Solanum lycopersicum mRNA Solyc08g022210.2.1

mRNA details  
Name
Solyc08g022210.2.1
Type
mRNA
Length
1,635
Organism
Solanum lycopersicum
Description
Methylthioribose-1-phosphate isomerase (AHRD V1 ***- B6TZD1_MAIZE); contains Interpro domain(s) IPR005251 Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase
Location(s)
SL2.50ch08:30362857..30370766
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0044237
  • GO:0044249
Length
7910
Nb exon
9
Sifter term
GO:0003743
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g022210.2.1 Methylthioribose-1-phosphate isomerase (AHRD V1 ***- B6TZD1_MAIZE); contains Interpro domain(s) IPR005251 Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase

GTAAAAAAAAAGAGGGTTTATTTGATAGTTATGGATAATATGTGCTGGTTTTTGTTTCTTTTTCATTTGGTAAGGGAATAAGTGCCTGGGGCCTGGGGCCTGGAGCATGTGTTTCATGCTGTTTATGCTTATTCTATTTGAATGGAAAGACTGTTTATGTGGATCCTAATCCTATCATCATATTCCTCTTGTTTTTCACTCATATAAGTTTGGTCCGTGACCAAGGGCAATCAACGAATTAGGGTTTGTGTACACACAACATTCGGTAACAATGTCTGTTGGGAGTGGAGGAGACAAAACACTGGAGGCAATCTGTTATAGGCGCGGCTCACTTCAGTTACTTGATCAACGAAAACTCCCCCTAGAGACTCTTCATCTGGATATCCACGATACAAACGATGCCTGGGATGCAATTAAGGAAATGGTTGTCCGTGGGGCACCTGCAATTGCTATAGCTGCTGCACTGTCTTTGGCAGTAGAAGTTTCAAATTTAGCTTCTTTTGATGGGACTTCTCATGATGCATCAGTTTTCCTTAGTAAAAAATTGGATTTTCTTGTTTCAAGTCGTCCGACAGCTGTTAATCTTTCAGATTCTGCAGTAAAGCTTAAAGAAGTTATAAGCAAGGCTGCTGCCATAGCCAAAGAAGCCAATTCAGTGTTTCAGGCTTACATTGAAGCTGCTGAAGTTATGCTGGAGGATGATGTTACTTCCAATAAGGCAATTGGTTCATATGGAGCTAGTTTTATTAAGAATTACCTGACAGACTCTAAGAATATAACAATTTTGACCCATTGCAACACCGGAAGTCTTGCCACAGCTGGATATGGAACTGCTCTTGGTGTTATCCGGGCACTTTATGCTGACGGAGCTTTAGAAAGGGCATACTGCACAGAAACCCGTCCATTCAATCAGGGATCCAGATTGACTGCATTTGAATTGGTTCATGAGAACATCCCAGCCACCCTTATAGCTGATTCAGCTGCAGCTGCATTAATGAATGCTGGTCGTGTGAAAGCTGTCATTGTTGGAGCTGATCGTATAGCTGCAAATGGTGATACTGCCAATAAGATTGGAACTTACAACCTTGCTGTTTCTGCCATGCATCATGGTATACCATTTTACGTTGCAGCGCCTTTGACTTCTGTTGATCTATCTCTTTCTTCTGGACAAGAAATTGTGATAGAAGAAAGATCTCCAAAGGAACTGTTACATACACGAGGAGGACTTGGTGAACAAGTTGCTGCCTCTGGTATTTTGGTTTGGAACCCTGCATTTGATGTCACCCAAGCTAAGTTGATTAGTGGAATCATCACTGAGAAGGGTGTCATCACGAAGAATGGGACAGACACTTTTGATATTGCTGGGTTTGTGCGCAAGACAGCAGGAAATTTGTGATGCTGGTTTTGTTAAATGTTTGTTTAGTTGATATTTCTTGAGCTTTGCTAAACCCCTCCATCTTAGAGTGAGTAAAAAGTACTGACAAGGCAACATCTATTTCACTCCAATAATGTTAATCTATTGTGGTCCTATATGAACATGGAAAATTGTTTTGCTATGGGTAAGTAACAGTAATATGCCATGTCCCCATTGGCATCCGTATTTTGTCAATAAAAATGTTTGTCAATTTAAATATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g022210.2.1SL2.50ch08:30363127..30370527375+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g022210.2SL2.50ch08:30362857..303707667,910+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g022210.2.1.1SL2.50ch08:30362857..30363205349+n/a
exonexon:Solyc08g022210.2.1.2SL2.50ch08:30363321..3036337656+1
exonexon:Solyc08g022210.2.1.3SL2.50ch08:30363686..30363844159+1
exonexon:Solyc08g022210.2.1.4SL2.50ch08:30363959..30364058100+n/a
exonexon:Solyc08g022210.2.1.5SL2.50ch08:30364252..30364394143+1
exonexon:Solyc08g022210.2.1.6SL2.50ch08:30364599..30364704106+n/a
exonexon:Solyc08g022210.2.1.7SL2.50ch08:30369806..30369944139+2
exonexon:Solyc08g022210.2.1.8SL2.50ch08:30370032..30370300269+n/a
exonexon:Solyc08g022210.2.1.9SL2.50ch08:30370453..30370766314+n/a
intronintron:Solyc08g022210.2.1.2SL2.50ch08:30363206..30363320n/a+n/a
intronintron:Solyc08g022210.2.1.3SL2.50ch08:30363377..30363685n/a+n/a
intronintron:Solyc08g022210.2.1.4SL2.50ch08:30363845..30363958n/a+n/a
intronintron:Solyc08g022210.2.1.5SL2.50ch08:30364059..30364251n/a+n/a
intronintron:Solyc08g022210.2.1.6SL2.50ch08:30364395..30364598n/a+n/a
intronintron:Solyc08g022210.2.1.7SL2.50ch08:30364705..30369805n/a+n/a
intronintron:Solyc08g022210.2.1.8SL2.50ch08:30369945..30370031n/a+n/a
intronintron:Solyc08g022210.2.1.9SL2.50ch08:30370301..30370452n/a+n/a
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