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Solanum lycopersicum mRNA Solyc08g007910.2.1

mRNA details  
Name
Solyc08g007910.2.1
Type
mRNA
Length
2,400
Organism
Solanum lycopersicum
Description
Serine/threonine protein kinase (AHRD V1 *-** C4PKQ3_PRUPE); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch08:2412322..2421171
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0007165
  • GO:0006355
Length
8850
Nb exon
15
Sifter term
  • GO:0005515
  • GO:0004712
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g007910.2.1 Serine/threonine protein kinase (AHRD V1 *-** C4PKQ3_PRUPE); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

GTCACCGCCTCCGGCAGCCATGTACGATGGAGACGGCGACGATGAGTCAACCCCAGGTTTGGCTAAACGATTTTACTCACTTGAATCGAGTCATAGGAAGCTTGAAGAACAGTTCAATGTTTTATTGCAAGAAAAAAAGATAGATGATTCATTGAAAATGGATGATTCAGATGAGAAATTAATGGATTCAGGTGAAATGGGGTTTCGTGTTCCTGGGTTTTTTTCTACTGGAAGTCCGTATAGGAATGTGTTGAATCATATGGGTCATGCTGTTCATGTTAGTAGAGCTAGTACAGGGGAGATAATATATTGGAATCGATCTGCTGAAAGACTTTATGGTTATAAGGAGCATGAAGTACTTGGACAGATGACCACTGAGTTCCTTATATGTGAAGAGTATCATCAACTGGTAAGGATTGCCAGGGAAAGATTGCGCTATGGACAATCATGGTCCGGTCTGTTTCCTTGTAAGAAGAGGCATGGTCAGATATTTATGGCAATGTTGACAAAGAGCCCATTGTACGAGAATGGAGAGCTTTTTGGTATTATCACTGTCTCGAATGATGCAGCTTCATTCACTAATACAAACTCAAGCGACACAAGTTCCCATGAGGACAATGGTGAACCCGGTGCTCGGGAAATAAATTTCAAAAGGATTCAATGGAATCAACGACCACAAATTGCATCCTCTGTTTCAAATCTGGCCTCGAAAGTTTTCTCACTGAAGCGTGGAGAAGATGCATCTGCAGAAGTGAGCTCTAGGGATGAGGCTGATTTAGACACCAAAGAAGGAAAACCACTGAAGCCACCCAGAGCACCAGCTACACGGCTGAGTTTCAGTTTGCTTGGTGGGAAGAATAGAGCTAACACAGAGAGCTCTGAGAAGGATGAATCTTCATTTGACATCTCTCAGCCTTCCAAATTTGCGGCAAAGGTTATGTCAAAGCTGAATATTGCAGGATTTGGGCACATTAATAAAGAGAAGGGTCACCAGAACGGGGATGACGATACTCCTGTTGTTGAGAATGTAGCTGAACCACATTCATCAGCGGCATCAAATTCTACAGGAAAATATTGTCACTTTGTTGATGCACATCATCACCTCCAGAAAAACCAGAAAGGAAGTTATCATCCAGGAAGAACATGTGCCCCTACAACTGGGCATGATGGTCCTGGAGGGTCCTCCTCAAAAAACTCCGACAAATTTCCCGAGGCACTTGAAATTCCTGAACAGATTCCAGGATCATGTATGAGTGATGAACACCAGCAATCACCTAAGTCAGGTGGGAGCACAGATAGCTATGGGAATTCATCATTCAAAGTTGAAAATGAGTCGAGTTTGATAGTAGATTGTGCAATTTTATGGGAAGACATAAGCCTAAAGGAGGAAATTGGACGAGGTTCATATGGTGTTGTGTATCATGGAATCTGGAATGCGTCGGATGTTGCTGTTAAGGTTTACTTTGGGAATCAATGCAGTGAGGAAACATTGCTCGAGTACAAAAAGGAGGTTGAAATAATGAAAAGACTCAGGCATCCTAACGTGTTGCTATTCATGGGGGCTGTGTATTCTCAAGAAAAATCTGCCATCATCACAGAGTTTTTACCCAGGGGAAGTCTTTTCAAAACACTCCATGGAAATAATCATTTATTAGACTTCAGACGGCGTCTTAGGATGGCCCTCGATGTGGCAAGAGGTATGAATTATTTGCATCGCCGGAACCCACCTATTGTACATAGAGACCTTAAGTCATCAAACCTGCTTGTTGATAAAAGTTGGACCGTCAAGGTAGGAGATTTTGGCCTATCAAGATTTAAAGATTCAACCTTTTTAACAACAAAATCTGGTCGAGGGACGCCTCAGTGGATGGCTCCTGAAGTACTTCGAAATGAACCTTCAACAGAAAAATCTGATGTCTTCAGTTTTGGTGTGATCTTATGGGAATTAATGACCGAATCTATTCCATGGAACAACCTTAATTCTTTACAGGTTGTAGGAGTTGTCGGATTTATGGATCGTAGATTGGAAATTCCGGAACATCTTGATACTCGAGTATCTACAATCATCCTCGATTGTTGGCAAAGCAATCCAGCAATCCGTCCATCGTTCCAAGACATAATCCAAAGAACGACAGACATAATTCTCTCGTTTACAGGATCAACGACAGCTAGGAAGAACATAGGGACATAATATCAAACACGAATCGACAGGTTTTTTTCCAGATAACAACTTAGCAGGAGTTCACTTGTGTAAGTGAATTAGCAATACATGAGGCATCACAACTTTGTTTCTTTTTCTTTGACATTTTTTTTCTTGTTTTTTAAAGTTAAAAGGGTAAGGAGTTCCATTTACCCTGATAGTGAATGGATGTTAGAAAGCATATATGTTCTAATCCCTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g007910.2.1SL2.50ch08:2412340..2420962724+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g007910.2SL2.50ch08:2412322..24211718,850+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g007910.2.1.1SL2.50ch08:2412322..2412633312+n/a
exonexon:Solyc08g007910.2.1.10SL2.50ch08:2419511..241960999+1
exonexon:Solyc08g007910.2.1.11SL2.50ch08:2419692..241976069+n/a
exonexon:Solyc08g007910.2.1.12SL2.50ch08:2419858..241990750+n/a
exonexon:Solyc08g007910.2.1.13SL2.50ch08:2420342..242042382+n/a
exonexon:Solyc08g007910.2.1.14SL2.50ch08:2420664..242075895+1
exonexon:Solyc08g007910.2.1.15SL2.50ch08:2420857..2421171315+n/a
exonexon:Solyc08g007910.2.1.2SL2.50ch08:2416604..2416994391+n/a
exonexon:Solyc08g007910.2.1.3SL2.50ch08:2417082..2417198117+1
exonexon:Solyc08g007910.2.1.4SL2.50ch08:2417276..2417380105+n/a
exonexon:Solyc08g007910.2.1.5SL2.50ch08:2418009..2418483475+n/a
exonexon:Solyc08g007910.2.1.6SL2.50ch08:2418790..241883041+n/a
exonexon:Solyc08g007910.2.1.7SL2.50ch08:2418932..241900069+2
exonexon:Solyc08g007910.2.1.8SL2.50ch08:2419082..2419182101+n/a
exonexon:Solyc08g007910.2.1.9SL2.50ch08:2419324..241940279+n/a
intronintron:Solyc08g007910.2.1.1SL2.50ch08:2412634..2416603n/a+n/a
intronintron:Solyc08g007910.2.1.10SL2.50ch08:2419610..2419691n/a+n/a
intronintron:Solyc08g007910.2.1.11SL2.50ch08:2419761..2419857n/a+n/a
intronintron:Solyc08g007910.2.1.12SL2.50ch08:2419908..2420341n/a+n/a
intronintron:Solyc08g007910.2.1.13SL2.50ch08:2420424..2420663n/a+n/a
intronintron:Solyc08g007910.2.1.14SL2.50ch08:2420759..2420856n/a+n/a
intronintron:Solyc08g007910.2.1.2SL2.50ch08:2416995..2417081n/a+n/a
intronintron:Solyc08g007910.2.1.3SL2.50ch08:2417199..2417275n/a+n/a
intronintron:Solyc08g007910.2.1.4SL2.50ch08:2417381..2418008n/a+n/a
intronintron:Solyc08g007910.2.1.5SL2.50ch08:2418484..2418789n/a+n/a
intronintron:Solyc08g007910.2.1.6SL2.50ch08:2418831..2418931n/a+n/a
intronintron:Solyc08g007910.2.1.7SL2.50ch08:2419001..2419081n/a+n/a
intronintron:Solyc08g007910.2.1.8SL2.50ch08:2419183..2419323n/a+n/a
intronintron:Solyc08g007910.2.1.9SL2.50ch08:2419403..2419510n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17894911%2Fdetails feature 17894911
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