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Solanum lycopersicum mRNA Solyc07g042270.2.1

mRNA details  
Name
Solyc07g042270.2.1
Type
mRNA
Length
2,147
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 **** C6LZE8_GIALA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch07:55397795..55404455
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
6661
Nb exon
10
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g042270.2.1 ATP-dependent RNA helicase (AHRD V1 **** C6LZE8_GIALA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TGACAAGCTGAAGTGAAGAAACAATGGAGCTAAACCTTAACAAGAGGAAAAAGCAAAAGACTGACAACAGCTCAACCGGCAACTCTGAGGTTTTCGCTTCTTGCACTTTCGAAAGTCTCGGTCTTCACACTACCTTATGCGATCAGCTCAAAGAGAGGCTTGGATTCGAGGCTCCAACTCTTGTTCAAGCTCAAGCAATTCCTGTTATACTCTCTGGTCGACATGTGCTAGTGAATGCGGCTACCGGAACGGGGAAAACTGTGGCTTATTTGGCTCCAGTAATTCATCAGTTGCAGAAGTGTGATCCCAGGATTCAGCGGTCTGATGGTACTTTTGCGTTGGTTCTTGTGCCAACACATGAATTATGCATGCAGGTATATGAGATCTTGCAGAAGTTGTTGCATCGTTTTCACTGGATTGTTCCTGGATATATTATGGGAGGGGAAAGCAGGAACAAAGAGAAAGCTAGATTGCGAAAAGGTATATCTATTCTTGTTGCAACTCCTGGACGGCTTTTGGATCACCTAAAAAATACATCATCATTCTTGCACACAAACCTGCGCTGGATAATTTTTGATGAAGCAGACAGAATTCTGGAGCTTGGATATGGTAAAGAGATTGAAGACATACTTAATATTCTGGGCTCAAAACAACAAAAATCTGTTGGCAAGGGTAACACAACTTCACAGATTTCTGAGGTTCAGAGACAAAATGTGTTGTTATCTGCTACATTAAACGAGAAAGTAAATCATCTCGCGGAAATTAGTTTAGATAACCCCGTGATGGTTGGGCTTGACAAGAAAATAGAGCTACAATTAACTCATCAAGACGTCAAACCAATGGAATTTAATGGGAATGATATATTAGGAAAAGATGGCAAACTACTGAGCTCTTCAACTGAAGAATATAAGCTTCCGACTCAGCTACTTCAGAGATATATTAAAGTCCCCTGTGGTTCACGGCTTGTAGTGCTTCTTGCAATTCTAAAACATCTGTTTGAGAAGGAACCTTCCCAGAAGGTTGTGGTGTTCTTTTCAACATGTGATGCTGTAGATTTTCATTATTCATTGGTGAGTGGATTTCAGTGGCTCTCTCGTCAGCAATCAGATACAGATGTCAAACAGCTGTTTTTGAAATGCAACACATTTCGGTTACATGGGAATATGAATCACGAAGACAGAAGAACTACATTCCATGCTTTTAAAACAGAAAAATCAGCACTTCTGCTATCCACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAGGTGTATTATACAGTATGATCCTCCAGGAGAGGCAACTGAATATGTGCATCGGGTAGGAAGAACCGCTCGTATAGGTGAAAAGGGAGATTCCTTATTGTTCCTACAGCCAGTTGAAACTGATTACTTGCCTGGCTTAGAGAAACACGGGGTGACGCTAACAGAGTATCCCCTTCAGAAACTTTTGGATAGCTTTCCGTTGTTTGGTATCAGGTACCACCCGAAGAATTTTGTTTCAGTAGACACACATCCCTGGGTTGTTTCTCTGCAGAAAGCATTGGAATCCTTTACTTCATCAGAGTTAAAGATGAAGAAAATAGCACAGAATGCATTTTGCTCATGGGTTCGTGCTTACACTGCCCATCGTGGTGAACTTAAAGGAATTTTTATGGTGAAGAAACTTCACTTGGGGCATGTGGCAAGAAGTTTTGCATTGAAGGAGCAGCCGTCATTGGTTAATAAATCCCTCCAAAAACAAACAAAGAAAAGGATGAGAGACCAGAAACAGACAAACGTATCAAAAAAGAGAAAAGTCGGAAAAAGATGATGTGTAACATTTGTTATCAGATGAGCTTGTCAAATTGGATTCAATGATATGTACACAAGCATTTCTGTCTAGCATGTCCAACTGTCCTGCGTCTCTACCAATGGTGCATGTCCTCTGATGAGCTCTGATATAATCAGGTTTTGTGGAGGGATTAAAGGTAGTACTATTTGCTGACCTTGAGATTGTGCTAGCAGCTTGCAAACATATGCTCCATCTGGTGAGAATGTATCAGTTCTAACTATAAGCAGGGGGCATATTATTAGCATTTTGATTATGCCACCAAAAGTTTTGTATACTCTAGGAATCCCTGTACCCAAAATATTTAATACC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g042270.2.1SL2.50ch07:55398124..55404432598-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g042270.2SL2.50ch07:55397795..554044556,661-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g042270.2.1.1SL2.50ch07:55404303..55404455153-2
exonexon:Solyc07g042270.2.1.10SL2.50ch07:55397795..55398370576-n/a
exonexon:Solyc07g042270.2.1.2SL2.50ch07:55404123..5540419573-1
exonexon:Solyc07g042270.2.1.3SL2.50ch07:55403906..55404015110-2
exonexon:Solyc07g042270.2.1.4SL2.50ch07:55403371..55403514144-2
exonexon:Solyc07g042270.2.1.5SL2.50ch07:55401377..55401485109-1
exonexon:Solyc07g042270.2.1.6SL2.50ch07:55400936..55401291356-2
exonexon:Solyc07g042270.2.1.7SL2.50ch07:55400754..5540082774-n/a
exonexon:Solyc07g042270.2.1.8SL2.50ch07:55400323..55400627305-1
exonexon:Solyc07g042270.2.1.9SL2.50ch07:55399111..55399357247-n/a
intronintron:Solyc07g042270.2.1.10SL2.50ch07:55398371..55399110n/a-n/a
intronintron:Solyc07g042270.2.1.2SL2.50ch07:55404196..55404302n/a-n/a
intronintron:Solyc07g042270.2.1.3SL2.50ch07:55404016..55404122n/a-n/a
intronintron:Solyc07g042270.2.1.4SL2.50ch07:55403515..55403905n/a-n/a
intronintron:Solyc07g042270.2.1.5SL2.50ch07:55401486..55403370n/a-n/a
intronintron:Solyc07g042270.2.1.6SL2.50ch07:55401292..55401376n/a-n/a
intronintron:Solyc07g042270.2.1.7SL2.50ch07:55400828..55400935n/a-n/a
intronintron:Solyc07g042270.2.1.8SL2.50ch07:55400628..55400753n/a-n/a
intronintron:Solyc07g042270.2.1.9SL2.50ch07:55399358..55400322n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17877433%2Fdetails feature 17877433
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