Solanum lycopersicum mRNA Solyc08g005050.2.1

mRNA details  
Name
Solyc08g005050.2.1
Type
mRNA
Length
1,700
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *--* Q9M4A8_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch08:33228..35425
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2198
Nb exon
3
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g005050.2.1 Transcription factor (AHRD V1 *--* Q9M4A8_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

CTACTCTCATTTCTCACCTAACAAACAAAATCTCTCATTTTCTGTTTTTTGTAAAATTCTTCAATTTAATTGAATGACGGACTATAGATTATGGAGTAATACCAATACTACTAATACATGTGATGATACTATGATGATGGATTCTTTTTTATCTTCCGATCCATCCTCTTTTTGGCCTGCTTCCACTCCCAATCGTCCGACTCCGGTGAACGGAGTCGGAGAAACGATGCCGTTTTTCAATCAAGAGTCACTACAGCAAAGGCTTCAGGCTTTAATTGACGGTGCTCGTGAATCATGGGCATATGCTATTTTCTGGCAATCGTCAGTTGTTGATTTTGCGAGCCAAACTGTATTGGGTTGGGGAGATGGGTATTATAAAGGAGAAGAAGATAAGAATAAACGGAGAGGGTCGTCTAGTTCAGCAGCTAATTTTGTTGCTGAGCAAGAGCATAGAAAGAAGGTGCTTCGGGAGCTGAATTCATTAATATCCGGTGTACAAGCTTCCGCCGGAAACGGAACTGATGATGCAGTGGATGAGGAAGTGACGGATACTGAATGGTTTTTTCTGATTTCAATGACCCAATCGTTTGTTAACGGTAACGGGCTTCCGGGCTTGGCGATGTACAGTTCAAGCCCAATTTGGGTTACTGGAACAGAGAAATTAGCTGCTTCTCAATGTGAACGGGCCAGGCAAGCCCAAGGTTTCGGGCTTCAGACGATTGTGTGTATTCCTTCACCGGAGTCCAGGGAGATATTGAATTTTGGTGATAGTAGTAAGAGATTTTCAGGGCAATCACAGTTGGGTCCTGGGCCTGGGCTCATGGAGGAGAACAAGAACAAGAACAAGAACAAGAAAAGGTCACTTGGATCAAGGGGAAACAATGAAGAAGGAATGCTTTCGTTTGTTTCGGGTGTGATCTTGCCAACTTCAACAATGGGGAAGTCCGGGGATTCTGATCACTCAGATCTCGAAGCCTCAGTGGTGAAGGAGGCCGTTGTAGAACCTGAAAAGAAGCCGAGGAAGCGAGGGAGGAAACCAGCCAATGGAAGGGAGGAGCCATTGAATCACGTGGAAGCGGAGAGACAGAGGAGGGAGAAATTGAATCAAAGATTCTACGAGTTGAGGAGCCAAATTGAATGTTTAAGGAAGGAATTAACCAACAAGGGATCATCAAACTATTCCGCCTCCCCTCCATTGAATCAAGATGTCAAGATTGTCGATATGGACATTGACGTTAAGGTGATTGGATGGGATGCTATGATTCGTATACAATGTAGTAAAAAGAACCATCCAGCTGCCAGGCTAATGGCAGCCCTCAAGGACTTGGACCTAGACGTGCACCACGCTAGTGTTTCCGTGGTGAATGATTTGATGATCCAACAAGCCACAGTCAAAATGGGGAGCCGGCTTTATGCTCAAGAACAGCTTAGGATAGCATTGACATCAAAAATTGCTGAATCGCGATGAAATTATGTCCCTAGTGAGCTATGTATAATGTTATCTTCTAATGAGCGAGAATTTTCTTCTCTGTATATAAATGTGATGAAACCAATACTAGAGATCTCGAGTTGAGGCTTTTTAGTTCATGTAAGATTAGATATATATATATGATGCAGCTTCATCCTTTTGTATTCTTCATCCAGGAAATAAATGAGAAACCAATAATTGGTGGCTGATGATCAACTTCATGTTATTACTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g005050.2.1SL2.50ch08:33459..35352465-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g005050.2SL2.50ch08:33228..354252,198-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g005050.2.1.1SL2.50ch08:34690..35425736-n/a
exonexon:Solyc08g005050.2.1.2SL2.50ch08:33931..34311381-n/a
exonexon:Solyc08g005050.2.1.3SL2.50ch08:33228..33810583-n/a
intronintron:Solyc08g005050.2.1.2SL2.50ch08:34312..34689n/a-n/a
intronintron:Solyc08g005050.2.1.3SL2.50ch08:33811..33930n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17891734%2Fdetails feature 17891734
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