAACAACAACCTATTCAGACACTAACTCAACTCAGAGGCATTCAATTCCCTGGGGTAGAAACTGATGATGCTGCATTGACAAGAGCGTATCTTGCTGTTATGACTTCACCTTCTTCTTCATCTTCATCTCATCAATCGCGAGAAAATATTGATGTACCAATAACGGATTATCATTATCAAAAGTCCACTGCATTCAGAAGGTTTGGACCAGGTTTAGGTCGTCCTAGTAATGTGCAAATAGGCACATCCAGAACAATTCGTCGAGAAAACATATTGAGAAGATCAATTATATTCTTCAGGAATTTAGATATGATGAGAAGGAAAGAACAAATCCAGGCGAATCAGCGTGCCCTTACTAGCACTCAAGTTCATCATATGATTTCAGAAAGAAAAAGACGTGAAAAGCTTAACGATAGCTTTCAACTACTTAGATCTTTACTCCCTCCTGGTACAAAGAAGGACAAAGCATCTGTTCTTGCTAGTACAACAGAATACATAACTTGTTTGAAAGATCAAGTGGAAGAACTTAGCAAAAAGAATGAAATAATGCTGAATGCACAGGCGTTAGATAAATCATCGATGATGAAATCGAATGACGTTGGTGATGGAAATGATGAAAGGGTAGTTGTTGAAATAATAAAAAATGTAAGTAGTGAATCAGAATCAAGAACAGTGGAATTGCAAGTTTCAGTAAGATCAGGAGAATGCAACGTGTTGGATTTGGCCACTCGTTTGCTCGAGTTCTTGAAAACTCAAGACAATTTAAGCTTACAGTCAGTAGCAGCAAACACTAGGCCATCCATGGTTACTCACGTAAGTTTGACAATTACAATTCAGGGTAGTGAATGGGACGAGTCTGGTTTCGAGGAAGCAGTGAAAAGGGTTGTTGATGACTTGACATAGAGGAACTTGTCAAAGTTGGTAGGCCCATCAAATTTTGACTGGCGGCGCCTCGTATTACGACTATTTCCCCCTATTATACTTTACTTAAATTATAGTGTCATAGAGATCATCAATTAATATCCTAAAATTACAATTTTGTTGCTAGTTTTACTTCCTACTAGTGTGTATTCATGTTTTATTTCATTTACTAATGTTTAATATCTAACCATTTTAGTTTAAAATCCTTTTTTAAAAGTATATATATGTATGCTATGACAGTGTATCGGTCAATTTCGATTCTATTTTGAAGTTTATTGGTTTGTAGACATGCTAAATCATTATAGAAACATCTCAGAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g039570.2.1SL2.50ch07:47885426..47889925511+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g039570.2SL2.50ch07:47885427..478902614,835+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g039570.2.1.1SL2.50ch07:47885427..47885539113+n/a
exonexon:Solyc07g039570.2.1.2SL2.50ch07:47885644..4788574299+1
exonexon:Solyc07g039570.2.1.3SL2.50ch07:47885826..47885931106+1
exonexon:Solyc07g039570.2.1.4SL2.50ch07:47886130..4788619263+n/a
exonexon:Solyc07g039570.2.1.5SL2.50ch07:47886267..47886971705+n/a
exonexon:Solyc07g039570.2.1.6SL2.50ch07:47887401..47887781381+n/a
exonexon:Solyc07g039570.2.1.7SL2.50ch07:47889860..47890261402+n/a
intronintron:Solyc07g039570.2.1.1SL2.50ch07:47885540..47885643n/a+n/a
intronintron:Solyc07g039570.2.1.2SL2.50ch07:47885743..47885825n/a+n/a
intronintron:Solyc07g039570.2.1.3SL2.50ch07:47885932..47886129n/a+n/a
intronintron:Solyc07g039570.2.1.4SL2.50ch07:47886193..47886266n/a+n/a
intronintron:Solyc07g039570.2.1.5SL2.50ch07:47886972..47887400n/a+n/a
intronintron:Solyc07g039570.2.1.6SL2.50ch07:47887782..47889859n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17875831%2Fdetails feature 17875831
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