Solanum lycopersicum mRNA Solyc07g056580.2.1

mRNA details  
Name
Solyc07g056580.2.1
Type
mRNA
Length
2,753
Organism
Solanum lycopersicum
Description
Ethylene receptor (AHRD V1 **** Q5QG25_SOLLC); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver region IPR014525 Signal transduction histidine kinase, hybrid-type, ethylene sensor IPR005467 Signal transduction histidine kinase, core
Location(s)
SL2.50ch07:64389287..64395804
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016020
  • GO:0016310
  • GO:0005789
  • GO:0005524
  • GO:0006355
  • GO:0007165
  • GO:0018106
Length
6518
Nb exon
7
Sifter term
GO:0051740
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g056580.2.1 Ethylene receptor (AHRD V1 **** Q5QG25_SOLLC); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver region IPR014525 Signal transduction histidine kinase, hybrid-type, ethylene sensor IPR005467 Signal transduction histidine kinase, core

GAATCAAAACGGTTGGCCATTAATGGAGGATCACTCTTACTTATGCTTTACTGTATTAGTGGTCATTTATCCTCCACCTCTAGCTCCGGCGACCTCGTCGCGTATCTCTTTTTCCGGCGATATTCAGTTTGGTGTTGATAAGATAAGAGTGATTCATTAAGGAGTTTGTTCATCATGGATTGTAACTGCTTCGATCCACTGTTGCCTGCCGATGAGTTGTTAATGAAGTATCAGTACATTTCTGATTTTTTCATTGCAGTTGCTTATTTTTCCATCCCAATCGAACTGGTATACTTTGTCCAGAAATCAGCTGTTTTTCCGTATCGATGGGTGCTTGTGCAGTTTGGTGCTTTCATAGTTCTTTGTGGAGCAACACACCTTATCAATTTGTGGACTTCTACTCCTCATACAAGGACTGTGGCAATGGTGATGACTACGGCGAAGTTCTCCACTGCTGCGGTATCATGTGCAACTGCTGTCATGCTTGTGCACATTATTCCGGATTTATTAAGTGTCAAAACTAGGGAGCTATTCTTGAAAAACAAAGCGGCGGAACTTGATCGTGAAATGGGTCTTATTCGGACACAGGAGGAGACGGGTAGATATGTTAGAATGCTAACACATGAAATCAGAAGTACTCTGGATAGACATACTATTTTGAAGACTACACTTGTTGAACTTGGAAGAGCATTGCAACTGGAAGAGTGTGCTTTGTGGATGCCGACTCGAACTGGAGTGGAGCTTCAACTTTCTTACACTTTACATCATCAAAATCCAGTTGGATTTACAGTACCTATACAACTCCCTGTAATTAATCAAGTTTTCAGTGCAAATTGTGCTGTTAAAATTTCACCTAATTCTGCCGTTGCAAGGCTTCGACCTACCCGGAAGTACATTCCAGGTGAGGTGGTTGCTGTTAGGGTCCCACTTTTGCATCTCTCAAATTTTCAGACTAATGATTGGCCCGAACTCTCGCCGAAGAGCTATGCTTTGATGGTTTTGATGCTTCCTTCAAATAGTGCAAGACAATGGCATGTCCATGAATTGGAGCTTGTTGATGTGGTAGCCGATCAGGTAGCTGTTGCTCTCTCCCATGCTGCCATCTTGGAGGAATCAATGAGGGCTCGAGATCTTCTTATTGAGCAGAATGTGGCTCTTGATCTGGCAAGAAGAGAAGCAGAAACAGCTGTTCGTGCGCGTAATGATTTCCTGGGTGTTATGAATCATGAAATGAGAACTCCCATGCATGCGGTGGTTGCACTTTCATCTTTGCTGCAAGAAAGTGAACTGATACCCGAGCAGCGTCTGATGGTGGAAACAATCCTAAAGAGCAGCAACCTTTTAGCAACTCTCATTAATGATGTCTTGGATCTTTCAAGGCTAGAGGATGGAAGCCTTCAACTTGATGTTGGGACTTTCAATCTTCATGCTCTCTTCAGAGAGGTCCTTAACTTAATCAAGCCTGTTGCAGCTGTAAAGAAGCTGTTTGTCACGCTTAGTTTGTCTTCGGATTTTCCGGAAGTTGCTATTGGAGATGAAAAACGGCTCATGCAAATTCTTTTAAATGTTGTTGGCAATGCTGTAAAATTCTCAGAAGAAGGCAGTGTGTCAGTTTCTGCAGTTAATGCAAAATCAGAATCTCTAATAGATCCTAGAGCTCCAGAGTTTTTTCCTGTGCAGAGTGAGAATCACTTCTATTTGCGTGTACAGGTAAAAGATACAGGATCAGGCATTAATCCTCAGGATTTCCCCAAGTTGTTCTGTAAATTTGCGCAAAACCAGGAACCAGCAACTAAAAATTCTGCTGGCACTGGACTTGGCCTTGCAATTTGTAAGAGGTTTGTAAATCTTATGGAAGGACACATTTGGATTGAAAGTGAAGGTGTCGGGAAGGGTTCTACTGCTATCTTTATTGTTAAACTTGGCATTCCTGGTCGCTTAAATGAGTCAAAGCTTCCCTTTACGGCCGGATTGCCTGCAAATCACATGCAGATGACTTTTCAAGGACTAAAGGTCTTGGTTATGGATGATAATGGGTTTAGCAGGATGGTAACGAAGAGTCTGCTAGTGCATCTAGGGTGCGATGTAACAACCATTGGCTCCGGTGATGAGTGCTTGAGAATCCTTACTCGGGAACACAAAGTACTAATCATGGACGCAAGTATAACAGGTATGAACTGTTATGATGTTGCCGTCAGTGTACATGAGAAATTTGGAAAACGTCTCGAGAGGCCACTTATTGTGGCACTAACTGGGAACACTGACCAAGTGACAAAAGAAAACTGCTTGAGAGTTGGAATGGATGGAGTTATTCTGAAACCTGTTTCAATTGATAAAATGAGAAGTGTTTTATCCGGGCTTTTAGAGCACGGAACTGTTCTTTAATCCCAGTAAACCAAAATTGTCTCAAGACTCGTACTCTTGAGTCTCAGAAATCAGAATACAAGTGTGTCGTAAATACAATCTCCGATTTTTCGCAAAAACAACGATTTGTTCACGATGATGATGCAGTATGGCTGATTGCAGTTTCATTTATCTTATGTAATCCTCAGTAGCTTTGTATAAAGTAGTTAGGTCTACAATCTATGCATATATATAGGACTAGTTAATGTCTTTCCTGTAAGGTTTGATGTAAGAAAAATACAATGACAGTCGAATTCAGCTCGAGTTTTAATTTGTTTGTCTTAGTGTTCTTTTTAAAATATTGGCAATTAACACCCTACATGTGAAGGAAAGGAAACCAAAAAGGAAAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g056580.2.1SL2.50ch07:64389801..64395436737+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g056580.2SL2.50ch07:64389287..643958046,518+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g056580.2.1.1SL2.50ch07:64389287..64389415129+n/a
exonexon:Solyc07g056580.2.1.2SL2.50ch07:64389757..64390701945+n/a
exonexon:Solyc07g056580.2.1.3SL2.50ch07:64392193..64392561369+n/a
exonexon:Solyc07g056580.2.1.4SL2.50ch07:64393081..64393347267+n/a
exonexon:Solyc07g056580.2.1.5SL2.50ch07:64393480..64393607128+n/a
exonexon:Solyc07g056580.2.1.6SL2.50ch07:64393800..64393997198+n/a
exonexon:Solyc07g056580.2.1.7SL2.50ch07:64395088..64395804717+1
intronintron:Solyc07g056580.2.1.1SL2.50ch07:64389416..64389756n/a+n/a
intronintron:Solyc07g056580.2.1.2SL2.50ch07:64390702..64392192n/a+n/a
intronintron:Solyc07g056580.2.1.3SL2.50ch07:64392562..64393080n/a+n/a
intronintron:Solyc07g056580.2.1.4SL2.50ch07:64393348..64393479n/a+n/a
intronintron:Solyc07g056580.2.1.5SL2.50ch07:64393608..64393799n/a+n/a
intronintron:Solyc07g056580.2.1.6SL2.50ch07:64393998..64395087n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17885633%2Fdetails feature 17885633
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