Solanum lycopersicum mRNA Solyc07g043620.2.1
 mRNA details
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| Name | Type |
Length
1,849
|
Organism |
|
Description
Auxin response factor 6-1 (AHRD V1 **** D9IUY5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
|
|
Location(s)
SL2.50ch07:57561281..57566695
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- GO:0006355
- Length
- 5415
- Nb exon
- 12
- Sifter term
- GO:0003700
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g043620.2.1 Auxin response factor 6-1 (AHRD V1 **** D9IUY5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
ATGAGGGTATCATCATCTGGGTTCAATCCTCAGCCAGAGGAAGCAGCAGGGGAGAAGAAATGCTTGAATTCAGAGTTGTGGCACGCGTGTGCAGGACCACTAGTTTCACTTCCACCTGTAGGAAGCAGAGTTGTGTATTTTCCTCAAGGGCATAGTGTGCAGGTTGCTGCCTCAACCAACAAGGAAGTAGATGCTCATATCCCTAATTATCCTGGTTTACCGCCTCAACTAATTTGTCAGCTGCACAACTTGACAATGCATGCAGATGTTGAGACTGATGAAGTATATGCTCAAATGACATTGCAGCCACTAAGTCCACAAGAGCAGAAGGATGTGTGCCTGCTACCGGCAGAACTTGGCATCCCGAGTAAACAACCAACCAACTATTTCTGTAAAACTTTGACGGCAAGTGACACCAGTACTCATGGTGGATTCTCTGTCCCTCGCCGAGCCGCAGAAAAAGTTTTTCCCCCTCTTGATTACTCTCAGCAGCCACCCTGTCAAGAGTTGATTGCAAAAGATCTCCATGGGAACGAATGGAAATTACGGCATATTTTTCGCGGACAACCAAAGAGGCATCTATTGACAACCGGATGGAGTGTGTTTGTGAGTGCAAAGAGACTTGTTGCAGGCGATGCAGTCATCTTTATCTGGAACGAAAACAATCAATTGCTTTTGGGGATTCGACGTGCTAATCGTCCTCAAACTCTCATGCCTTCTTCAGTCTTGTCAAGTGATAGCATGCACATTGGTCTCCTGGCTGCAGCAGCTCATGCAACTGCAACTAATACTCGCTTTACAATATTTTATAATCCAAGGGCCAGCCCATCAGAGTTTGTCATACCTCTTGCCAAGTATGCTAAAGCAGTGTATCATACTCGAATCTCTGTTGGTATGAGGTTCCGGATGCTGTTTGAAACAGAAGAATCAAGTGTTCGTAGGTATATGGGCACAATTACTGGCATCAGTGATCTAGATCCTGTTTGTTGGCCAAATTCACACTGGCGGTCTGTGAAGGTTGGATGGGATGAATCTACTGCTGGAGAAAGGCAGCCCAGAGTTTCTCTATGGGAAATTGAACCTCTGACAACATTTCCTATGTATCCTTCTCCTTTCTCCCTTAGGCTAAAGCGGCCTTGGCCATCTGGACTACCTTCTCTCCCTGGTTTTCCAAATGTTGGTTTGACTATGAATTCTCCACTCTCATGGCTACGTGGTGACATGGGAGATCAAGGGATGCAGTCGCTTAATTTTCAGGGATTTGGTGCAACTCCGTTTATGCAACCAAGAATGGATGCTTCTATGTTAGGTTTGCAACCTGACATTCTGCAAACAATGACAGCACTAGATCCATCGAAACTTGCAAATCAATCCCTTATGCAGTTCCAACATAGTATTCCCAACAGTTCAGCGCCTTTGAGTCAGATTCAGATGTTGCAGCCTTCTCATTCACAGCATAATCTGATACAAGGCTTTTCTGAAAACCACTTAATATCTCAGGCGCAGATGCTTCAGCAGCAATTACAGCGCCGTCAAAACTTCAATGATCAACAGCAATTGCTACAGCCACAGCTTTAGCAGCACCAAGAAGTGAACTCGCAGTTTCAACATCAATAGCAAACTAAGACCATATCTGGTCTCTCTCAGATGGCTTCAGCCACACAGCCCCATCTTTCTCATTTGCAAGTCCTAAGTTCGACTGGTTCCCTGCAAACCTTTTCTGATATACTGGGTAACCATGTCAATGCATCTAGTAATTCTAATATGCAAAGTCTGTTGAGTTCATTTTCCCGTGATGGAGCATCTGCTGTCCTAAACATGCATGAAACTCACCCTCTAGTATCTTCAT
ATGAGGGTATCATCATCTGGGTTCAATCCTCAGCCAGAGGAAGCAGCAGGGGAGAAGAAATGCTTGAATTCAGAGTTGTGGCACGCGTGTGCAGGACCACTAGTTTCACTTCCACCTGTAGGAAGCAGAGTTGTGTATTTTCCTCAAGGGCATAGTGTGCAGGTTGCTGCCTCAACCAACAAGGAAGTAGATGCTCATATCCCTAATTATCCTGGTTTACCGCCTCAACTAATTTGTCAGCTGCACAACTTGACAATGCATGCAGATGTTGAGACTGATGAAGTATATGCTCAAATGACATTGCAGCCACTAAGTCCACAAGAGCAGAAGGATGTGTGCCTGCTACCGGCAGAACTTGGCATCCCGAGTAAACAACCAACCAACTATTTCTGTAAAACTTTGACGGCAAGTGACACCAGTACTCATGGTGGATTCTCTGTCCCTCGCCGAGCCGCAGAAAAAGTTTTTCCCCCTCTTGATTACTCTCAGCAGCCACCCTGTCAAGAGTTGATTGCAAAAGATCTCCATGGGAACGAATGGAAATTACGGCATATTTTTCGCGGACAACCAAAGAGGCATCTATTGACAACCGGATGGAGTGTGTTTGTGAGTGCAAAGAGACTTGTTGCAGGCGATGCAGTCATCTTTATCTGGAACGAAAACAATCAATTGCTTTTGGGGATTCGACGTGCTAATCGTCCTCAAACTCTCATGCCTTCTTCAGTCTTGTCAAGTGATAGCATGCACATTGGTCTCCTGGCTGCAGCAGCTCATGCAACTGCAACTAATACTCGCTTTACAATATTTTATAATCCAAGGGCCAGCCCATCAGAGTTTGTCATACCTCTTGCCAAGTATGCTAAAGCAGTGTATCATACTCGAATCTCTGTTGGTATGAGGTTCCGGATGCTGTTTGAAACAGAAGAATCAAGTGTTCGTAGGTATATGGGCACAATTACTGGCATCAGTGATCTAGATCCTGTTTGTTGGCCAAATTCACACTGGCGGTCTGTGAAGGTTGGATGGGATGAATCTACTGCTGGAGAAAGGCAGCCCAGAGTTTCTCTATGGGAAATTGAACCTCTGACAACATTTCCTATGTATCCTTCTCCTTTCTCCCTTAGGCTAAAGCGGCCTTGGCCATCTGGACTACCTTCTCTCCCTGGTTTTCCAAATGTTGGTTTGACTATGAATTCTCCACTCTCATGGCTACGTGGTGACATGGGAGATCAAGGGATGCAGTCGCTTAATTTTCAGGGATTTGGTGCAACTCCGTTTATGCAACCAAGAATGGATGCTTCTATGTTAGGTTTGCAACCTGACATTCTGCAAACAATGACAGCACTAGATCCATCGAAACTTGCAAATCAATCCCTTATGCAGTTCCAACATAGTATTCCCAACAGTTCAGCGCCTTTGAGTCAGATTCAGATGTTGCAGCCTTCTCATTCACAGCATAATCTGATACAAGGCTTTTCTGAAAACCACTTAATATCTCAGGCGCAGATGCTTCAGCAGCAATTACAGCGCCGTCAAAACTTCAATGATCAACAGCAATTGCTACAGCCACAGCTTTAGCAGCACCAAGAAGTGAACTCGCAGTTTCAACATCAATAGCAAACTAAGACCATATCTGGTCTCTCTCAGATGGCTTCAGCCACACAGCCCCATCTTTCTCATTTGCAAGTCCTAAGTTCGACTGGTTCCCTGCAAACCTTTTCTGATATACTGGGTAACCATGTCAATGCATCTAGTAATTCTAATATGCAAAGTCTGTTGAGTTCATTTTCCCGTGATGGAGCATCTGCTGTCCTAAACATGCATGAAACTCACCCTCTAGTATCTTCAT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g043620.2.1 | SL2.50ch07:57561551..57566695 | 526 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g043620.2 | SL2.50ch07:57561281..57566695 | 5,415 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g043620.2.1.1 | SL2.50ch07:57566653..57566695 | 43 | - | 2 |
| exon | exon:Solyc07g043620.2.1.10 | SL2.50ch07:57562360..57562435 | 76 | - | n/a |
| exon | exon:Solyc07g043620.2.1.11 | SL2.50ch07:57562060..57562207 | 148 | - | 2 |
| exon | exon:Solyc07g043620.2.1.12 | SL2.50ch07:57561281..57561964 | 684 | - | n/a |
| exon | exon:Solyc07g043620.2.1.2 | SL2.50ch07:57566438..57566556 | 119 | - | n/a |
| exon | exon:Solyc07g043620.2.1.3 | SL2.50ch07:57566062..57566160 | 99 | - | n/a |
| exon | exon:Solyc07g043620.2.1.4 | SL2.50ch07:57565927..57565983 | 57 | - | n/a |
| exon | exon:Solyc07g043620.2.1.5 | SL2.50ch07:57565698..57565856 | 159 | - | n/a |
| exon | exon:Solyc07g043620.2.1.6 | SL2.50ch07:57565451..57565535 | 85 | - | 2 |
| exon | exon:Solyc07g043620.2.1.7 | SL2.50ch07:57564439..57564529 | 91 | - | 1 |
| exon | exon:Solyc07g043620.2.1.8 | SL2.50ch07:57563851..57564015 | 165 | - | 1 |
| exon | exon:Solyc07g043620.2.1.9 | SL2.50ch07:57563654..57563776 | 123 | - | 1 |
| intron | intron:Solyc07g043620.2.1.10 | SL2.50ch07:57562436..57563653 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.11 | SL2.50ch07:57562208..57562359 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.12 | SL2.50ch07:57561965..57562059 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.2 | SL2.50ch07:57566557..57566652 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.3 | SL2.50ch07:57566161..57566437 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.4 | SL2.50ch07:57565984..57566061 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.5 | SL2.50ch07:57565857..57565926 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.6 | SL2.50ch07:57565536..57565697 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.7 | SL2.50ch07:57564530..57565450 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.8 | SL2.50ch07:57564016..57564438 | n/a | - | n/a |
| intron | intron:Solyc07g043620.2.1.9 | SL2.50ch07:57563777..57563850 | n/a | - | n/a |
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