Solanum lycopersicum mRNA Solyc08g065610.2.1

mRNA details  
Name
Solyc08g065610.2.1
Type
mRNA
Length
1,950
Organism
Solanum lycopersicum
Description
Vacuolar processing enzyme-1b (AHRD V1 **-- Q852T2_TOBAC); contains Interpro domain(s) IPR001096 Peptidase C13, legumain
Location(s)
SL2.50ch08:53747463..53753363
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
5901
Nb exon
10
Sifter term
GO:0004197
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g065610.2.1 Vacuolar processing enzyme-1b (AHRD V1 **-- Q852T2_TOBAC); contains Interpro domain(s) IPR001096 Peptidase C13, legumain

TATTAATGAAAAGAGAAATAGCAAAGGAGAGGCTATATCAGCAGCTACGTAAGAAGCTTCAAAAATTAAAAAAATCATGTATTGGTCCACTTAGTGGGAATCATCATCTCAGTTAACTATTGAATCTTAGCCGTCCACGTATATCACATGAATATTCTTTCATCTCTATAAATGTTTACATATTCATTACAGAACCTTTTCTATAATAACAACACTCTTGTTTTTTTAATTGTATTATCGGAGCTCGGATAATGAATCGTTCCGTCGCCGGAGTTTTGTTCCTGATTGCGCTCTCGTTAAACGTCTCCGTTTCCGAGAGCCGTAATTTTTTGAAACTTCCGTCTGAAGGTTCTAGATTCTTCGATGCCGATGAGATCGACTCCGTCGGTACTAGATGGGCTATTTTGCTTGCCGGATCAAACGGTTATTGGAATTACCGTCACCAGGCTGATATATGTCATGCATATCAACTGTTGAAGAAGGGTGGTCTCAAAGATGAGAACATTGTTGTGTTCATGTATGATGACATTGCAAACAATGAAGAGAACCCAAGGCAAGGAGTTATCATTAATAGCCCTCATGGTGAGGATGTTTACAACGGAGTACCTAAGGATTACACGGGGGATGATGTTACTGTTGACAACTTTCTTGCTGCTCTCCTTGGGAACAAAACTGCACTTACCGGAGGCAGTGGAAAGGTTGTAGATAGTGGTCCAAATGATCATATCTTCATCTTTTATAGTGATCATGGAGGTGCTGGAGTGCTTGGAATGCCTACCAATCCTTACCTCTATGCAAATGATCTGATTGATGCTCTGAAAATGAAGCATGCTTCGGGAACATACAAAAGCTTGGTATTTTACCTTGAAGCTTGTGAGTCTGGAAGTATGTTTGAGGGTCTTCTTCCTGAAGGTTTAAACATCTATGCCACAACAGCATCAAATGCTGATGAGAGCAGCTGGGGAACCTATTGCCCAGGGGAGTACCCTAGTCCTCCTATCGAATATGACACCTGCCTGGGTGACTTGTATAGTATTTCCTGGATGGAGGACAGTGAAAGACACAACCTGCGGACTGAAAGTTTGAAGCAGCAATATCACCTGGTCAAAGAGAGAACTGCCAGTGGGAATCCTGCCTATGGTTCGCATGTCATGCAATATGGTGATGTACATCTCAGCAAGGATGCTGTATTCCTATATATGGGTACCGATCCTGCAAATGATAATTCTACTTTTATGGATGACAATTCCTTGCGAGTATCAAAGGCTGTAAACCAGCGTGATGCAGATCTTGTGCATTTCTGGTACAAGTTCCACAAGGCTCCTGAAGGCTCTGTTAGCAAAACTGAGGCTCAGAAACGCTTAAATGAAGCAATATCACATAGAATGCACTTAGATAACAGCATAGCCCTTGTCGGTAAGCTTTTGTTTGGAATTAAAAAAGGTCCAGAGGTGCTGACTAGTGTCCGCCCTGCTGGTCAGCCGCTTGTTGACAATTGGGACTGTCTTAAATCTTATGTAAGAACATTTGAAACACATTGTGGATCGTTATCTCAGTATGGAATGAAACATATGCGCTCTGTTGCTAACATATGCAACGCTGGAATTAAAATGGAGCAGATGGTGGAGGCATCGGCACAAGCTTGTCCCAGTGTTCCATCCTATACCTGGAGTTCCCTCCACAGGGGTTTTAGTGCATGATTGGCATGTAATGCGAAATATGCACGCCTAGATGCTACCAAAATTATCCGTAATTATCAGTATGAAGATTGATATGGTTGTTTGCTAGTGTAATTGCTTCCTTGTAAATACAGTTTAGAAGCACATCAATATTGAGTGGAAATGTACTAGATGAACATTTCTTATTGTAAATATTGTTATAGTTGGTGATCATTGTAAATAACTCATTACTATGCAAAAAGTTCTACCTGAACAAACTTTCTTTACAAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g065610.2.1SL2.50ch08:53747842..53753112483-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g065610.2SL2.50ch08:53747463..537533635,901-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g065610.2.1.1SL2.50ch08:53752918..53753363446-n/a
exonexon:Solyc08g065610.2.1.10SL2.50ch08:53747463..537474686-n/a
exonexon:Solyc08g065610.2.1.2SL2.50ch08:53751286..53751450165-n/a
exonexon:Solyc08g065610.2.1.3SL2.50ch08:53750979..53751135157-2
exonexon:Solyc08g065610.2.1.4SL2.50ch08:53750111..5375019686-n/a
exonexon:Solyc08g065610.2.1.5SL2.50ch08:53749813..53750012200-1
exonexon:Solyc08g065610.2.1.6SL2.50ch08:53749210..5374925849-n/a
exonexon:Solyc08g065610.2.1.7SL2.50ch08:53748715..53748921207-n/a
exonexon:Solyc08g065610.2.1.8SL2.50ch08:53748205..53748411207-n/a
exonexon:Solyc08g065610.2.1.9SL2.50ch08:53747599..53748025427-n/a
intronintron:Solyc08g065610.2.1.10SL2.50ch08:53747469..53747598n/a-n/a
intronintron:Solyc08g065610.2.1.2SL2.50ch08:53751451..53752917n/a-n/a
intronintron:Solyc08g065610.2.1.3SL2.50ch08:53751136..53751285n/a-n/a
intronintron:Solyc08g065610.2.1.4SL2.50ch08:53750197..53750978n/a-n/a
intronintron:Solyc08g065610.2.1.5SL2.50ch08:53750013..53750110n/a-n/a
intronintron:Solyc08g065610.2.1.6SL2.50ch08:53749259..53749812n/a-n/a
intronintron:Solyc08g065610.2.1.7SL2.50ch08:53748922..53749209n/a-n/a
intronintron:Solyc08g065610.2.1.8SL2.50ch08:53748412..53748714n/a-n/a
intronintron:Solyc08g065610.2.1.9SL2.50ch08:53748026..53748204n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17902987%2Fdetails feature 17902987
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