Solanum lycopersicum mRNA Solyc08g008600.2.1

mRNA details  
Name
Solyc08g008600.2.1
Type
mRNA
Length
1,584
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch08:2998162..3001351
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3190
Nb exon
2
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g008600.2.1 BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CAAATAGAAATTGTACTAGTTGAAAATGGAAAATTTAAATATATCTACTTCATCAACTCCTTCACAACCAAACACACTTCAAAAAACCCTTCAATATATAATCCACAATCGTCAAGAATGGTGGGTTTATGCCATTTTTTGGCAAGCATCCAAGGACGTTAATAACCGTCTCATTTTATCGTGGGGCGATGGCCATTTTCGCGGAACTAAAGACACAACAGGTTCCACGAAAACAGGTCATGGTCAATATCATCAATTTCAGAAGAAATTTGGTTTCAATGATATTAGTGAAACAAATAATAACGTTACGGATACAGAGTGGTTTTATATGGTGTCTATGCCACAATGTTTCGTGGCCGATGATGACCTCGTTATACGAGCTTACACCTCGGCCTCACACGTGTGGCTAGCTAGCTATTACGAATTGCAAATTTATAATTGTGAGAGAGCTAAAGAAGCTAATTTACATGGAATACGTACGATTGTGTGTATTTCTACGACTAGTGGTGTTGTTGAATTGGGTTCCTCTGATGTTATTCAAGAAAATTGGGAATTTGTTCAATTCATTAGGTCTCTATTTGGATCAAATAATAACATGAATACGACTTCTCATCTACCTGTCAATCAAGTAACCTTGGGAGATGATCATAAGGTTGCAAAATGTGGATCTAATATAATAGTAAAGCAAGAAATGACTATCGGAAATTTATTATCTGAATCGGGTATTTCTGATTTCGAAAATGATGACTCTTTAACCATCAACAATGTTATGAATGGGTCAATAAAACGAGCAAAGAAGGGTGATTCGAGCCATATAAGACGAGAAATGGCTATGGATGTTCACGTAGAGGCAGAGAGAAAAAGAAGGGAAAAGTTAAATCATAGATTTTACGCTCTACGGAGCGTAGTCCCATACGTGTCCAAAATGGACAAGGCTTCATTGCTAGGTGACGCAGTTACTTATATCAATGAACTTAAAGCTAAAATTAAAAATTTAGAATCCAAATTAATCGAGCCCCAGAAAAAACATATACTTATGGAACAACACGATTCTCATAGTGCATCCTCCACTATTGTAACTGATCATGGGGCAAACAACAAGTCATTATTTTCTAGCAACGGGGTACGAAACGGGATGGAAATTGAAGTGAAAATTATTGGATCTGAAGGTGTGATTCGGGTTCAATCTCTGGATATGAACTATCCATGTACTAGATTGATGAACGCGATGAAAGAAATGAAATTTCAGATTTACCATGCAAGTATTTCCAGTGTTAAAGATTTGATGCTTCAAGATATCGTGATTAGGGTTCCTGAGGAGTTTTCGAATGAGGAAACATTGAAATCTGCTATCATCTCAAAATTAAGTGTTATGGAGAATTAATTGATATGTATTAAGCATATAGTATTATTCTATGTAATTCATATATATGTGTGTATTTGTATTTGTTAGTTCGTTTAATTAGCTTGTATGTAACGTGTGTGACCATCAAGAGCGACTTTTGTTTGCTCTGATACCATATCATGTAGTGTGTAACTATCTTATCTAAAATTTTAAGTTATTAGATAAAACATATTTTTATT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g008600.2.1SL2.50ch08:2998186..3001151453+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g008600.2SL2.50ch08:2998162..30013513,190+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g008600.2.1.1SL2.50ch08:2998162..2998790629+n/a
exonexon:Solyc08g008600.2.1.2SL2.50ch08:3000397..3001351955+n/a
intronintron:Solyc08g008600.2.1.1SL2.50ch08:2998791..3000396n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17895657%2Fdetails feature 17895657
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