Solanum lycopersicum mRNA Solyc07g055920.2.1
 mRNA details
|
| Name | Type |
Length
1,184
|
Organism |
|
Description
Agamous MADS-box transcription factor (AHRD V1 **-- B2CDE2_9ASPA); contains Interpro domain(s) IPR002487 Transcription factor, K-box
|
|
Location(s)
SL2.50ch07:63841344..63851220
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- Length
- 9877
- Sifter term
- GO:0005515
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g055920.2.1 Agamous MADS-box transcription factor (AHRD V1 **-- B2CDE2_9ASPA); contains Interpro domain(s) IPR002487 Transcription factor, K-box
ATTTTCTGCAAGCTCTCCTGTTCAAACCTATACAAAATAGGAACAAATTTGAAGAGAAAAAAATAAAAAAAAATCTCTAAGTTTTTTTTTTCTTCTTTTCGATACAAGACGATATGGTTTTTCCTATTAATCAGGAATTACTTGTCGATGAGTCGTCTTCTCAGTTGAGAAAAACAAGTGGAGGAACTGGTGGAGGAGGTAGAGGGAAGATTGAAATTAAAAGGATCGAAAATACGACAAATCGACAAGTTACGTTCTGCAAGCGTAGAAATGGGCTATTGAAAAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAAGTTTCACTAATTGTATTTTCCAGCCGCGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGGGCAACTATTGATAGGTACAAGAAACACCATGCTGATTCCACTAGTACTGGATCTGTTTCTGAAGCTAACACTCAGTACTACCAGCAAGAAGCATCCAAACTGCGACGACAAATTCGAGATATACAGACTTATAACAGGCAAATAGTTGGAGAGGCATTGGGCAGTTTAAGCCCTAGAGACCTCAAGAATTTGGAAGGGAAACTTGAAAAGGCCATTGGTAGAGTCCGTTCCAAAAAGAATGAATTGCTTTTCTCAGAAATAGAGCTCATGCAAAAGAGGGAGATTGAGCTGCAGAACGCCAACATGTATCTACGCATAGCAGAGGTAGAGAGAGCACAAGAGCAAATGAACTTGATGCCTGGAGGCGGAGGCGGAGGCGGAGGCGGAGGAGGAGGAGGATCTGATCATCAATACCATCATCAGCCAAATTACGAAGATGCTCGCAATAACTTCCTGCCTGTAAATCTCCTGGAACCAAATCCTCATTACTCTCGTCGCGACAATGGTGACCAAACTCCTCTCCAGCTTGTCTGATAATCATGGAGCAGGTATTCTGAAATTTGGGGTCAAGGCTCTTCATCTTCAGAAAAATGTGTACTACAATTTTTAACCTATAGTGTTGTAAATCATAATCATAATTATTGCCACTGAGATTTAAACTGTTTATTTTTAAGCAATATTATTCAGTCATCTGTTAATTAAGGAATGAAAAATCTTGTTTGTTATATTATGACTACTTCTATATACTTTTACAGCCTTATATAAATAATATGCTATTGAACTATACATACAACATTCTCT
ATTTTCTGCAAGCTCTCCTGTTCAAACCTATACAAAATAGGAACAAATTTGAAGAGAAAAAAATAAAAAAAAATCTCTAAGTTTTTTTTTTCTTCTTTTCGATACAAGACGATATGGTTTTTCCTATTAATCAGGAATTACTTGTCGATGAGTCGTCTTCTCAGTTGAGAAAAACAAGTGGAGGAACTGGTGGAGGAGGTAGAGGGAAGATTGAAATTAAAAGGATCGAAAATACGACAAATCGACAAGTTACGTTCTGCAAGCGTAGAAATGGGCTATTGAAAAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAAGTTTCACTAATTGTATTTTCCAGCCGCGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGGGCAACTATTGATAGGTACAAGAAACACCATGCTGATTCCACTAGTACTGGATCTGTTTCTGAAGCTAACACTCAGTACTACCAGCAAGAAGCATCCAAACTGCGACGACAAATTCGAGATATACAGACTTATAACAGGCAAATAGTTGGAGAGGCATTGGGCAGTTTAAGCCCTAGAGACCTCAAGAATTTGGAAGGGAAACTTGAAAAGGCCATTGGTAGAGTCCGTTCCAAAAAGAATGAATTGCTTTTCTCAGAAATAGAGCTCATGCAAAAGAGGGAGATTGAGCTGCAGAACGCCAACATGTATCTACGCATAGCAGAGGTAGAGAGAGCACAAGAGCAAATGAACTTGATGCCTGGAGGCGGAGGCGGAGGCGGAGGCGGAGGAGGAGGAGGATCTGATCATCAATACCATCATCAGCCAAATTACGAAGATGCTCGCAATAACTTCCTGCCTGTAAATCTCCTGGAACCAAATCCTCATTACTCTCGTCGCGACAATGGTGACCAAACTCCTCTCCAGCTTGTCTGATAATCATGGAGCAGGTATTCTGAAATTTGGGGTCAAGGCTCTTCATCTTCAGAAAAATGTGTACTACAATTTTTAACCTATAGTGTTGTAAATCATAATCATAATTATTGCCACTGAGATTTAAACTGTTTATTTTTAAGCAATATTATTCAGTCATCTGTTAATTAAGGAATGAAAAATCTTGTTTGTTATATTATGACTACTTCTATATACTTTTACAGCCTTATATAAATAATATGCTATTGAACTATACATACAACATTCTCT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g055920.2.1 | SL2.50ch07:63841669..63850953 | 268 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g055920.2 | SL2.50ch07:63841344..63851220 | 9,877 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g055920.2.1.1 | SL2.50ch07:63841344..63841424 | 81 | + | n/a |
| exon | exon:Solyc07g055920.2.1.2 | SL2.50ch07:63841638..63841932 | 295 | + | n/a |
| exon | exon:Solyc07g055920.2.1.3 | SL2.50ch07:63847262..63847343 | 82 | + | n/a |
| exon | exon:Solyc07g055920.2.1.4 | SL2.50ch07:63847940..63848001 | 62 | + | 1 |
| exon | exon:Solyc07g055920.2.1.5 | SL2.50ch07:63848171..63848270 | 100 | + | n/a |
| exon | exon:Solyc07g055920.2.1.6 | SL2.50ch07:63848368..63848409 | 42 | + | 1 |
| exon | exon:Solyc07g055920.2.1.7 | SL2.50ch07:63848764..63848799 | 36 | + | n/a |
| exon | exon:Solyc07g055920.2.1.8 | SL2.50ch07:63849171..63849385 | 215 | + | n/a |
| exon | exon:Solyc07g055920.2.1.9 | SL2.50ch07:63850950..63851220 | 271 | + | n/a |
| intron | intron:Solyc07g055920.2.1.1 | SL2.50ch07:63841425..63841637 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.2 | SL2.50ch07:63841933..63847261 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.3 | SL2.50ch07:63847344..63847939 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.4 | SL2.50ch07:63848002..63848170 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.5 | SL2.50ch07:63848271..63848367 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.6 | SL2.50ch07:63848410..63848763 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.7 | SL2.50ch07:63848800..63849170 | n/a | + | n/a |
| intron | intron:Solyc07g055920.2.1.8 | SL2.50ch07:63849386..63850949 | n/a | + | n/a |
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