Solanum lycopersicum mRNA Solyc08g008030.2.1

mRNA details  
Name
Solyc08g008030.2.1
Type
mRNA
Length
1,500
Organism
Solanum lycopersicum
Description
AT-hook motif nuclear localized protein 1 (AHRD V1 ***- O04696_PEA); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296
Location(s)
SL2.50ch08:2522295..2528486
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003677
Length
6192
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g008030.2.1 AT-hook motif nuclear localized protein 1 (AHRD V1 ***- O04696_PEA); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296

TGTGATCTTTTAGTTCAAGATTCAATTTTTAGCATTTTTCACTGGCTTTTCTTACTTGGGTGTGCGTCTTTTTTCACCAGCATTCTGATTATTAGCTTTTTTCTTCAGTTCTTGAGAACCCCACTTAAGTCTTTTACTAAATTTATGTTAAAGTTTCAATCTTTTTGTGTATAGAAGCATCAAGAATCAGTTTTGGAAGTTTTTTAGTGAGTAAATGCATGGATGGAAGAGAAGGGATGGTGCTATCTGGGGGTGCTGCATATTATCTCAACAGAGGGATTAGTGGGTCTGGTTCTGGTGTTGGTGGTGGGTCTGGGGCACCTACAAGGGTAACTACCCCACCTAGTTATAAGTCCCTCTCAAACCCCAACATTTCAGTTCAGTCCAATGTAGGGGGAGGAGGTACTTTGAGTTCTACATACCAAGCTGTTGAGAACCCATCGCCTCATTTTTCTCATGGTATTAATATGAGTGTGGTATCTAGTGTTTCATCTGGTAGTGATCCAGTGAAAAAGAAGAGAGGTAGGCCAAGGAAATATGGTCCTGATGGGTCCAAAATGTCATTAGGACTGTCACCTTTGTCTTCTACTCCTTCAACTGGTTCAATCACTCCTGGGCCTAAGCGGGCCAAGGGCCGACCTCCTGGAAGTGGATGGAAGCAAAAATTAGCTCCACTTGGTGAATGGATGAATACTTCAGCAGGATTGGCTTTTACCCCTCATGTTATAAACATCAGCGTAGGAGAGGATGTTGCTGCAAAATTACTGGCGTTTGCAGAACAGAGGCCTAGGGCTTTATGTGTCTTATCAGCTAGTGGGTCACTTTCTGCAGTAACATTACGGCCTCCTACAAGCTCTGGTTCGACTGTCACCTATGAGGGTCGTTTTGAGATACTTTGCTTGTCTGGATCGTACTTGGTCGCTGAAAGTGGAGGTCCACGTGATCGCACCGGTGGTATAAGTATATCAGTTAGCAGCCCTGATGGGCATGTACTCGGGGGTGCTGTTGGTGGTAGGCTCATTGCAACCAGCCCTGTACAGGTGGTTGTGTGCAGCTTTGTATATGGTCCCAAGGTAAAGAGCAAACCAGAAACTAGTACCAAAGGCAGTGAGGAAGAATCTGCTGAAAAGCCATCTATACCGATTAAGGCTACTCTGAGTCAAGATCCAACTTCAAATCCAGCAACTGGCGTTTGGCCTCCGATTTCAAGGCCTGAACTAAGAAATTCCCAGCCCGAGATTGACCTGACACGTGGATGATTATTTATGATTTGCTTCAATGGGCACATGAAGACAGAGGTTGTATATATGTGCTGTTGTTGTAAATGAAACGCGGCAGGAGAGATCAACTCGAGCCATTTAACTAGCTCTGCCCATCTAGTAGAATGATGGTTTTGGCTAACACACAATGTAACAAAAGTATCCTCTTTTTTAGGTTCTTTAAAGTAGCAAAATGGTGTAGAAGATGGTGTTGGTGGAAGTTAGATTGTAATATTTCTGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g008030.2.1SL2.50ch08:2522535..2528268347-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g008030.2SL2.50ch08:2522295..25284866,192-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g008030.2.1.1SL2.50ch08:2527809..2528486678-2
exonexon:Solyc08g008030.2.1.2SL2.50ch08:2526088..252615568-n/a
exonexon:Solyc08g008030.2.1.3SL2.50ch08:2525140..2525271132-n/a
exonexon:Solyc08g008030.2.1.4SL2.50ch08:2523084..2523245162-n/a
exonexon:Solyc08g008030.2.1.5SL2.50ch08:2522295..2522754460-n/a
intronintron:Solyc08g008030.2.1.2SL2.50ch08:2526156..2527808n/a-n/a
intronintron:Solyc08g008030.2.1.3SL2.50ch08:2525272..2526087n/a-n/a
intronintron:Solyc08g008030.2.1.4SL2.50ch08:2523246..2525139n/a-n/a
intronintron:Solyc08g008030.2.1.5SL2.50ch08:2522755..2523083n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17895079%2Fdetails feature 17895079
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)