Solanum lycopersicum mRNA Solyc08g068680.2.1

mRNA details  
Name
Solyc08g068680.2.1
Type
mRNA
Length
1,672
Organism
Solanum lycopersicum
Description
Decarboxylase family protein (AHRD V1 ***- B1ILJ6_CLOBK); contains Interpro domain(s) IPR002129 Pyridoxal phosphate-dependent decarboxylase
Location(s)
SL2.50ch08:57812621..57814771
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0030170
  • GO:0019752
Length
2151
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g068680.2.1 Decarboxylase family protein (AHRD V1 ***- B1ILJ6_CLOBK); contains Interpro domain(s) IPR002129 Pyridoxal phosphate-dependent decarboxylase

TTCTTTGCAAACAAAAAAAAGAAAAGAAAACTTATAAATTTTTGCGTTAAGAGAATGGGTAGTCTCTCACTTGAAATGGATTTTGAGCCATCACCCATGACACCCAGAAGTTTAGCAGCGATGACACCTAGAAGTTTAGCGCGACGACGATTGTTTCCGAACGTGGACAACAAGAAACAGAAAATGGCACAACCAGGTGCAGGACCAAGGAAGAACTTGGAACTTGAGGTCATGGAGCCTGCATTGAAGAATGATGGTCCTTCTTTGGACACTATCTTGGTTAATTATTTGGACACACTTACACAACGAGTCAATTATCATTTAGGTTATCCAGTCAACATATGTTATgatcactatGCAACGCTAGCACCACTTTTGCAGTTTCACCTAAACAATTGTGGTGATCCTTTCCTACAAAATACTGTCGATTTCCATTCTAAAGACTTTGAAGTGGCTGTTTTGAATTGGTTTGCAAAACTTTGGGAAATTGAAAAGGATCAATATTGGGGATATGTTACCAATGGTGGCACCGAAGGCAATCTCCATGGTATTTTGTTAGGGAGAGAGCTACTTCCTGAAGGAATATTATATGCATCAAAAGACTCTCATTACTCAGTATTCAAAGCTGCAAGAATGTATAGAATGGATTCAGAAACAATCAACACATCAGTAAATGGAGAGATGGATTATTCAGATTTAAGAGCAAAGTTACTTCAAAATAAGGATAAACCAGCTATTATAAATGTCACAATTGGAACTACATTCAAAGGAGCAATCGATGACCTGGATGTTATTCTTGAAATACTCAAAGAATGTGGCTATTCACAAGATCGATTTTACATTCACTGTGATGCAGCACTATGTGGTCTTATGACCCCTTTTATAAACAATATGATTAGTTTCAAGAAGCCAATTGGAAGTGTCACAATTTCTGGACACAAGTTTTTGGGATGTCCAATGCCTTGTGGTGTCCAAATAACAAGAAAAAGCTACATCAATAATCTCTCAACAAATGTGGAATACATTGCTTCTGTGGATGCCACTATTTCTGGTAGCCGTAACGGTTTAACTCCAATTTTCTTATGGTATAGCTTGAGCGCAAAAGGTCAAGTTGGACTTCAAAAGGATGTTAAAAGATGTCTCGACAATGCCAAATATTTGAAAGATCGTCTTCAACAAGCAGGGATAAGTGTCATGCTGAATGAGCTAAGCATCATAGTTGTACTTGAAAGGCCTCGTGACCATGAATTTGTGCGTCGTTGGCAACTCTCATGCGTCAAGGATATGGCACATGTTATTGTGATGCCAGGAATCACACGAGAAATGCTTGACAACTTCATGAGTGAATTAGTGCAACAAAGAAAAGTATGGTATCAAAATGGAAAGACTGATCCTCCTTGTGTTGGAGAGGATATTGGTGCTCAAAATTGTGCATGCTCTTATCATAAGATTGACTACATCTGTCCTTAGAAGACAAACAAGACAAGATCATCTTCCACTTTAAAATTGGAGTTTTTGAGAGCTCTCTAATTTGTTTATATGTCTGCCATAAAGATGATATTTGATTAATTCTTTATGAATTTTGATTTTGATTTCCCACAATGGTACAACCGGACGACATAAATGTAACATTTTCTAATAAAAAAGTTTGAGTACTCTTTCATGTTCTTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g068680.2.1SL2.50ch08:57812822..57814717472-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g068680.2SL2.50ch08:57812621..578147712,151-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g068680.2.1.1SL2.50ch08:57814694..5781477178-n/a
exonexon:Solyc08g068680.2.1.2SL2.50ch08:57814014..57814495482-1
exonexon:Solyc08g068680.2.1.3SL2.50ch08:57813728..57813921194-2
exonexon:Solyc08g068680.2.1.4SL2.50ch08:57813488..57813624137-n/a
exonexon:Solyc08g068680.2.1.5SL2.50ch08:57812621..57813401781-n/a
intronintron:Solyc08g068680.2.1.2SL2.50ch08:57814496..57814693n/a-n/a
intronintron:Solyc08g068680.2.1.3SL2.50ch08:57813922..57814013n/a-n/a
intronintron:Solyc08g068680.2.1.4SL2.50ch08:57813625..57813727n/a-n/a
intronintron:Solyc08g068680.2.1.5SL2.50ch08:57813402..57813487n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17906568%2Fdetails feature 17906568
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