Solanum lycopersicum mRNA Solyc08g007540.2.1

mRNA details  
Name
Solyc08g007540.2.1
Type
mRNA
Length
2,176
Organism
Solanum lycopersicum
Description
ACT domain containing protein expressed (AHRD V1 **-- Q10P43_ORYSJ); contains Interpro domain(s) IPR002912 Amino acid-binding ACT
Location(s)
SL2.50ch08:2088002..2091501
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008152
Length
3500
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g007540.2.1 ACT domain containing protein expressed (AHRD V1 **-- Q10P43_ORYSJ); contains Interpro domain(s) IPR002912 Amino acid-binding ACT

GTGAAGAAATTTTCTCAATTACTGAAAAGGGGTTCTAAAATTGTTTGTTTTGAAGCCAAATTCTTCTTCAATTTCTTCATTTTTATCATTTTTTTTGGGTCTTCGGTGCTGAAGGAAATTCTAACTGTTAATGGTGGAATTGAGCTGTTTCAGTGAAGAAATTTCTCATTTATGAAAAAGGGGTTTTGAAATTGTTTGCTTGAAACCGAACCCACCTCCATTTTCTTCTTTTTGATCTTGTTTTTGTCTCTGTTATTGAAGAAAATCCAATTTCAGTGAAGAAATTTCTCATTTCTGAAAAGGGGTTTTTGTAGATTTTGTGAAATTTATCTTTTTTTTTTGGTCTTTGGTGCGCTGAAGAAAGTTGGGAAAAAAAAATGAAATTCAACACAGATGATATGGAGTGGCCTACTTTTTTGGATGAATATGAAAAACTTGTTTTTCGAATGACTATTCCCAGGGTAATGATCGATAACGCTACTTCTTCAAATGCCACCCTTGTTAAGATAGATAGCGCGAGGAAACATGGGATTCTTCTTGAAGCCGTTCAAGTTCTAACAGATTTGAACCTTTCAATAAAGAAAGCTTACGTCTCTTGTGATGGGCGGTGGTTTATGGATGTTTTTCATGTTACTGACTTGGAAGGAAACAAGTTGACGGACAAAGGATTCATCAGTTACATCGAACAGTCACTTGGGACGATTCATTATGCAAGTTCAAAGAGCTATAATGGCTTGACAGCTCTGGAACTAACTGGAACGGATCGAATTGGCCTTTTATCGGAAGTCTTTGCTGTACTGTCAGATTTACAGTGCAATGTAGTTGAAGCTAAAATGTGGACTCACAATGGTCGTATTGCCTCCCTGATACATATTAAGGAAAGCCAGTCGGGGTACCCAATTGAGGACTCGCAGAAGATTGACAGAATTGAAGCCCGTTTAAGGAGCGTGCTTAAGGGGGATAATGATGTTCGAAGTGCTAAAACATCAGTGTCTATGGCTGTCACGCATACAGAAAGAAGACTTCACCAAATGATGTTTGCAGACCGTGATTATGAAAGAAAGCCAGTGATTAGGACTAGCAACGATACCCCGAGGGTATCGGTGTTGAACTGCTTGGAAAAGGGTTACTCCGTGGTAAATATTCAGTGCAAAGACCGAACTAAGCTGCTATTTGATGTCGTTTGCACGTTAACAGACATGCAGTATGTTGTGTTCCATGCCACAATTGATTCAGCTGGGGACAGGGCGTACTTGGAATTCTTCATTAGGCATACAGATGGAATCCCTATTAGTTCAGATGCTGAAAAGCAACGCGTGATTCTATGTCTACAAGCTGCTATTGAAAGAAGAGCATCCGAGGGAGTGAGACTAGAGCTATCCACGGAAGACAAACAAGGCTTATTGGCCGATGTAACTAGAACATTCCGAGAAAATGGTCTAAACGTGACGAGGGCTGAGATATCAACCACAGGGGAATCAGCTCTAAATATATTCTACATAACAGATGCGAGGGGGAATCCAGTCGATTCAAATATCATTGAGTCTGTTAGGGAGGAAATCGGATGGAGTAACTTGAAAGTGAAGGAATTGCCATTGATCAATCATCAAACGGCTGATAGAGACGAGCCTGCAGTGGGTGTAGGTGGGGCTATGTTGTTGTCACTTGGTAGCATATTTAGAAGGAATCTTTACAGCTTGGGGTTGATCAAGTCGTTTTCTTGATGCCACAAAAATGAATCTTCTCATACCAACTTACCAAAAAGAAGAATACGAGAAGTTCATATTCCTCCGAATTCACACTCTGGAAGCCTCAACGGACACCTAAGTTCGAGTGGCATGTACATATAGCTTAAGGATTACTGATAAAGTGAGTGATTCGTTGTTCAAGAAAAATGCATAGCTGTTGGAGAATCTGATACACACCCTGGTGGTATGTCTAAAGAGTCCGAGCAACATAGAGTGGATGGTATTGGGGGCCATTTAGCATTTGAAAGATGTGATAGGAGACAATGCCTCAATTTCAAGCAAGTTAAGGTCGTTTATATGAATTTCCATTGTCCATGACACTCAATTTAAGCATGCAAGGGATGGGTATGCAACGAGGACGCATCAATCTTGAAGCAACTCGAGATCAACTACATGAATCTTCACTGTCTATGTCGCTCCCCTTAAGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g007540.2.1SL2.50ch08:2088453..2091124449-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g007540.2SL2.50ch08:2088002..20915013,500-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g007540.2.1.1SL2.50ch08:2091042..2091501460-1
exonexon:Solyc08g007540.2.1.2SL2.50ch08:2090721..209076646-n/a
exonexon:Solyc08g007540.2.1.3SL2.50ch08:2090260..2090374115-2
exonexon:Solyc08g007540.2.1.4SL2.50ch08:2090097..209016468-n/a
exonexon:Solyc08g007540.2.1.5SL2.50ch08:2089333..2089899567-n/a
exonexon:Solyc08g007540.2.1.6SL2.50ch08:2088928..2089032105-n/a
exonexon:Solyc08g007540.2.1.7SL2.50ch08:2088002..2088816815-n/a
intronintron:Solyc08g007540.2.1.2SL2.50ch08:2090767..2091041n/a-n/a
intronintron:Solyc08g007540.2.1.3SL2.50ch08:2090375..2090720n/a-n/a
intronintron:Solyc08g007540.2.1.4SL2.50ch08:2090165..2090259n/a-n/a
intronintron:Solyc08g007540.2.1.5SL2.50ch08:2089900..2090096n/a-n/a
intronintron:Solyc08g007540.2.1.6SL2.50ch08:2089033..2089332n/a-n/a
intronintron:Solyc08g007540.2.1.7SL2.50ch08:2088817..2088927n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17894610%2Fdetails feature 17894610
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