Solanum lycopersicum mRNA Solyc07g049180.2.1

mRNA details  
Name
Solyc07g049180.2.1
Type
mRNA
Length
4,920
Organism
Solanum lycopersicum
Description
Receptor-like protein kinase At5g59670 (AHRD V1 *-** RLK7_ARATH); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch07:59437488..59447380
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0016998
Length
9893
Nb exon
12
Sifter term
  • GO:0019199
  • GO:0005057
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g049180.2.1 Receptor-like protein kinase At5g59670 (AHRD V1 *-** RLK7_ARATH); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

TGTGAATTTGAGTGTTGTAGTGAATTGTTCTTGTGGAGATAGAGATGTATCTGAAGATTTTGGGCTTTTTGTAACGTATCCTTTGAGATCGGAGGAGAATTTGACGTATGTGACGGCGACAATGAATGTGAGCGCTGAGTTAATACGAAGGTATAATTCAGATATGGATGCAAAATTCCGTGCCGGAGAAGGGATCATTTATATTCCGGGAAGAGGTTAGTGTTCATGCTCTTTTGTTATGCGTTTGCTTTATTTTCTGGATATAAATGTGCTTTTTAACTTTTAGTTGTATCGTTATATTCGTATTATTTTAAAAATGTATAATTAAATATTAAAATTTATATAAAATTAAATAAATAATTATGCTAATTTCAAGTGATATAATATGCATCATACACAAACTTATCATTTTAGATGTAGATTATTCGCACTGGTGAGGGCTTATGGTCAATTATAGGTGCTAAACAAGACTTTAGAGACCATGGTAGGTGCTATTGTTATGATAGTCAACAAGATTGGATGAGTTTTCAAAGGCGGAATAAGCATCAGGACGAGTAGTGGTAGAATTAGAATTTTTAATAACGATGTTTAAAATTTAAACAAAGTAAATATATAAATTAATTGAAGAGATTCAATATTTATTATATATACATAAAAAATAATTTTAGTCATATATAAATAATAAGATTTTATATCAAAAGAGGTTCATGAAAGGAGTTCGAGCGAACCCTTGACATACTGGTGGTTCCAAATTTGAGGACGAGGCATAACAAAAACCCACTGAGGCATTGTGGGGTGGGGGGAGAGTGAATAGTAATGGTAATGGTGATGATAGTAAAAGACTTATAAGGCATAAATCTTGATATTTGGGGTGTTCATCTAAGCTTGGGCGGCGTAAATTTCTTATGGGGCGCAAGTATAGGATGTCAAATTGATAGATTGGGTTGAAATGAGAGATATTAAAATGGAATTTAGAAATCATGTTGGGTTATAATCTCTCCAAATTTATTTTGGATTTAAATGACTTAGGCTTAAATGTGCTAAAAACGAGTTCGGTCATGACTTTCTCAATTTGATCCGCTTAATCTTAATAATTTTAGAAAAATTAATTAAATACACAATTTTATTTTTGAAAAAACTACATAAATTGGTCATAAATCAAAAATAATTATAAGGTCATACTCAAATTCAAAGTAATTCTTGAAATATTCATTCTCTCATAAATAATTACAACTCATATTTTCATTCATTAAAAATTAAGATTGATAATTTTTACTTAACTGAATCATATATTGTATTGATATCATTAGTACTGATAATTTGGCTTAACTGATTTTGAATTGATATCATTAGACATTAAGATTTAAAATCATTTTTCAAACGAATTAGCTAAAAAAAATTTCTTCAAATGCACTTATTTGAAAAGCTATTTTAAAAAAAGTTTTAATAGCAATGCCAAACAAACTCAAATTGAAATAAGTACCAGGAAATCTAAGAAAAACATTTTAATATATATTTTTAAATTTTTTTATCTCCTTTTATCTCATTCTCCTCACGTTTCTAGTTCGGTCGACCTACTCAAAGCTTGTTTTTTATTTTCCTAATTTTTCTCTACACAATATTCAATTGAAATGGTTGGAGTTGTAGCATACAAGCTCTTTTTGCCTAAAATTTAGATTTAGAATCCATTGTTATTCATATTTCTTTAATATGATCCTAGTTATCTATAAAAGGGAAAAAACAAATATATTTGAAGTGACGTAAATAAAATATATATACTCTTTGTTATATTTTTGAGATATTGATGACTCTATCGTTTAAAAAGAACTAGAGCATGTATATTCTTCACTTTAACAAAAGACTATATAGGAACACGTGACACAATCTTATTTGTCGATCCGGTATTTAATAAATGTCGGACCAATGAATAAGATTATGATACATACATGTCTATTAGTATAAAGGCAATATATGCGAGTCCGGAGCCAAAGTAGAAAAAAAATTGTCAAAAATTTTAAAAGGGCATATCAAAAAAAAATTTAACCAAAAGGACAAAATCATTTTTTAGAATGATTTTATTTTTTAATATCGCTACGTGCAGCATTTTAAAAAGAAAAAAAGCTAAATTCTTTTTACACTATCTACTTGTGCAATTTTTTGTACAACAATACTTCACACCATTGAAATTACTTGACATCAATTTTTTAAACCTTCTTTTTTTGTTGTTGGTTCAAAATGAAATTTCAAAGATTAAAAAAAAAGTCAAAAACTACAGTAATACTACTTCGTTGAATTTGTCTTTTGTCAAATCAGAATCACCAAGGGCTTCGATTTAATTTACTTTCGATCTAACGGTTGAGAATTGCCACCATTTAAAAGGCCGCCATGAGAGACCAGAAGAAGATTTCAAAAGCTGTAAGAACACGGCTTTCCTTAATTCCCTGACAAGTGCGCTGCCGACACAATTCTATTTCATTGTTTTCCCCAAAGTATTAAATTATCTGAACAATAATCATTCATTATTTTACTAATTTTCAATCCAACTTTATCAATAACCCACTCAGTCAACGCTTACTCCTCCAAAACCCAGCTCAAATTTCCCAGAAAAATTCGTTCTTGCATCAATTTCCTTCACACCCATTTCATAATTTCCAGAAAAATACATTTTTGTATCAATTTCATAATACCCATTTCAGGAAATCCATAAAAATACGTTCTTGAATCAATTTCCCACATACCCATTTCAGAAATTTTCATTCTTTATTCATGAAACATGTTTGAATCCAGGCCAAGAAGTGTTTTGAGCTTAGGGGTTTTCGTTATACTAGTTTACTTATCCTCTGTTCCATTACCAGTTAACTCCCAATGTAACAGAGGCTGCGATTTAGCTTTAGCTTCATTCTATGTCTGGCGAGGTTCAAATCTCACTTTAATCTCAGAGATGTTCTCCACCAGTATAGCAGATATCGTTTCTTACAACAACAGGGACAATATCCCTAATCAAGATAGTGTAATCGCCGGGACAAGAATTAACATACCTTTCCGTTGTGATTGCTTGAACGACGGGGAGGTATTGGGTCATGCTTTCCCGTATAGGGTTAAATCCGGTGATACTTATGATCTTGTGGCGAGGAACTACTCTGATTTGACGACTGCACAGTGGATGATGAAGTTTAATAGTTATCCTGAGAATAATATTCCGAATACTGTGAATTTAAGTGTTGTAGTGAATTGTTCTTGTGGGAATAGTGACGTTTCGAAGGATTTTGGGTTGTTTGTGACGTACCCTGTGCGGGCGGAGGATAACTTGACGTCAGTGGCTTCAGCAGCCAATGTGAGTGAAGATATAATCAGAAGGTATAATCCCGCGGCCGTGTCCATACTAGATATAGGGCAAGGAATCATCTATATACCGGGAAGAGATAGAAATGGGAACTTTCCACCGCTGCCAACAAGCACAGATGGTTTGTCTGGTGGCGCTAAAGCTGGGATATCTATAGGAGCAATAGGAGTAGTCTTGCTGTTGGCTGGTTTGGTTTATGTAGGATGTTATAGGAACAAAACACGAAAGATTTCGCTGCTCAGATCGGAAGACCACCTCCATCAGTATGGTCATGGCCCAGAAGGCAGTACGACAGTTAAAGCTGCTGATTCCGGTCGCCTGGCTGATGGCAATTCTCCAGTGCTTTCAGGCATAACTGTGGATAAATCTGTTGAGTTCACTTATGAGGAGCTTGCTACTGCAACTAATGACTTCAGCATTGCTAACAAAATCGGACAAGGTGGTTTTGGTGCGGTTTATTATGCTGAGCTCAGAGGCGAGAAAGCAGCCATCAAGAAAATGGACATGGAGGCTACCAGGGAGTTTCTAGCTGAATTGAAGGTCTTGACAAATGTTCATCACCTGAACCTGGTGCGCTTGATAGGTTATTGTGTTGAAGGTTCCCTCTTTCTTGTATATGAATACGTTGAGAATGGCCACATAGGCCAACATCTACGTGGTACAGGAAGGGACCCATTGCCATGGTCTAAGAGGGTTCAAATTGCTCTAGATTCAGCTAGAGGTCTTGAGTACATACATGAACATACTGTACCAGTTTACATCCATCGCGATATTAAAACTGCAAATATTCTGATAGACAAAAACTTCCATGCAAAGGTGGCAGATTTTGGTTTAACGAAACTGACTGAAGTTGGAAGCTCGTCCTTGCAAACACGACTTGTGGGTACATTTGGATACATGCCTCCAGAGTATGCTCAGTATGGTGATGTCTCTCCGAAAGTTGATGTTTATGCTTTTGGTGTTGTCCTATATGAACTAATTTCAGCCAAGGAAGCGATTGTCAAGCCAAATGGTTCTGTAACTGAATCAAAGGGTCTTGTTGCTTTGTTTGAAGAAGTACTTAATCAGCCAGATCCTGATGAAGATCTTCGGCAACTGGTTGACCCAAGACTTGGAGATGACTATCCCCTTGATTCAGTCCGGAAGATGGCACAACTTGCCAAAGCTTGCACCCATGAAAATCCCCTAATAAGACCAAGTATGAGATCAATAGTGGTTGCGTTGATGACCCTCTCTTCGTCAACAGAAGATTGGGATGTTGGATCTTTCTATGGAAATCAAGGCATGATAAACCTCATGTCTGGAAGGTAGTAAACCAAAATATTGCACCCACGCGCAATTAACATTTCATTCAGATCCATGTTGTTTAAGCATTGGATATGTGTACTAGTGCATTTTTACTTGTATAGTACTTGCTTGAATAGTGTAAGAAAAGCATAGAAAGATGTATTTCAATTGTAACATTTAGCACATACTTTATGAGTTGGAAATGGAACATTTCCTCACGAGGAAATACATGGTTTCTTTGTTGTCTGATGTCTGATCAGAGGCAAGAACTAGAATTTTCAGTTTATGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g049180.2.1SL2.50ch07:59437753..59444607627-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g049180.2SL2.50ch07:59437488..594473809,893-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g049180.2.1.1SL2.50ch07:59443959..594473803,422-2
exonexon:Solyc07g049180.2.1.10SL2.50ch07:59438278..59438416139-n/a
exonexon:Solyc07g049180.2.1.11SL2.50ch07:59438014..5943811299-n/a
exonexon:Solyc07g049180.2.1.12SL2.50ch07:59437488..59437918431-n/a
exonexon:Solyc07g049180.2.1.2SL2.50ch07:59441702..5944173534-1
exonexon:Solyc07g049180.2.1.3SL2.50ch07:59441580..594415878-2
exonexon:Solyc07g049180.2.1.4SL2.50ch07:59441302..59441454153-2
exonexon:Solyc07g049180.2.1.5SL2.50ch07:59440873..59441078206-n/a
exonexon:Solyc07g049180.2.1.6SL2.50ch07:59440369..5944045890-n/a
exonexon:Solyc07g049180.2.1.7SL2.50ch07:59439142..5943923594-2
exonexon:Solyc07g049180.2.1.8SL2.50ch07:59438888..59439039152-n/a
exonexon:Solyc07g049180.2.1.9SL2.50ch07:59438721..5943881292-1
intronintron:Solyc07g049180.2.1.10SL2.50ch07:59438417..59438720n/a-n/a
intronintron:Solyc07g049180.2.1.11SL2.50ch07:59438113..59438277n/a-n/a
intronintron:Solyc07g049180.2.1.12SL2.50ch07:59437919..59438013n/a-n/a
intronintron:Solyc07g049180.2.1.2SL2.50ch07:59441736..59443958n/a-n/a
intronintron:Solyc07g049180.2.1.3SL2.50ch07:59441588..59441701n/a-n/a
intronintron:Solyc07g049180.2.1.4SL2.50ch07:59441455..59441579n/a-n/a
intronintron:Solyc07g049180.2.1.5SL2.50ch07:59441079..59441301n/a-n/a
intronintron:Solyc07g049180.2.1.6SL2.50ch07:59440459..59440872n/a-n/a
intronintron:Solyc07g049180.2.1.7SL2.50ch07:59439236..59440368n/a-n/a
intronintron:Solyc07g049180.2.1.8SL2.50ch07:59439040..59439141n/a-n/a
intronintron:Solyc07g049180.2.1.9SL2.50ch07:59438813..59438887n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17880299%2Fdetails feature 17880299
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