Solanum lycopersicum mRNA Solyc07g064170.2.1

mRNA details  
Name
Solyc07g064170.2.1
Type
mRNA
Length
2,276
Organism
Solanum lycopersicum
Description
Pectinesterase (AHRD V1 ***- B9RXQ4_RICCO); contains Interpro domain(s) IPR018040 Pectinesterase, active site IPR000070 Pectinesterase, catalytic
Location(s)
SL2.50ch07:66430156..66432717
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005618
  • GO:0030599
Length
2562
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g064170.2.1 Pectinesterase (AHRD V1 ***- B9RXQ4_RICCO); contains Interpro domain(s) IPR018040 Pectinesterase, active site IPR000070 Pectinesterase, catalytic

ATGATATGTTACAAATTTGAACGCGGTCGGTGGTCCTAAAATACACTTTCAACTCAAATTTTGAAAAAAACTTTTACGAGTATTTTCAAGCGTCTATTATTATCTAGGTTAAAGTTTGACCGCATAAAATACGTCATGCCTCATATTATATAAACAAAGTATTATAGTAAGTGAAAGTGTATCAAAACACTCAACACACATAGTTTGCAAACTTCTAAAATGGCTAATCCTCAACAACCTTTGTTAATAAAAACACACAAACAAAATCCAATAATCAGCTTCAAGATCCTCAGTTTTGTTATAACTTTGTTTGTTGCTCTCTTCTTAGTTGCTCCATATCAAGTTGAGATTAAACATTCTAATCTATGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTCTCTGATTTGATATCCAATGAAATTGTCACAACAGAATCAGATGGACATAGTATTCTGATGAAATTTTTAGTTAACTATGTCCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATGAAGAATCAGATCAATGACATTCGTCAACACGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCAGTCAGTTGATTTCGCATCTGATTCAATTGCAGCAATTGATAAAAGAAGTCGCTCGGAGCATGCCAATGCGCAAAGTTGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGAAGAGTTGATCTCGAGAGCTAAGGTAGCATTAGCGATGCTTGCGTCTTTGACAACTCAGGATGAGGATGTTTTCATGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCGATGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGACATTATAGCGAATGCAGTGGTGGCACAAGATGGAACGGGGGATTATCAAACACTTGCTGAAGCAGTTGCTGCAGCACCAGATAAGAGTAAGACGCGTTATGTAATTTATGTAAAGAGGGGAACTTATAAAGAGAATGTTGAGGTGGCTAGCAATAAAATGAACTTGATGATTGTTGGTGATGGAATGTATGCTACGACCATTACTGGTAGCCTTAATGTTGTCGATGGATCAACAACCTTCCGCTCTGCCACTCTTGCTGCAGTCGGCCAAGGATTTATACTACAGGACATATGTATACAGAACACAGCAGGGCCAGCGAAAGACCAAGCAGTGGCACTTCGAGTTGGAGCTGATATGTCTGTCATAAATCGTTGTCGTATCGATGCTTATCAAGACACCCTTTATGCACATTCTCAAAGGCAATTCTATCGAGACTCCTACGTGACAGGTACTGTTGATTTCATATTTGGTAATGCAGCAGTTGTATTCCAGAAATGCCAGCTCGTAGCTAGAAAACCGGGTAAATACCAGCAAAACATGGTGACTGCACAAGGCAGGACGGACCCAAATCAGGCCACGGGGACATCAATTCAGTTCTGTAACATAATAGCAAGTTCGGACCTAGAACCAGTCCTGAAAGAATTCCCAACATATCTTGGTAGGCCATGGAAAGAATATTCAAGAACTGTAGTGATGGAATCATACTTAGGTGGTCTCATTAATCCAGCGGGTTGGGCTGAGTGGGACGGAGATTTTGCGTTGAAGACATTGTATTATGGTGAATTTATGAACAATGGACCTGGTGCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGTTATCATGTCATTACTGATCCCGCTAAAGCTATGCCGTTCACTGTGGCTAAGCTGATTCAGGGCGGATCATGGTTGAGGTCTACTGGCGTGGCGTATGTGGATGGATTATATGATTAGAGTATATATATGATGTGCCACATGAGCAGGGCAGAGCAAGCATAACACACAACTCTAGTGTGACAAGCATTTACATGGCTCATTCGTTACTACTAAGTTGTCAATAAGTTCTGTTTAGGGGTTCATAAGTTTATATACGTATATACATTTACATTGGTGATGAAGCTGAAACTGATGATGCTTTAATGTAATTATAGTTTTCTGAAAAAGGATATGAGTAATATTAGTTTTTCCCAGATGTGTATGGTTGTGGAACTGTTTATGCTTAAATTGGCAAGGGGTATTGAATAAAAATCTATTGTGTTACCTTTTGGCTGTTTCATATTTATTCTTTTTTTTTTTTGATCTATTTTGATTTCATAGTTGGAAAATTACGTGATTAATCATACTTATAGTAGTTAATTACCTAACATGGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g064170.2.1SL2.50ch07:66430374..66432301547+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g064170.2SL2.50ch07:66430156..664327172,562+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g064170.2.1.1SL2.50ch07:66430156..664313171,162+n/a
exonexon:Solyc07g064170.2.1.2SL2.50ch07:66431516..66431707192+n/a
exonexon:Solyc07g064170.2.1.3SL2.50ch07:66431796..66432717922+2
intronintron:Solyc07g064170.2.1.1SL2.50ch07:66431318..66431515n/a+n/a
intronintron:Solyc07g064170.2.1.2SL2.50ch07:66431708..66431795n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17888575%2Fdetails feature 17888575
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