Solanum lycopersicum mRNA Solyc07g054500.2.1
 mRNA details
|
| Name | Type |
Length
2,705
|
Organism |
|
Description
Receptor like kinase, RLK
|
|
Location(s)
SL2.50ch07:62804145..62814869
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005515
- GO:0006468
- Length
- 10725
- Nb exon
- 16
- Sifter term
- GO:0004674
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g054500.2.1 Receptor like kinase, RLK
ATGGGTGGGAAGAGATCTGTGTTAGGGTGCTTGAGTTTGGAGATCTTGGTGGGGATTTTGTTGATTTTTGCTGTTCAGCTTTCAGATGAAACTGACCCTGGAGATGTTGCTGCAATTAATGCCTTACATGCTTCCCTGGGATCACCTTCCCTTCCTGGCTGGGGTGTTAGTGCAGACCCATGTGATGGACAATGGCAAGGGGTCGTATGCGAGGAGACGAATATAATAACCATTCAATTAAATGCTGCTAACTTGGCAGGTGAACTTGGGGATAACTTAGCATCATTTTCTTCTCTCAAAACAATAGATCTGAGTAACAATCACATCGGCGGAACCTTCCCATCCAGTCTGCCAGTTACATTGCAGAATATTTTTCTTTCAGATAATGATTTAACCGGAAGTATCCCCAGTTCTTTATCTTCCCTAAGTCAACTTTCAGCAATGTCTCTCAATGGAAACCAACTGACTGGAGAACTTCCAGATTCCTTTCAAGGCCTTACAGCATTGGTTAATCTTGATCTGTCAAGTAACAGTTTCAGCGGAGCCTTGCCGTCATCAGTAGGAAACTTGTCCTCCCTGACTACTCTACATGTGCAGAATAACCAGCTTTCTGGAACTCTTGATGTTTTACAAGATCTTCCTCTCGCAGATTTGAATGTGGAGAATAACCTGTTTTCTGGGCCCATACCTCAGAAGTTGTTATCTATTCCCAATTTCAAAAACACTGGAAATCCTTTCAACAGTGTCTCTCCTTTGTCTCCACCCAACAGTAGTATCTCTCCTTTGTCTCCACCTACTTCGTTTACGAGACCCCCTCCAGCGCCACCAGGATCACCCTTTTTTAAGCCTCCAACTTCAACACAGACACCACCACCTTCAGAAAGAAAACCTGGACAAAAGGCTGATGGACCATCAGCAACTGCAGAGTCTAGTTCAAAAGGAAGCAAAAAGTCTGTTAAAAGGGTAGTCTGGATATCCATTGCATCAGTTTTTTCATTTATAATATTGGTATTAGCAATCCTGCTCTTTCTGCCAAGATGCTTTAGGGAAAGGCAAGAGACAAATTGGTCCAGACGGCACGAAATAGCTCCTGACAGGGAGAATCGTAGAGAGAATGGTTTATTGGTCCTACCTGGACATGATGTAGAGAAAGCTCCTCCTCTGGTGAGGCCAAAGGAAGATCAACAACCAAGGAGACCGACCCGCACTCCCATGCCACAGCAGGAGCAGGAGTTAAATGTGCAAAACCTGAGGGCAGTGCCAAAGAAGGATAGTAGTGAGATAAACCTGAGCAGAATTGATATTGATTCGATGTTGCCACCACCTCCACCCCCACCACCACCTCCGCCACCGCCACCGCCACCACCCTTTCTTCAAGAGAGAGTTATTGTGAAGCCAATTCCACCTGCCGACAATACTGCAATGAAGTTTCCCCACAGGCCACTTCCACTAACTTCTGTGAAATCTTACACAATCGCATCTCTTCAGCAATATACCAACAGCTTTTCTCAAGATAATCTGATAGGATCAGGAATGCTGGGAACTGTGTACAGGGCAGAGCTTCCAAACGGGAAGTTACTTGCTGTCAAGAAGCTGGACAGAAGAATTTCCAATCAACAGAAGGATGATGAGTTTCTTGACCTAGTAAACAATATTGACGGAATTCGTCATGCTAACGTTGTCGAGTTGATGGGCTATTGTGCAGAGCATGGTCAAAGGCTTCTGGTTTATGAGTACTGCAGTAGCGGGACACTACAAGATGCGCTGCACTCTGAGGATGAATTTAAGCAACAACTTTCATGGGATACACGGATCCGGATGGCTCTTGGAGCTGCAAGAGGCTTGGAGTATCTCCATGAGGTCTGTGAGCCACCTATTATCCACAGAAACTTCAAATCTGTCAATCTTCTCCTTGATGAAGAGTTGGCTGTGCATATCTCTGACTGTGGTTTAGCTCCACTGATATCATCAGGTGCCGTGAGCCAGTTGTCAGGACAACTTCTTACCACCTATGGCTATGGTGCCCCAGAATTTGAGTCAGGGATTTACACTTCTCAGAGTGATGTTTACAGTTTTGGTGTGGTGATGCTGGAACTCTTAACGGGCAGAATGTCATATGACCGAACTCGAAGTCGAGGAGAGCAATTCTTGGTTAGATGGGCCATCCCTCAGCTACATGATATTGATGCATTGACAAGAATGGTTGATCCTTCTCTCAAAGGAAAGTACCCACTTAAGTCATTATCACATTTTGCTGACATAATTTCCCGCTGCGTTTTGCCTGAGCCAGAATATAGGCCACAAATGTCAGAAGTGGTTCAAGACCTCATACAAATGATAAGAAGAGAATCTCCCAGTAGATCAGATGAAGAATGATTTGAACCAGACATGTATGCTATAGCAGATTCAGGCATGGAGTAACCAAGACTTCCAAGATTTTTTTACTTTTGCGAAGAACTTAACTCGAGCTGAGATACTTGGAACCAAAGACTTTAAGGCTGTAGATGCAGTTCCCTGCCAGCAAAGCTTCATACCTCCAAGACAAAGGGCTGGCTAGAAACTGCGCGATTTCAAGCAACACAGCTCGGGTTTATCCTGATTCTCAGTACAATTTTTTGCAAATCATTCTAATGTTCAGTTATAGGCCAAACAGAAACCAGAATGCATAAAATGCACTAACCCCATTGTTTTGAGAGCTTATTTAT
ATGGGTGGGAAGAGATCTGTGTTAGGGTGCTTGAGTTTGGAGATCTTGGTGGGGATTTTGTTGATTTTTGCTGTTCAGCTTTCAGATGAAACTGACCCTGGAGATGTTGCTGCAATTAATGCCTTACATGCTTCCCTGGGATCACCTTCCCTTCCTGGCTGGGGTGTTAGTGCAGACCCATGTGATGGACAATGGCAAGGGGTCGTATGCGAGGAGACGAATATAATAACCATTCAATTAAATGCTGCTAACTTGGCAGGTGAACTTGGGGATAACTTAGCATCATTTTCTTCTCTCAAAACAATAGATCTGAGTAACAATCACATCGGCGGAACCTTCCCATCCAGTCTGCCAGTTACATTGCAGAATATTTTTCTTTCAGATAATGATTTAACCGGAAGTATCCCCAGTTCTTTATCTTCCCTAAGTCAACTTTCAGCAATGTCTCTCAATGGAAACCAACTGACTGGAGAACTTCCAGATTCCTTTCAAGGCCTTACAGCATTGGTTAATCTTGATCTGTCAAGTAACAGTTTCAGCGGAGCCTTGCCGTCATCAGTAGGAAACTTGTCCTCCCTGACTACTCTACATGTGCAGAATAACCAGCTTTCTGGAACTCTTGATGTTTTACAAGATCTTCCTCTCGCAGATTTGAATGTGGAGAATAACCTGTTTTCTGGGCCCATACCTCAGAAGTTGTTATCTATTCCCAATTTCAAAAACACTGGAAATCCTTTCAACAGTGTCTCTCCTTTGTCTCCACCCAACAGTAGTATCTCTCCTTTGTCTCCACCTACTTCGTTTACGAGACCCCCTCCAGCGCCACCAGGATCACCCTTTTTTAAGCCTCCAACTTCAACACAGACACCACCACCTTCAGAAAGAAAACCTGGACAAAAGGCTGATGGACCATCAGCAACTGCAGAGTCTAGTTCAAAAGGAAGCAAAAAGTCTGTTAAAAGGGTAGTCTGGATATCCATTGCATCAGTTTTTTCATTTATAATATTGGTATTAGCAATCCTGCTCTTTCTGCCAAGATGCTTTAGGGAAAGGCAAGAGACAAATTGGTCCAGACGGCACGAAATAGCTCCTGACAGGGAGAATCGTAGAGAGAATGGTTTATTGGTCCTACCTGGACATGATGTAGAGAAAGCTCCTCCTCTGGTGAGGCCAAAGGAAGATCAACAACCAAGGAGACCGACCCGCACTCCCATGCCACAGCAGGAGCAGGAGTTAAATGTGCAAAACCTGAGGGCAGTGCCAAAGAAGGATAGTAGTGAGATAAACCTGAGCAGAATTGATATTGATTCGATGTTGCCACCACCTCCACCCCCACCACCACCTCCGCCACCGCCACCGCCACCACCCTTTCTTCAAGAGAGAGTTATTGTGAAGCCAATTCCACCTGCCGACAATACTGCAATGAAGTTTCCCCACAGGCCACTTCCACTAACTTCTGTGAAATCTTACACAATCGCATCTCTTCAGCAATATACCAACAGCTTTTCTCAAGATAATCTGATAGGATCAGGAATGCTGGGAACTGTGTACAGGGCAGAGCTTCCAAACGGGAAGTTACTTGCTGTCAAGAAGCTGGACAGAAGAATTTCCAATCAACAGAAGGATGATGAGTTTCTTGACCTAGTAAACAATATTGACGGAATTCGTCATGCTAACGTTGTCGAGTTGATGGGCTATTGTGCAGAGCATGGTCAAAGGCTTCTGGTTTATGAGTACTGCAGTAGCGGGACACTACAAGATGCGCTGCACTCTGAGGATGAATTTAAGCAACAACTTTCATGGGATACACGGATCCGGATGGCTCTTGGAGCTGCAAGAGGCTTGGAGTATCTCCATGAGGTCTGTGAGCCACCTATTATCCACAGAAACTTCAAATCTGTCAATCTTCTCCTTGATGAAGAGTTGGCTGTGCATATCTCTGACTGTGGTTTAGCTCCACTGATATCATCAGGTGCCGTGAGCCAGTTGTCAGGACAACTTCTTACCACCTATGGCTATGGTGCCCCAGAATTTGAGTCAGGGATTTACACTTCTCAGAGTGATGTTTACAGTTTTGGTGTGGTGATGCTGGAACTCTTAACGGGCAGAATGTCATATGACCGAACTCGAAGTCGAGGAGAGCAATTCTTGGTTAGATGGGCCATCCCTCAGCTACATGATATTGATGCATTGACAAGAATGGTTGATCCTTCTCTCAAAGGAAAGTACCCACTTAAGTCATTATCACATTTTGCTGACATAATTTCCCGCTGCGTTTTGCCTGAGCCAGAATATAGGCCACAAATGTCAGAAGTGGTTCAAGACCTCATACAAATGATAAGAAGAGAATCTCCCAGTAGATCAGATGAAGAATGATTTGAACCAGACATGTATGCTATAGCAGATTCAGGCATGGAGTAACCAAGACTTCCAAGATTTTTTTACTTTTGCGAAGAACTTAACTCGAGCTGAGATACTTGGAACCAAAGACTTTAAGGCTGTAGATGCAGTTCCCTGCCAGCAAAGCTTCATACCTCCAAGACAAAGGGCTGGCTAGAAACTGCGCGATTTCAAGCAACACAGCTCGGGTTTATCCTGATTCTCAGTACAATTTTTTGCAAATCATTCTAATGTTCAGTTATAGGCCAAACAGAAACCAGAATGCATAAAATGCACTAACCCCATTGTTTTGAGAGCTTATTTAT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g054500.2.1 | SL2.50ch07:62804473..62814869 | 792 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g054500.2 | SL2.50ch07:62804145..62814869 | 10,725 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g054500.2.1.1 | SL2.50ch07:62814764..62814869 | 106 | - | 2 |
| exon | exon:Solyc07g054500.2.1.10 | SL2.50ch07:62810041..62810474 | 434 | - | 2 |
| exon | exon:Solyc07g054500.2.1.11 | SL2.50ch07:62808993..62809414 | 422 | - | n/a |
| exon | exon:Solyc07g054500.2.1.12 | SL2.50ch07:62807977..62808248 | 272 | - | 1 |
| exon | exon:Solyc07g054500.2.1.13 | SL2.50ch07:62807366..62807504 | 139 | - | n/a |
| exon | exon:Solyc07g054500.2.1.14 | SL2.50ch07:62806233..62806369 | 137 | - | 1 |
