Solanum lycopersicum mRNA Solyc08g062780.1.1

mRNA details  
Name
Solyc08g062780.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc08g062780.1.1
Length
1,791
  
Description
BHLH transcription factor (AHRD V1 **** Q84WX1_BRANA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch08:51899398..51902870
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3473
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g062780.1.1 BHLH transcription factor (AHRD V1 **** Q84WX1_BRANA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGAGAGGCTTAGGCCTATTATGAGCTTAAAAGGCTGGGATTACTGTGTTTTATGGAAGTTGAGTGAAGATCAAAGGTTTCTTGAATGGATTTGTTGCTGCTGTGGCGGAGCTGAGAAAAATATGCATGGCTGTGGACAAGAGATATTTTTTCCTGATTCTTCTACTTCAACTTGCAGAGATGTTATGTTTCAGCATCCAACAACAACTGCTTGTAATTTACTGGCTCAGGTCCCGCCTTCTCTGGCGCTAGACTGCGGAGTTTATGCACAGACCTTACTATCTAATCAAGCAAAATGGATGAACTTTGTTCCTTTCTCGGAATCAAATATCTCTAATGAAATAATGGGAACTAGAGCTCTGATTCCATCTCCTCTTGGATTGCTCGAGTTGTTCAGTACGCAACAACTAGCAGAAGATGAGAAAGTGATAGAATTTGTCTCAGCTCAATGCAATATCTACTTGGAGCAGCAAGCTATGATGAATTCAACTTTCTCAAATGGAGTTGAAGAGAACAACACATCAAAGCCTTTCCCAACAGAAGGAGAAAGAGACAGAGACGATCATATAAAAGATTCCCAAAATCATTACAAACAGAGAGTCTCCCCTGCAGCTACATCAGATCACTTGTCATTTGATTTCCCACTTAAACGAAAACAATTGGATTCTTGTTCGATGAACTTCCTTCCACCGTTCAGTACTTATAGCACACCAGAAGTGGATAACAACACAGGAGGGAACATGTTGTTTGATCAGAGCACAAGTGATATGACACATTTTTCGGAGAATAGGTACATGAGTGAGATGGATGCTTATTTACAGAAGCAAATGATGAGAAGCAGTAGTACTCAAGCTGGAATTGATGATGAATCAATCAAACATGATAACGGAAGATCAAATTCGGGATCTGATAGTGATCAAAATGAGGAAGAAGATGATCCCAAGTATAGAAGGAGAAATGGAAAAGGTCCTCAATCCAAGAATCTTATGGCTGAAAGGAAAAGAAGGAAGAAACTAAATGAAAGGCTCTATGCTCTTAGAGCTTTGGTTCCCAAAATCTCCAAGTTGGATAGAGCATCTATCCTCGGAGATGCTATTGAATATGTGATGGAATTGGAAAAGCAAGTGAAAGATCTGCAGCTTGAGGTTGAAGAACATTCAGATGACGACGGTACTGGTGGAGGAAGGAATTCGGACCAGATTCACCCCGTAGTTTTAAGCCATAATGGAACTAAAAACAGGCCTAAATCAGATAACGGAAAACTTACAAATGGAAGCCAAAGAGAAATATCAACTAATTCTAATGGCAGCACTGACCCTTCCAGAAAAAATCAAGATGTAGAAGAGAACGACAAATTGCAGCAAATGGAGCCACAAGTGGAAGTTGCTCAATTAGATGGGAATGAGTTCTTTGTGAAGGTGTTTCGTGAACACAAGGCTGGTGGATTTGTGAGGACTTTGGAGGCTTTGAACTCATTGGGCTTGGAAGTTACCAATGTTAATGCAACTAGGCATACTTGTTTGGTATCAAGTATCTTCAAAGTTGAACAGAAAAGGGATAATGAAATGGTTCAAGCTGATCATGTGAGGGACACCTTGCTAGAGCTGACAAGAAACCCTAGTAGAGGTTGGTCTGAAATGGGTAGAGCATCATCAGATAATATAAATAATAATAATGCAAATGGCACTACAGATTATCATCAACATCAACTTCATGATCATCACCTAGACAATAATAATCAACATAAGCAAACCAATTCTCATCACTTCCATACACACCACCATCACTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g062780.1.1SL2.50ch08:51899397..51902870597+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g062780.1SL2.50ch08:51899398..519028703,473+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g062780.1.1.1SL2.50ch08:51899398..5189947477+n/a
exonexon:Solyc08g062780.1.1.2SL2.50ch08:51899615..51899797183+1
exonexon:Solyc08g062780.1.1.3SL2.50ch08:51899952..5190003079+1
exonexon:Solyc08g062780.1.1.4SL2.50ch08:51900131..5190019969+n/a
exonexon:Solyc08g062780.1.1.5SL2.50ch08:51900413..51901069657+n/a
exonexon:Solyc08g062780.1.1.6SL2.50ch08:51901305..51901610306+n/a
exonexon:Solyc08g062780.1.1.7SL2.50ch08:51902309..51902485177+n/a
exonexon:Solyc08g062780.1.1.8SL2.50ch08:51902628..51902870243+n/a
intronintron:Solyc08g062780.1.1.1SL2.50ch08:51899475..51899614n/a+n/a
intronintron:Solyc08g062780.1.1.2SL2.50ch08:51899798..51899951n/a+n/a
intronintron:Solyc08g062780.1.1.3SL2.50ch08:51900031..51900130n/a+n/a
intronintron:Solyc08g062780.1.1.4SL2.50ch08:51900200..51900412n/a+n/a
intronintron:Solyc08g062780.1.1.5SL2.50ch08:51901070..51901304n/a+n/a
intronintron:Solyc08g062780.1.1.6SL2.50ch08:51901611..51902308n/a+n/a
intronintron:Solyc08g062780.1.1.7SL2.50ch08:51902486..51902627n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17902142%2Fdetails feature 17902142
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