Solanum lycopersicum mRNA Solyc07g045480.2.1

mRNA details  
Name
Solyc07g045480.2.1
Type
mRNA
Length
4,079
Organism
Solanum lycopersicum
Description
Phytochrome F
Location(s)
SL2.50ch07:58611076..58621563
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005515
  • GO:0016020
  • GO:0018298
  • GO:0005524
  • GO:0007165
  • GO:0006355
  • GO:0018106
  • GO:0045449
Length
10488
Nb exon
4
Sifter term
  • GO:0005515
  • GO:0004673
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g045480.2.1 Phytochrome F

ATATGCTTAAAGACTCTATTTTTAGCTGACTATTTTTCTTGATTTGGCTGAATGATTGACAATCAAGAAGCATAAGTTGAAGAATTAGAGCTTTTGATGCTTGTTCACATGGAGGAATCTTGGATTGGTACAAGGTAGTTCAAGTGGGTATCAACTTTTACCTTTTATTCTTGTTGAATTTGGTGGATTCTTGCTGTAACTTTTCTTTTCTTTATCACCTTATTTTGGTACTATTTTTATTCTAAATAAAAGGTGAGACCTTTTGTCTGGTCTTCAATTTTTTGTTGTTTCATTTCAGATTCTTGATTCTTCTAGGCTTTTACTAATAACATATGGGAGTTTTTTCCATCCCCAATTTTGGTTAAGAATCTATACAAAAGATAGCTAGAGAAACTGAAATTCTGAGGATAGAGAGAGATGTCTTCTAGTTCTACAACAAACAAGACGAATTGCTCAAGGGGCAGTTCAGCTAGATCTAGGCGTAGTGCTAGAGTTATTGCTCAGACTCCAGTTGATGCAAAGCTTCATGTGGAGTTTGAGGAGTCTGAGCAACAATTTGATTACTCTAGTTCAGTTAACTTGTCTAATTCCACTAGCAATGTTCCATCTTCAACTGTATCTGATTATCTCCAGAAAATGCAAAGGGGAAGTCTAATTCAGCCGTTTGGATGCATGATTGCTATTGATGCGCAAAACTTTGCTGTCATAGCCTATAGCGAAAATGCACCAGAAATGTTGGACTTGACACCTCATGCAGTTCCAAGCATCGAACAGCAAGAGGCTCTGACATTTGGAACAGATGTCAGGAAACTTTTTCGATCTTCAGGTGCTTCTGCCCTTGAAAAAGCAGTCAGCTTTGGAGAACTTAGTTTGCTAAATCCTATTTTGGTTCATTGTAAAAACTCAGGCAAGCCTTTCTATGCGATTCTGCACCGCATTGAGGTTGGATTAGTAATAGATTTGGAGCCTGTGGATCCACACGAGGTCCCTGTAACTACAGCAGGAGCTATAAAATCTTATAAGCTAGCAGCTAAAGCCATTCGGAAATTGCAATCTCTACCAAGCGGGGATATATCATTGTTATGTGATGTGTTAGTTAGAGAAGTGAGTCATTTGACTGGCTATGATCGTGTTATGGTTTATAAATTCCACGAGGATGAACACGGGGAAGTAGTTGCTGAATGTCGTACGCCTGAACTAGAACCTTATCTTGGCTTGCATTACCCTGCTACAGATATACCACAAGCTTCAAGATTTCTCTTCATGAAGAATAAGGTTAGGATGATATGTGATTGCTTAGCTCCACCAATTAGGGTGATTCAAGATCCAAGATTGGCTCAGTCGCTGAGCCTTGGTGGATCCACATTAAGAGCTCCACATGGCTGTCATGCACAATACATGACCAATATGGGTACTGTTGCATCTATGGCGATGTCTGTGATGATTAATGAGCAAGATGATGAGCTGGATAGTGACCAGCAAGTGGGAAGAAAACTGTGGGGTTTGGTAGTTTGCCATCACACTTGCCCTAGATTTCTTTCTTTTCCTTTGAGGTACGCGTCTGAGTTCTTGCTTCAAGTTTTCAGTGTTCAGGTCAATAAAGAAGTGGAAATGGCAGCTCAACTTAAGGAAAAGCAGATACTGCAAATTCAAACTGTTCTATGTGACATGCTTCTAAGAGATGCTCCCATGGGGATTGTTACTCAGTCTCCTAATGTTATGGACCTTGTAAAGTGTGACGGGGCTGCACTTTATTATAGGAACAAGCTTTGGTTGCATGGTGTTACCCCTGCGGAGTCCCAAATCAGAGATATAGCTGAATGGCTCAATGAATCTCATGGTGATAGTACAGGTCTGAACACTGATAGCCTCATGGAAGCTGGCTTCCCAGGTGCTTCTGTGCTCGGTGATGCGGTATGTGGAATGGCTGCTGTAAAAATAACTTCAAAAGATTTCCTCTTCTGGTTCCGTTCCCACACGGCTAAAGAAATCAAGTGGGGTGGTGCAAAACATCTTCCTGGAGACAAGGATGACGGAAGAAAAATGCACCCAAGGTCATCATTTAAAGCCTTTCTGGAGGTTGTTAAGCGGCGGAGCCTGCCTTGGGAAGATGTGGAAATGGATGCCATCCATTCCCTGCAGCTGATATTGCGAGGATCTTTGCAAGATGAGGCTGCTGATTGTTCTAAAATGATTGTGAATGTCCCTGCTGTAGATACCATTATAGATAGAGTGGATACACTTCATATTAACGATATGGTTCGTCTCGTTGAAACAGCATCAATGCCTGTTTTGGCTGTTGATACTTCAGGCCGTATCAATGGATGGAACTCTAAAGTTTCTGAACTAACTGGATTGCCGGTAGAGAATGTTATAGGTGTACCTTTGGTTGATTTGGTTATTGGTGGTACAACAAACACAATTAAACGTGTTCTCTCCCTAGCTTTGCAAGGCAAGGAGGAGAAAAATGTGGAAATCAAACTTAGAACACTTGGTCCTCAAGAAAAGGTCGGGTCAATTTCAATAGTGGTTAATGCCTGCTGTAGTCGAGATTTCAAACAAAACATAGTTGGAGTTTGCTTTACTGGAAAAGATGTTACTGGGCTAAAGCTGATTAAGGACAAATATAGTCGCGTTCAAGGTGATTATGTTGGAATTATCCATAGTCCATCTCCTTTAATTCCTCCAATTTTTGTGATGGATGAGCAGGGAAGATGTGTGGAATGGAATGATGCTATGCACAAGTTGACTGGGTCGAAGAGGGAGGAGGTCATTGATCAAATGCTTCTTGGTGAAGTTTTCACAGTCAATAGCTTCGGTTGCAGGGTTAAAGATCAAGACACATTAACCCAGCTCACGATATTATTGAATAGAGTAATTGCTGGTGGGGAAGGTGAGAAATTGTTTTTTGGGTTATTTAATAAACAGGATAAGTATATTGAAGCCTTAATCTCTGCAAATAAAAAAGTTGATGACGATGGTCGAGTAACTGGGGTCTTGTGCTTCCTGCATGTTCCTAGTCCAGAACTTCAATATGCAATGCACGTACAAAAGCTGTCAGAACAAGCTGCTAAAAATAGTCTTAAAAAGTTGGCTTATGTTCGTCTTGAACTAAAAAACCCTTTAAATGGGATAAACTGCATACAGAATCTGCTGAAATCTTCTGATTTGAGCAAGGATCAAAGGCAATTGCTGAAGACAAGCACAATGTGTCAAAAACAACTAGCCAAGATCATTGACGACACTGATATTGAGAGTATTGAGGAATGCTATACAGAAATGAACTCTTGTGAGTTCAATCTTGGAGAAGTTGTTACAGTGGTCATTAACCAAGTTATGATTCTTAGTCAGGAGCGTAAGGTTCAGGTCACATGGGACTCGCCTGTCGAAGTATCACAGTTGTACCTGATTGGTGACAATTTGAGGCTTCAACAAGTCCTTTCTGACTTTTTGACCACAGCTATCCTCTTTACTCCCTTTGAAGACTCCTCTGTGCATTTCAGAGTAATTCCAAGGAAGGAACGTATAGGGACGAAGATGTACATCATGCATCTTGAATTTCGGATCACTCATCCATCCCCAGGGATACCTGACGATTTAATTCAACATATGTTCCACTACAGTCGGAGCATATCAAGGGAAGGTTTTGGCCTATACATCAGCCAGAAACTTGTTAAAATCATGGATGGTACCGTCCAGTATCTTCGCGAGGCTGACAGATCCTCATTCATTATATTAGTTGAATTTCCACTGATGGAGAAGAAGAACAACTAATAATTCCAGACAAAAGTGTTCCTGACTATCCTGCTGCAGACAACACGTTTTTACATAAATTTTTTTTTTAGACAGGTGGAGTTCTCTAGTACTTCACTTACCATTTCTAATGGCTCTTCATAGTTTACCTAGGCTTATGCAAATGGAGTTCGCTAGAACTTAGCGAAGAATCTCCACTGCTGATATCCTTGCTCCACCATAGGCATGCATAGTCAAGATTCTGGAAAAGGTTACTTTCAGAGAATCAGCTTCTCGACCAGCCAACTGGCGTTGTTATTTGAATAGATTGTATGTTTACCCATTGG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g045480.2.1SL2.50ch07:58611492..586212581,119+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g045480.2SL2.50ch07:58611076..5862156310,488+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g045480.2.1.1SL2.50ch07:58611076..586135272,452+n/a
exonexon:Solyc07g045480.2.1.2SL2.50ch07:58614294..58615110817+n/a
exonexon:Solyc07g045480.2.1.3SL2.50ch07:58616432..58616725294+2
exonexon:Solyc07g045480.2.1.4SL2.50ch07:58621048..58621563516+1
intronintron:Solyc07g045480.2.1.1SL2.50ch07:58613528..58614293n/a+n/a
intronintron:Solyc07g045480.2.1.2SL2.50ch07:58615111..58616431n/a+n/a
intronintron:Solyc07g045480.2.1.3SL2.50ch07:58616726..58621047n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17879679%2Fdetails feature 17879679
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