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Solanum lycopersicum mRNA Solyc07g063850.2.1

mRNA details  
Name
Solyc07g063850.2.1
Type
mRNA
Length
2,155
Organism
Solanum lycopersicum
Description
Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Location(s)
SL2.50ch07:66204945..66207273
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2329
Nb exon
3
Sifter term
GO:0010279
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g063850.2.1 Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter

AGTTCACATAAACACTTCTTTCTCCTCTGTAACAAACTCTCTCTTTTTTGTTCACAAAATATAGTTTCACTTTTGTTAATTAAACAAAAACTATGCCTGAGGCACCAAAATCAGATGTTGTTACTGAAAAGAACAAGCAAATTCTTGATTTTATTGAAGAAGCTACCACCAATGTTGATGAGATTCAAAAGCAAGTCCTTGCTGAAATACTAAGAGAAAATGCACATGTTGAGTATTTGCAGCGCCATGGCCTTAATGGTCATGTTGATAGAGAAAACTTCAAGAAAATCATGCCTGTTATTACTTATGAGGATATTCAGTCTGATATCACTCGTATCGCCAATGGTGATAAATCTCAAATCCTCTGCTCTCAGCCCATCTCTGAGTTTTTAACAAGTTCTGGTACGTCTGGTGGGGAACGAAAACTGATGCCGACGATTGAGGAGGAACTTGCGAGAAGATCACAGCTTTACAGTCTTTTAATGCCTGTGATGAGTCAATTTGTTCCAGACCTTGAAAAAGGAAAAGGAATGTATTTTTTGTTTATAAAATCAGAGGCTAAAACACCAGGTGGATTACCAGCTCGTCCTGTTTTAACAAGTTATTATAAAAGCCCTCATTTCAAAAACAGGCAACCTGATCCATACACGAACTACACAAGCCCTAACGAAACCATTCTCTGTTCTGATTCATACCAAAGTATGTATTCCCAAATGCTCTGTGGCCTTTGCCAGAACAAACAAGTTCTTCGTGTGGGTGCTGTTTTTGCCTCAGGTTTTATCCGTGCCATACGATTCTTAGAAAAGCATTGGCCACTTCTTTGTCATGATATCAGAGTCGGAACCATTAATTCCCAAATCACCGATCTCTCAATTCGAGAGGCGGTGATGAACATACTTAAACCAGATACAAATTTAGCAGATTTTGTTGAGGCTGAATGTAGTAAAAATTCATGGCAAGGGATTATTACTAGATTGTGGCCTAACACCAAATACATAGATGTTATTGTCACTGGTACTATGTCGCAATATATACCAACTCTTGATTACTATAGCAACGGTTTGCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGCTATTTTGGTGTCAATTTGAACCCTCTTTGTAAACCAAGTGAAGTCGCTTATACCCTTATTCCTACAATGGGGTATTTCGAATTCTTGCCTGTTCATCGAAACAACGGTGTGTCGAATTCAATTGCCATGCCTAAATCACTTAATGAGAAAGAACAGCAAGAATTGGTTGATTTAGTTGATGTCAAGATTGGGCAAGAGTATGAGCTTATTGTCACAACCTATGCTGGGCTTTATAGGTATCGTGTAGGCGATGTGCTGCGTGTAGCTGGATTCAAGAACAACGCGCCCCAATTCAATTTTATCTGCAGGAAGAATGTAGTGTTGAGTATTGATTCAGACAAGACGGATGAAGTTGAACTTCAAAATGCAGTAAAAAATGCAGTCACACATCTTATGCCATTTGATGCACATGTGACAGAATACACAAGTTATGCTGATACAACCACAACCATTCCAGGGCATTATGTGTTATACTGGGAGCTAAATGTTAATGGATCAACCCCAGTTCCTCCATCTGTTTTCGAAGATTGTTGTCTCACCATCGAAGAGTCTCTCAACAGCGTATACCGCCAAGGTCGTGCCTCAGACAAATCCATTGGGCCATTGGAAATCAAGATTGTTGAAAGTGGAACTTTTGATAAGTTGATGGACTATGCTATAAGTTTAGGTGCATCAATAAATCAGTACAAGACACCAAGATGTGTGAAATTTGAACCAATTGTTGAGCTATTGAATTCAAGAGTAGTGTCAAACTACTTTAGCCCAAAATGCCCAAAATGGGTGCCAGGACACAAGCAATGGAACAACATGAATTAAAAAAGTTTTAATTAGCTAGCACAAGTTTCTTTTGAGAGAGGATCAATTTTTAGTGCTAGATATAATTGTTAAGATCATCTTGGTTAGGTTGACCCAAACCAATTTTATGGTTTTTTTTCTTTTCTTAATTCACTTTAAATCTTGGTATTTAAGTCTTTGTAGAATTTAACTTGTTCTTCATGATGGTAGAATCTTGAATTTAGCCATGTACAAAAAGAAAAAAAACAGTTCCTATTCTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g063850.2.1SL2.50ch07:66205036..66207034608+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g063850.2SL2.50ch07:66204945..662072732,329+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g063850.2.1.1SL2.50ch07:66204945..66205341397+n/a
exonexon:Solyc07g063850.2.1.2SL2.50ch07:66205432..66206360929+n/a
exonexon:Solyc07g063850.2.1.3SL2.50ch07:66206445..66207273829+1
intronintron:Solyc07g063850.2.1.1SL2.50ch07:66205342..66205431n/a+n/a
intronintron:Solyc07g063850.2.1.2SL2.50ch07:66206361..66206444n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17888207%2Fdetails feature 17888207
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