Solanum lycopersicum mRNA Solyc07g063830.2.1

mRNA details  
Name
Solyc07g063830.2.1
Type
mRNA
Length
1,709
Organism
Solanum lycopersicum
Description
BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch07:66161204..66164985
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3782
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g063830.2.1 BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGCGGAAGAATTTCAACTAGGTAGAGGAAATTGGTGGGAATCATCAACTTCAGCTTCATCAACAACAACAACATCATCATCTAGAAATAAGTTTATCGATAGCGGAATTTCATCATGTACAACTCCTTCAGCATCGAGTACAACCGGTCTAAGCAGCATGGCAAGCAACTTTGTTAATTGGCCAATAGAAATTCATGAGGATATTAAAGTTAGATCCGAAAATAGTTCTATGGTTTTCTCGGGCACGGATTCCCATAAACGTTACGCCTCCGGAGGAGGAGGTGGAGGCGTGGGGCAAGGTGTTTTATCTGTTGATGATCCTAATTTACAAATAATGGGGTTAGGTCTATCTTCTCAAGGACTTGATTGGAATCAACCTTTTTTTCGTAGTGAAAAATCGGGGAGTGGTTTTCGTTCGTTAATTCAAGAAGGGTTGAGTTCAAATGCAAATTATCAACAAGAAGGAACATGTCAAGAACAAGATCATAATAATTGGAGTACGCAAAAATTATATCATGGGAATTCTGATGATTCTTCAGTAAATGATTATAATAAACAATTATTTAGTGGTCATAATAATAATCTTGAAAATTCAGCAGTACCTTATGGAAGTCCATCAAATATGTTACAAGGGTTATTAATTTCTGACCTTAATAGTCAACAACAAGAATCAAATAATTTTTCAAGTGTTAGTAGATCTTTATATTATAATCCTTCATATAATAACCAACCAAATTGTGATGTCAATATTCCTACTTCTACTTCATCATCATCTTGGTCTAAATTTCCTCAATTTCTTCGAACATCTGATCCTTCAAAAGTAGTACAACAGTGGTCACTGTCACAATCACCACCGCTATCTCATAGCCAGTTGTCACATTTCTCTGGTGGCACGTCTTTTTGGAACGCCACATCAGCTGCCGCGGAGGACGTCCGATCGGGTTTCCTCCCTCAGCTCCCCACCAACCCAACGGTTGATGAGAAACCAAAGCATACAGGTGAAGTTAGGAATACAAGCACAGTAACAAAGAAAAATAGCAGTGAAACATCAAATAAAAGACCAAGGAATGAAGCACCATCTCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAAATGGGAGACAGAATCACTGCACTTCAACAATTAGTCTCACCTTTTGGAAAGACTGATACAGCTTCTGTGCTATCGGAAGCAATCGAGTACATAAAGTTCCTCCATGACCAAGTTAATGTATTAAGCACCCCATACATGAAAAGTGGAGCTTCCATACAACATCAACAGAATACTGGTGATAAATCCAATGTAAATCCAGAAGGAGGAAAACAAGATCTTAGAAGTCGAGGATTATGTTTGGTCCCAGTTTCTAGTACCTTTCCAGTAACGCATGAAACAACAGTTGATTTTTGGACTCCCACCTTTGGAGGAACATTTAGATAATCAAGACAAAGAAGATTATAGTTGTACGAGTCTAAGTTATATACATCGTCAGTATAAAGAATTTTTTATACTATCAGGTCATTTTTTATTTGTTATAGCAGATCATTTATCTTGTTTTTTTCAAGATTAGAAATGTAAGGACGTATGCTTACCTGTAGATATCTTTTGAATCATGACCTGATAGTGTATAAATGATTCTTTATGTATATTGACGGTGTATAAAACTTAAAAGACCTGATAGTGTATAAATGATTCTTTATGTATATTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g063830.2.1SL2.50ch07:66161472..66164985480-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g063830.2SL2.50ch07:66161204..661649853,782-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g063830.2.1.1SL2.50ch07:66164600..66164985386-1
exonexon:Solyc07g063830.2.1.2SL2.50ch07:66163648..66164254607-n/a
exonexon:Solyc07g063830.2.1.3SL2.50ch07:66163022..66163129108-n/a
exonexon:Solyc07g063830.2.1.4SL2.50ch07:66162823..6616288866-n/a
exonexon:Solyc07g063830.2.1.5SL2.50ch07:66162195..6616226066-n/a
exonexon:Solyc07g063830.2.1.6SL2.50ch07:66161983..6616203351-n/a
exonexon:Solyc07g063830.2.1.7SL2.50ch07:66161204..66161628425-n/a
intronintron:Solyc07g063830.2.1.2SL2.50ch07:66164255..66164599n/a-n/a
intronintron:Solyc07g063830.2.1.3SL2.50ch07:66163130..66163647n/a-n/a
intronintron:Solyc07g063830.2.1.4SL2.50ch07:66162889..66163021n/a-n/a
intronintron:Solyc07g063830.2.1.5SL2.50ch07:66162261..66162822n/a-n/a
intronintron:Solyc07g063830.2.1.6SL2.50ch07:66162034..66162194n/a-n/a
intronintron:Solyc07g063830.2.1.7SL2.50ch07:66161629..66161982n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17888189%2Fdetails feature 17888189
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