Solanum lycopersicum mRNA Solyc08g008100.2.1

mRNA details  
Name
Solyc08g008100.2.1
Type
mRNA
Length
1,674
Organism
Solanum lycopersicum
Description
1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** P93235_SOLLC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II
Location(s)
SL2.50ch08:2580112..2582839
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0009058
  • GO:0030170
Length
2728
Nb exon
3
Sifter term
  • GO:0042802
  • GO:0016847
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g008100.2.1 1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** P93235_SOLLC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II

CTTTGTTTTGATTTAATTCAAGAATGGATAGTCAACAACCCAAAAGCCTCAATTTGTACATATGAAGGAGTTCAAGATTTTCAAGATACTGCTATTTTTCAAGACTATCATGGCTTGCCAGAATTTAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTACTTATATATATATATATATATATATATATATATATATTTTTCGATAAAATATAATCGTTCAAATaataacctcATAAAATGACACAAACAACATGTATCATCTGCTATAACAAGTTAAACTATATTACTATACGATCGGATTACGCAAAAGATAACTATCTAATTATTGCGTTGTATTGCAGATTTGATAGAGATTTGAGATGGAGAACAGGAGTACAACTTTTTCCTGTTGTTTGTGAGAGTTCTAACAATTTCAAGGTAACAAAAGAAGCCTTAGAAGAAGCATATAGTAAAGCTCAAGAATCAAATATCAAAGTAAAAGGATTACTTATAAACAATCCATCAAATCCATTAGGTACAATTTTGGACAAGGAAACATTAAAAGACATATTAAGATTCATCAATGACAAAAACATACATCTAGTATGTGATGAAATCTATGCAGCAACCGCGTTTAGTCAACCTTCATTCATCAGTATCTCAGAAGTCAAGAGTGAAGTTGTTGGATGCAACGATGATTTAGTACACATTGTGTATAGTCTATCGAAAGATCTAGGGTTTCCTGGATTTAGGGTTGGGATTATTTACTCGTACAATGATGCCGTTGTCAATATTGCACGTAAGATGTCAAGTTTTGGACTTGTTTCAACACAAACACAAAGATTGATTGCTTCAATGTTATTAGACACTATCTTTGTTGAAGATTTCATCGCGAAGAGCTCGATGAGATTGTTACAAAGATATGGTTTGTTTACTAAAGGATTAGGTCAAGTTGGAATTACAACATTGAAGAGTAATGCTGGTTTGTTTATTTGGATGGATTTAAGAAGGTTTCTTGAGAATTCAACATTTGATGATGAATTGAAACTTTGGCATATAATTATTGATAAAGTGAAGCTTAATGTTTCACCTGGTTGTTCATTTCATTGCTCAGAGCCAGGTTGGTTTAGGGTTTGTTTTGCTAATATGGATGATGCTACAATGAAGATTGCATTGAGAAGAATTAGACATTTTGTCTATTTACAACCAAATAAGGGAGTTGAAGTTGCAACAAAGAAACAATACTGTAGAACAAGGAGCAAACTTGAAATTAGTTTGTCATTTAGGAGATTGGATGATTTTATGAACTCTCCTCATTCACCTATGTCTTCTCCTATGGTCCAAGCAAGGAATTAATCGTACGTATGTGGTGTTCTGATCAGCTTCTACACACATCGTTCAATTATGGACATGTCGACTATTTCACTGAGTACCTGATTGTAAGTTTACATAACATAACATAGAATGGAAGTTTATATATAGTGATTCTTTGTATTCTTTTATTAAAAGTTTTTTTTTTTTGCCTATAATATACTATGGTTGCAAAAAAAAAAAATCAAGTTATGGGATTTTATTATATTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g008100.2.1SL2.50ch08:2580336..2581971366-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g008100.2SL2.50ch08:2580112..25828392,728-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g008100.2.1.1SL2.50ch08:2582708..2582839132-n/a
exonexon:Solyc08g008100.2.1.2SL2.50ch08:2581891..2582190300-n/a
exonexon:Solyc08g008100.2.1.3SL2.50ch08:2580112..25813531,242-n/a
intronintron:Solyc08g008100.2.1.2SL2.50ch08:2582191..2582707n/a-n/a
intronintron:Solyc08g008100.2.1.3SL2.50ch08:2581354..2581890n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17895135%2Fdetails feature 17895135
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)