Solanum lycopersicum mRNA Solyc08g007530.2.1

mRNA details  
Name
Solyc08g007530.2.1
Type
mRNA
Length
1,319
Organism
Solanum lycopersicum
Description
AT-hook motif nuclear localized protein 1 (AHRD V1 ***- Q8VYJ2_ARATH); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296
Location(s)
SL2.50ch08:2071921..2078161
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003677
Length
6241
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g007530.2.1 AT-hook motif nuclear localized protein 1 (AHRD V1 ***- Q8VYJ2_ARATH); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296

TGCAAAAAATAAATATGAGTATGAGTGGAGTAACAGTGGTGGGATCAGATGCACCATCAGATTACCATGTGGCACCTAGGACCACTGAAAATCCCAGTCAAGTTTCTGGATCAGCACCTCAAATTACGAATATTACACCAACTCCGGTCACCGGTGCCGGCGCCGGCGTCGGTGCGGTTGCCGGAGCACTGGCGTTAGTGAAGAAGAAGAGAGGTAGACCAAGAAAATATGGACCAGATGGAGTTGCAGTGCCGTCCGCGGCGGCGCTTTCGCCGAAGCCGATTTCGTCGGCAGCTCCTGTGTCGTCGCCGGTGATTGATTTCTCATCGGAGAAACGGGGGAAAATCCGGCCGGTCGGATTATTTAGTAAGCCACATATGCCTAAGTTGGAGGTTGAAAATTCAGGTGAATGGGTCTCATGCTCCGTTGGTGCTAATTTTACGCCCCATATTATCACCGTTAATACTGGAGAGGATGTCACCATGAAGATTATATCATTCTCTCAACAAGGGCCTCGAGCAATATGCATTCTTTCAGCAAACGGTGTAATTTCAAGTGTTACGCTGCGTCAACCAGACTCTTCTGGTGGCACATTGACGTATGAGGGCCGGTTTGAGATACTGTCATTGACTGGATCATTTATGCCATCCGAGACGGGAGGAATGAGAAACAGGTCAGGAGGAATGAGTGTTTCTCTAGCAAGCCCTGATGGACGTGTTGTTGGAGGTGGAGTTGCCGGTCTACTAGTTGCTGCTGGTCCGGTCCAGATTGTTGTTGGGAGCTTCCTTGCTGGAAATCAACATGAACAAAAGACCAAGAAAAACAAATTGGAGCCTATTACAGCTGCTGTTGTTCCTATTACTAGTCCAAATATTGAAGAACCATGTAATCACTCTTCAGCAAAACCTACTATGCCCGCTTCCTCGATTAACTGGTCATCATCGTTGGCAACTGAGTCGAGAAGTAAGACAGCTGACATCAACGTAACGTTGCCTGCATAGGAGGGTAAAATCTTTCCGTTCTTATTTGATCCTTGATCCTCACATCCATTTGTTGTTATAACTTCTTTGTCAACCTCGTGTCCTCGAGCATGTCATTTTCCAGTTGAGGTATGCTGTATGCCTAGTAATCCGAACTAGTTTTCGTTGTAGTTTTTTTCTTTCTCCTCTGTCGTTCGCTCGTTGTAGGATTTTTAGTTGTATAATTGGTGTCAGAAATGAACTTATCTTAAGTTAAAGGCTTTATGTTTAGTTTTAGCCAAGGTAAATTGTTCATCTCTCTTCATGAAGTATGCGAAACTAATATAATTGCTCGCACGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g007530.2.1SL2.50ch08:2072238..2078147329-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g007530.2SL2.50ch08:2071921..20781616,241-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g007530.2.1.1SL2.50ch08:2077757..2078161405-2
exonexon:Solyc08g007530.2.1.2SL2.50ch08:2074212..207427968-n/a
exonexon:Solyc08g007530.2.1.3SL2.50ch08:2073786..2073917132-n/a
exonexon:Solyc08g007530.2.1.4SL2.50ch08:2073216..2073377162-n/a
exonexon:Solyc08g007530.2.1.5SL2.50ch08:2071921..2072472552-n/a
intronintron:Solyc08g007530.2.1.2SL2.50ch08:2074280..2077756n/a-n/a
intronintron:Solyc08g007530.2.1.3SL2.50ch08:2073918..2074211n/a-n/a
intronintron:Solyc08g007530.2.1.4SL2.50ch08:2073378..2073785n/a-n/a
intronintron:Solyc08g007530.2.1.5SL2.50ch08:2072473..2073215n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17894599%2Fdetails feature 17894599
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