Solanum lycopersicum mRNA Solyc07g041900.2.1

mRNA details  
Name
Solyc07g041900.2.1
Type
mRNA
Length
1,433
Organism
Solanum lycopersicum
Description
Cathepsin L-like cysteine proteinase (AHRD V1 **** A7LJ78_DERVA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain IPR000169 Peptidase, cysteine peptidase active site
Location(s)
SL2.50ch07:54505239..54507568
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0008234
  • GO:0045449
Length
2330
Nb exon
7
Sifter term
  • GO:0030984
  • GO:0004197
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g041900.2.1 Cathepsin L-like cysteine proteinase (AHRD V1 **** A7LJ78_DERVA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain IPR000169 Peptidase, cysteine peptidase active site

CTCCTCTATTCCAACAATCCTTCCCACATTACAATAATTACAATGTCACGTCTCTCGCTCGTATTGATTCTCGTCGCCGGCCTTTTCGCTACTGCACTTGCCGGTCCGGCGACCTTCGCTGATAAGAATCCGATCAGGCAAGTCGTATTTCCCGATGAGCTGGAGAACGGGATTCTTCAAGTCGTCGGCCAGACTCGCAGTGCTCTCTCCTTCGCTCGCTTTGCTATCAGGCATCGGAAAAGGTATGACTCCGTTGAAGAGATCAAGCAAAGGTTTGAGATATTTTTGGACAATCTGAAGATGATCCGATCGCATAACAGAAAAGGACTATCATACAAACTCGGTATCAATGAGTTTACCGACCTAACATGGGATGAGTTCCGTAAACACAAGTTGGGGGCATCTCAAAACTGTTCTGCCACCACAAAGGGAAATCTCAAGCTCACTAACGTCGTTCTGCCAGAGACGAAAGACTGGAGGAAAGATGGTATTGTTAGCCCAGTGAAGGCACAGGGCAAGTGCGGATCTTGCTGGACATTCAGCACTACTGGTGCACTAGAGGCAGCCTATGCCCAAGCATTTGGGAAGGGAATCTCTCTGTCAGAGCAGCAGCTTGTGGACTGTGCTGGAGCTTTTAATAACTTTGGTTGCAATGGAGGGTTGCCTTCTCAAGCATTTGAGTACATTAAATTCAATGGTGGTCTTGACACTGAAGAAGCATATCCATACACCGGCAAGAATGGCATATGTAAATTCTCACAAGCAAATATTGGTGTCAAAGTCATCAGTTCTGTCAATATTACCCTGGGTGCTGAATATGAACTGAAATACGCAGTTGCATTGGTTAGGCCTGTTAGTGTTGCTTTTGAGGTGGTAAAAGGGTTCAAACAGTACAAGAGCGGAGTTTACGCCAGCACTGAATGTGGCGACACTCCCATGGACGTAAACCATGCTGTTCTTGCTGTGGGTTACGGTGTTGAAAATGGTACTCCCTACTGGCTCATAAAGAACTCATGGGGAGCAGATTGGGGTGAGGATGGATACTTCAAAATGGAGATGGGAAAGAATATGTGTGGTGTTGCAACTTGTGCATCCTACCCAATCGTTGCCTAAGCTTTGGAGTTTTGTGAAAAAAATCTGCATAAATCCGTGTTGTCCCAGTTAATGATTCAGCAGCAGCATTCAGGCTCCATTCTCAGATTTATATTCTGAACATGTATGGATTGTTATACATATAAAAATGGTTTAGGCTACTTATATGAAAGAAACAATAAGATCAAAATATTTAGTTCACAGAGTTTATTATGCAGGAAAAAACCCTATGTAATTTATACCATTATAAGTAATGAAATGGAAGAAGAATTTCTTATTGTAAACATTGTTAATAAGGTGTTGTCCTTAGTTCGTGTCTTTTTGTCAAAATTGTTAATGGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g041900.2.1SL2.50ch07:54505558..54507526357-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g041900.2SL2.50ch07:54505239..545075682,330-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g041900.2.1.1SL2.50ch07:54507339..54507568230-1
exonexon:Solyc07g041900.2.1.2SL2.50ch07:54507133..54507254122-2
exonexon:Solyc07g041900.2.1.3SL2.50ch07:54506760..54506875116-n/a
exonexon:Solyc07g041900.2.1.4SL2.50ch07:54506452..5450652574-1
exonexon:Solyc07g041900.2.1.5SL2.50ch07:54506107..54506371265-n/a
exonexon:Solyc07g041900.2.1.6SL2.50ch07:54505837..54505968132-n/a
exonexon:Solyc07g041900.2.1.7SL2.50ch07:54505239..54505732494-n/a
intronintron:Solyc07g041900.2.1.2SL2.50ch07:54507255..54507338n/a-n/a
intronintron:Solyc07g041900.2.1.3SL2.50ch07:54506876..54507132n/a-n/a
intronintron:Solyc07g041900.2.1.4SL2.50ch07:54506526..54506759n/a-n/a
intronintron:Solyc07g041900.2.1.5SL2.50ch07:54506372..54506451n/a-n/a
intronintron:Solyc07g041900.2.1.6SL2.50ch07:54505969..54506106n/a-n/a
intronintron:Solyc07g041900.2.1.7SL2.50ch07:54505733..54505836n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17877018%2Fdetails feature 17877018
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