Solanum lycopersicum mRNA Solyc07g062530.2.1

mRNA details  
Name
Solyc07g062530.2.1
Type
mRNA
Length
3,357
Organism
Solanum lycopersicum
Description
Phosphoenolpyruvate carboxylase 2 (AHRD V1 ***- Q9SCB2_SOLLC); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylase
Location(s)
SL2.50ch07:65227490..65233583
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006099
  • GO:0003824
Length
6094
Nb exon
11
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g062530.2.1 Phosphoenolpyruvate carboxylase 2 (AHRD V1 ***- Q9SCB2_SOLLC); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylase

GTGACAAAGTAGAGTGTAAGAGCTTATTATATAGTGAACAATTCTCTCTTTTAGATCACAAATCCCTTGAACAAACAAAGCAAaaaccaaatcatttttctaagttaaaaaaaaaaaatctgatttttgTTTTTCTTACTGGAAAAAAGCTTCTTTTTTTTCCTTTCTTCATCATCTGGGTTCTAAAATAAATCAAGATTCAGGATTTTGATTTTGTAGTTTGAGTAAAAAGGGGGTTGATGGCTACTCGTAATTTGGAGAAATTTGCATCTATAGATGCACAGATGAGGCTTTTGGTACCTACTAAGGTGTCTGAAGATGATATGCTTGTTGAGTATGATGCTTTGCTTTTGGATCGATTTCTTGATATTCTTGAGGATTTGCATGGAGAGGGTATCAAAACAACAGTCCAAGAATGTTATGAGCTTTCTGCTGAGTATGAAAACACGCATGATAAGAAGAAGCTGGAGGAGCTTGGCAGTGTGTTGACAACTTTGGATCCAGGGGATTCAATTGTTGTTGCTAAGTCGATATCCCATATGCTTAACATGGCCAACTTGGCTGAGGAGGTTCAGATTGCCAACAGTGGGAGGGCAAAGTCGAAAAAGGGCGAACTTTCAGATGAGAGCAACTTGATGACTGAATCCGACATTGAAGAAACACTCAAGAGACTTGTAGTGAACTTGAACAAGTCTCCTCGAGAAGTTTTTAATGCTCTGAAGAATCAGACTGTGGATTTGGTCTTTACTGCTCATCCGACTCAAGCTATCCGAAGATCTTTGCTTCAGAAGCATGCAAGGATCCGCAATTGTTTGTCTCAGTTGTATGCTAAAGACATTACACCCGACGATAAAGAGGAGCTGGATGAAGCTTTAGAGAGGGAGATTCAAGCTGCTTTCCGCACTGATGAAATCAGAAGGACTCCTCCAACACCACAAGATGAAATGAGAGCTGGAATGAGTTACTTCCATGAAACAATTTGGAACGGTGTTCCGAAGTTTCTACGACGTGTAGACACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTCATTCAGTTCTCGTCTTGGATGGGTGGCGACCGTGATGGTAATCCAAGAGTAACTCCTGAGGTCACTAGAGATGTTTGCTTATTGGCCCGAATGATGGCAGCGAATTTGTACTACTCTCAGATAGATGATCTAATGTTTGAGTTATCTATGTGGCGTTGCAATGACGAGCTTCGTGATCGGGCAGATGAACTACACCGTTCATTAAAGAGAGACGAAAAACACTATATAGAATTCTGGAAACAAGTTCCTCCAAGTGAACCATATCGTGTAATTATTGGTGATGTGAGAGATAAGCTATATCATACACGTGAGCGTACTCGCCAACTGTTATCCAATGGGTTCTCTGAAATTCCTGAGGAAGCAACATATACTAACATCAAGCAGTTCTTGGAACCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGGGATCGACCAATTGCTGACGGAAGCCTTCTGGATTTTCTACGACAAGTTTCTACCTTTGGACTCTCACTTGTGAGACTTGACATAAGACAAGAGTCGGATCGGCACACTGATGTCCTTGATGCCATTACCCAGCACTTGGAAATTGGTTCATATCGAGAGTGGTCTGAGGAACGTAAACAAGAGTGGCTTCTCTCTGAACTCAGCGGCAAGCGACCTCTATTTGGACCCGACCTACCAAAAACTGAAGAAATTGATGATGTTTTGAATACATTCCATGTCATATCAGAACTTCCATCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCTGTTGAGCTTCTACAGCGTGAATGCCACGTGAAGCAACCTTTACGGGTAGTTCCACTTTTTGAGAAATTGGATGATCTGGATGCTGCTCCTGCTGCTATTGCACGTCTTTTTTCAATTGAGTGGTACAAAAACCGCATTAATGGGAAGCAAGAAGTCATGATTGGCTACTCAGACTCTGGAAAGGATGCTGGTCGGCTGTCGGCAGCATGGCAGCTATATAAGGCTCAAGAGGAGCTTATAAAAGTTGCCAAACAATATGACGTGAAGCTAATTATGTTCCATGGCAGAGGTGGTACAGTTGGAAGAGGAGGTGGTCCTAGCCATCTTGCTATATTATCTCAGCCACCTGATACGATTCAGGGATCTCTTCGCGTAACAGTTCAAGGTGAGGTTATTGAGCAATCATTTGGGGAGGAACACTTGTGTTTTAGGACACTCCAACGTTTCACTTCTGCCACCCTAGAACATGGAATGTATCCACCTTTCCCCCCAAAGCCAGAATGGCGTGCACTTCTGGATGAAATTTCTGTTGTTGCTACAGAGAAGTATAGGTCAATAGTATTCAAGGAACCCCGATTTGTCGAGTACTTCCGCCTGGCAACACCCGAGCTGGAGTATGGTCGAATGAACATTGGTAGCCGTCCATCAAAGCGTAAACGAAATGGAGGCATAGAAACACTTAGAGCCATTCCATGGATATTTGCATGGACCCAGACTAGGTTTCATCTGCCGGTCTGGCTTGGCTTTGGGGCAGCATTTAAGTATGCACTTAACAAGGATAAAAAAAACCTCAATATGCTGCGGGACATGCACAAAAAATGGCCATTTTTTAGAGTTACTGCTGATTTGATTGAGATGGTGTTTGCTAAGGGAGACCCCGGCATTGCTGCTTTATACGACAAGCTTCTGGTTTCTGAAGATTTGTGGTCCTTCGGTGAGCTTTTGAGGTCTGACTATGAGGAGACAAAGAGCCTCCTGCTTAAGGTTGCTGGACACAAGGAACTTCTGGAGAACGATCCCTCCTTAAAACAACGACTCAGGCTGCGTGATTCCTATATCACTACTTTAAATGTCTGCCAAGCTTACACACTAAAGAGGATTCGTGATCCAACCTACAAAGTCACTCCAAGGCCTCACATTACCAAGGAATACATAGAATCGAAACCTGCTGCTGAACTCGTGAGCCTGAACCCACAAAGCGAATATGCTCCCGGCTTGGAAGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAATCTATTACTATGTTTTTATGTTTTAATGGTTGATAAAGTGAACATTAAGAATCATGTATCCTTGAGTTCATCTTTTTTTTTTTTTTGCAACTTCCATAAAATGGATGAATAATTATTCCCCTCTTTGTTTAGTAGCTTCTTGAATAAAATTATGATGTAAAAGAGTACTTCTCTTCATTTACCAAATGCTTTTTGCAATTAATCTCAGTTCCAATCTTTCAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g062530.2.1SL2.50ch07:65227930..65233360965+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g062530.2SL2.50ch07:65227490..652335836,094+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g062530.2.1.1SL2.50ch07:65227490..65227692203+n/a
exonexon:Solyc07g062530.2.1.10SL2.50ch07:65232582..65232968387+n/a
exonexon:Solyc07g062530.2.1.11SL2.50ch07:65233067..65233583517+n/a
exonexon:Solyc07g062530.2.1.2SL2.50ch07:65227895..65228098204+n/a
exonexon:Solyc07g062530.2.1.3SL2.50ch07:65228668..65229059392+n/a
exonexon:Solyc07g062530.2.1.4SL2.50ch07:65229206..6522929085+n/a
exonexon:Solyc07g062530.2.1.5SL2.50ch07:65229909..65230131223+1
exonexon:Solyc07g062530.2.1.6SL2.50ch07:65230355..65230458104+n/a
exonexon:Solyc07g062530.2.1.7SL2.50ch07:65230560..6523064788+2
exonexon:Solyc07g062530.2.1.8SL2.50ch07:65230917..65231071155+n/a
exonexon:Solyc07g062530.2.1.9SL2.50ch07:65231467..65232465999+2
intronintron:Solyc07g062530.2.1.1SL2.50ch07:65227693..65227894n/a+n/a
intronintron:Solyc07g062530.2.1.10SL2.50ch07:65232969..65233066n/a+n/a
intronintron:Solyc07g062530.2.1.2SL2.50ch07:65228099..65228667n/a+n/a
intronintron:Solyc07g062530.2.1.3SL2.50ch07:65229060..65229205n/a+n/a
intronintron:Solyc07g062530.2.1.4SL2.50ch07:65229291..65229908n/a+n/a
intronintron:Solyc07g062530.2.1.5SL2.50ch07:65230132..65230354n/a+n/a
intronintron:Solyc07g062530.2.1.6SL2.50ch07:65230459..65230559n/a+n/a
intronintron:Solyc07g062530.2.1.7SL2.50ch07:65230648..65230916n/a+n/a
intronintron:Solyc07g062530.2.1.8SL2.50ch07:65231072..65231466n/a+n/a
intronintron:Solyc07g062530.2.1.9SL2.50ch07:65232466..65232581n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17886615%2Fdetails feature 17886615
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)