Solanum lycopersicum mRNA Solyc07g048120.2.1

mRNA details  
Name
Solyc07g048120.2.1
Type
mRNA
Length
2,142
Organism
Solanum lycopersicum
Description
Ubiquitin fusion degradation protein 1 (AHRD V1 ***- C5FJE2_NANOT); contains Interpro domain(s) IPR004854 Ubiquitin fusion degradation protein UFD1
Location(s)
SL2.50ch07:59313880..59321352
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0006511
Length
7473
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g048120.2.1 Ubiquitin fusion degradation protein 1 (AHRD V1 ***- C5FJE2_NANOT); contains Interpro domain(s) IPR004854 Ubiquitin fusion degradation protein UFD1

GCCTTCTCCATCAAGAAATCGAAAATCAATCGAAAGAGTTTCAGATATATATATATATATATATATATATATATACATGTATAATCCAACCTTGGACAGATCATTCGTTCAATATATCTGAAATACGTAATCCATCGCATTGCAATAGAAGAGGAGAAAAGAGAATTTGTTTGGAAGTTTTGTAGAGCGAGAAGAATGGATTTTGAACTGAGAAGAGCGAGAGAGAAGCTAGAGCAAGAGCAGAGGGAGAGGAAACTCAAGGCTAAATTGAAATTGGACAGAGAGAAGAAAGCAAAACAAGAAGCTATTCGTCAACGTGAAGCAATTGAAGCTGTTCAGCGTGCTCGCCGACTTGATGCTGCTGAAGCCCAAGCTAAGGCAACCCAGCAAATTGAAGAAGAACTGCTAGCTGGACGAGGAGTTGCATTCTCTCGTGTTTTGGAAGCTGTACCCTATGAGGGTGCTGGAGATAAAATTAAATTGCCACCATCTTGCTTCACTGAATTGTCTGATCAGGGTGCCTTTGACAAGGGACCTCTACACTTCAGGTTGTCTGTCGTTCACCAATCCTCTCTTTCGGACTTGAAGGATGCAGAGCAGAATAAGCGGACAACGCATGCTGGAGTCCTGGAGTTCACTGCAGATGATGGTGTTGTAGGGCTTCCTTCCCATATATGGAGTAACTTATATCCTGCAGTCTCGCCAATGGTTCCCATGGTTGAGGTGTGTTATGTCTGGCTCCAAAAAGGAACTTATGCAAAACTTCAGCCAGTTGAAGCAGGATTTTCTGATATCCCTAATCACAAGGCAGTTCTTGAAACAAGTCTTCGTCAGCATGCGACGCTTTCAGAAGGCGATGTACTTACTGTTAATCATGGTGTTCTGACATATCATTTACGTGTTCTTGAACTAAAACCTTCTTCGAGTGTGTCTGTTCTAGAAACAGATATAGAGGTTGATGTAATCGGTGCTGATCCAACTGCTGAGAGCACAAGTCAGCCTGTATTGCAACCTCTCGAATTGGGCAAGTTAGATTCTGGGGTGGTTGCAGAAGGAAGCTATGTATATTACAAGTTCCAAATAGGCGATGATGTCTGGGGAAAAATATCTTCAGGAGATGCAGAAGTTGAGGTAAAAATAGAATCAGAGAACCAAGATGGGGATACTGACCTCTATGTTTCCCGACACCCATTACTATTTCCTACACAGCACCAGCATGGTTGGTCATCTCATGACATCGGTTCAAAAGCTTTGGTCCTTAACTCCAGGGATCTCGGCCTTGGACCTGGTACTTACAGTATTGGCATCTATGGTTTCAAGGGCACAACCAAGTACAAGGTGTCAGTTAGCATACGAGACAAATCTAATTTAAAGATTGGACAGCAAGCCGTATCTTCCACATTGTCTGCTGATGGAGATACAGTAGAATGCCAAAACTGTAAACATTACATACCTTCCAGGAGTATAGCACTACATGAAGCTTACTGCAGGAGGCACAATATCATCTGTCAGCATACCGGTTGTGGGGTTGTTCTAAGGAGGGATGAGGTCGAGAACCATGTCCATTGTGAAGAATGTGGGCTAGCATTTCAGAAAGAGGAAATTGAGAAGCACAAGAAAGTATTTCACGTCCCACTGAATTGCCCTTGTGGAATAGTCCTTGAAAAAGAAAAGATGGTTCAACATCAATCTGTGGAGTGTCCCTTGAGACTTGTAACATGCCGGTTTTGTGGAGACATGGTCCAAGCAGGGACTTCAGCAGCAGATGTGAGGGATCGCTTAAGAGGACTTACACAGCACGAGAGTGTTTGTGGATCAAGAACCGCCCCTTGTGATTCATGTGGGCGTTCAGTTATGTTGAAGGATATGGACATACACCAAGTTGCAGTCCACCAGAAAAATTGATCATGAGTAAATCTTTTATTTCTTCTCTGGTGACTTTGGATATAAAATGCTGGTTGAACTGTAAAAACCGACTGTTGATTCATGTATTCATGCAGTTGTATATTTTCGTCTTTATTTTTCATTCTCAACCACTTTAAGGGTTGCAAGGGGAGGGGTGGATTGATGATTTCTAGCTCCCTTTGCTGTGACTTTGAAAATATTATCGATTGTCATCAATGCTTAGTACCTTGTATGTAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g048120.2.1SL2.50ch07:59314074..59321115570+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g048120.2SL2.50ch07:59313880..593213527,473+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g048120.2.1.1SL2.50ch07:59313880..59314257378+n/a
exonexon:Solyc07g048120.2.1.2SL2.50ch07:59319512..593208101,299+n/a
exonexon:Solyc07g048120.2.1.3SL2.50ch07:59320888..59321352465+n/a
intronintron:Solyc07g048120.2.1.1SL2.50ch07:59314258..59319511n/a+n/a
intronintron:Solyc07g048120.2.1.2SL2.50ch07:59320811..59320887n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17880246%2Fdetails feature 17880246
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