| exon | exon:Solyc07g054500.2.1.15 | SL2.50ch07:62805994..62806150 | 157 | - | n/a |
| exon | exon:Solyc07g054500.2.1.16 | SL2.50ch07:62804145..62804569 | 425 | - | n/a |
| exon | exon:Solyc07g054500.2.1.2 | SL2.50ch07:62813322..62813448 | 127 | - | 1 |
| exon | exon:Solyc07g054500.2.1.3 | SL2.50ch07:62813169..62813240 | 72 | - | 1 |
| exon | exon:Solyc07g054500.2.1.4 | SL2.50ch07:62812963..62813028 | 66 | - | 1 |
| exon | exon:Solyc07g054500.2.1.5 | SL2.50ch07:62812790..62812861 | 72 | - | 1 |
| exon | exon:Solyc07g054500.2.1.6 | SL2.50ch07:62812633..62812704 | 72 | - | 1 |
| exon | exon:Solyc07g054500.2.1.7 | SL2.50ch07:62812476..62812547 | 72 | - | 1 |
| exon | exon:Solyc07g054500.2.1.8 | SL2.50ch07:62812333..62812398 | 66 | - | 1 |
| exon | exon:Solyc07g054500.2.1.9 | SL2.50ch07:62812171..62812236 | 66 | - | 1 |
| intron | intron:Solyc07g054500.2.1.10 | SL2.50ch07:62810475..62812170 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.11 | SL2.50ch07:62809415..62810040 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.12 | SL2.50ch07:62808249..62808992 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.13 | SL2.50ch07:62807505..62807976 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.14 | SL2.50ch07:62806370..62807365 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.15 | SL2.50ch07:62806151..62806232 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.16 | SL2.50ch07:62804570..62805993 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.2 | SL2.50ch07:62813449..62814763 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.3 | SL2.50ch07:62813241..62813321 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.4 | SL2.50ch07:62813029..62813168 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.5 | SL2.50ch07:62812862..62812962 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.6 | SL2.50ch07:62812705..62812789 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.7 | SL2.50ch07:62812548..62812632 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.8 | SL2.50ch07:62812399..62812475 | n/a | - | n/a |
| intron | intron:Solyc07g054500.2.1.9 | SL2.50ch07:62812237..62812332 | n/a | - | n/a |
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