Solanum lycopersicum mRNA Solyc07g043580.2.1

mRNA details  
Name
Solyc07g043580.2.1
Type
mRNA
Length
1,818
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch07:57503383..57506337
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2955
Nb exon
8
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g043580.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGGATTTGATCATGAGCTAGTGGAGTTGTTGTGGCGAAACGGGGAGGTAGTATTACATAGCCAAACACATAAAAAACAGCCAGGTTATGATCCTAATGAATGCAGACAGTTTAACAAACATGATCAACCAACAATAAGAGTTGCTGGAAATCAGACTAATTTGATTCAAGATGATGAAACTGTCGCGTGGCTAAACTGCCCTATCGATGATTCGTTTGACAAAGAATTTTGTTCCCCTTTCTTATCTGATATTTCAACAAATCCTCACCTGGGGGAGGAGCCTGATAAGTCAATTAGGCAATCAGAGGACAATAACAAGGTTTTCAAGTTTGATCCTTTAGAGATCAACCATGTTCTTCCGCAATCACATCATTCTGGTTTCGATCCAAATCCAATGCCACCTCCAAGATTTCACAACTTTGGATCAGCGCAACAGAAACATCATATAGTAGGGGGGGATCAGAAAGGTGTTAACTTTCCTCCACCGATAAGGTCATCCAATGTGCAGCTTGGTGGCAAAGAAGCTAGAAGCAATCTGATGCTGCAAGATATTAAAGAGGGGTCTGTGATGACAGTTGGTTCAAGCCACTGTGGCAGCAATCAAGTTGATACTAGCCGGTTTTCAAGTAGTGCAAATAGAGGGCTGTCTGCAGCAATGATCACTGATTATACCGGAAAAATCAGTCCACAAAGTGATACAATGGACCGAGACACATTTGAACCAGCTAATACATCTTCGTCTTCAGGAAGATCGGGTAGTAGTTATGCAAGAGCATGCAATCAATCTACAGCGACCAATAGCCAGGGCCACAAAAGGAAGAGTAGAGATGGTGAAGAACCAGAATGCCAGAGTAAAGCTGATGAGCTAGAATCAGCTGGAGGAAACAAGTCAGCCCAAAAATCTGGAACTGCCCGAAGGAGCCGTGCTGCAGAAGTGCATAATCTCTCTGAAAGGAGACGGAGGGATAGAATCAATGAGAAAATGAAGGCCTTGCAAGAGCTTCTTCCTCACTCTACTAAGACAGACAAAGCATCAATGCTGGATGAGGCTATTGAATACTTGAAATCACTTCAGATGCAACTGCAGATGATGTGGATGGGAAGTGGCATGGCATCAATGATGTTCCCTGGTGTCCAACACTACATTTCCAGAATGGGAATGGGGATGGGTCCGCCTTCGGTGCCTTCCATGCACAATGCTATGCATTTAGCTAGGCTTCCTTTGGTTGATCCAGCAATCCCTTTGACACAAGCTGCCCCTAATAATCAAGCAGCTGCAATGTGCCAGAATTCAATGTTGAATCAAGTTAACTATCAACGCCATTTGCAGAATCCCAATTTTCCAGATCAATATGCTAGTTACATGGGGTTCCATCCACTTCAAGGCGCTTCTCAGCCTATAAACATTTTTGGCTTAGGTTCACATACAGCACAGCAAACTCAGCAGTTACCGCATCCAACTAATAGTAATGCACCTGCCACTTGAAGAGTTATCACTGAGGATACTATCAGTGTAAAATTAGGACAGTGAAATTGCTTCATTTTGCGTAATGTTTATCATGGTACTAGACTCTAGCAATCACTACTGGAAGATCTTAAGATTTTGGGAGCTAACGTTCAAATATGTAAGAGACAACGACACCATCATAATGAAATACATGAACTTCATTGTATGAGACTCTTCTTCATATAGCAAAGCTACAAGTTTTATTCTGTAGGAGCACATTAGTAGTTGGCATATGTAACTTACTGTATATGAAAAAATTTACTGAGGAATAAGAATTCATTAAGTCTTTACATACTGATTTCTTTTTGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g043580.2.1SL2.50ch07:57503382..57505762496+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g043580.2SL2.50ch07:57503383..575063372,955+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g043580.2.1.1SL2.50ch07:57503383..575033875+n/a
exonexon:Solyc07g043580.2.1.2SL2.50ch07:57503488..57504340853+1
exonexon:Solyc07g043580.2.1.3SL2.50ch07:57504420..5750451899+n/a
exonexon:Solyc07g043580.2.1.4SL2.50ch07:57504612..5750467766+n/a
exonexon:Solyc07g043580.2.1.5SL2.50ch07:57504947..5750501266+n/a
exonexon:Solyc07g043580.2.1.6SL2.50ch07:57505260..57505568309+n/a
exonexon:Solyc07g043580.2.1.7SL2.50ch07:57505673..57505799127+n/a
exonexon:Solyc07g043580.2.1.8SL2.50ch07:57506045..57506337293+n/a
intronintron:Solyc07g043580.2.1.1SL2.50ch07:57503388..57503487n/a+n/a
intronintron:Solyc07g043580.2.1.2SL2.50ch07:57504341..57504419n/a+n/a
intronintron:Solyc07g043580.2.1.3SL2.50ch07:57504519..57504611n/a+n/a
intronintron:Solyc07g043580.2.1.4SL2.50ch07:57504678..57504946n/a+n/a
intronintron:Solyc07g043580.2.1.5SL2.50ch07:57505013..57505259n/a+n/a
intronintron:Solyc07g043580.2.1.6SL2.50ch07:57505569..57505672n/a+n/a
intronintron:Solyc07g043580.2.1.7SL2.50ch07:57505800..57506044n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17878612%2Fdetails feature 17878612
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