Solanum lycopersicum mRNA Solyc08g075550.2.1
![]() |
Name | Type |
Length
1,044
|
Organism |
Description
Alternative oxidase (AHRD V1 **** Q84V46_SOLLC); contains Interpro domain(s) IPR002680 Alternative oxidase
|
Location(s)
SL2.50ch08:59715930..59718727
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005740
- Length
- 2798
- Sifter term
- GO:0009916
![]() | spliced mRNA sequence, including UTRs |
>Solyc08g075550.2.1 Alternative oxidase (AHRD V1 **** Q84V46_SOLLC); contains Interpro domain(s) IPR002680 Alternative oxidase
TTAAACACTATATATAAACCAACAATTTTTCACCATAAAAAAACATCATCAACATTTCTTATTTTGTTAAATTTCAATCATTTGAATATGAATCGTAATGCAGCAATGAAAATATCTGGATTACTTATGAGACAATTACGGGGCGAATTTTTGCCCCGTGGAGGCATGGTACAAATTCGTCATTGGAGTAATATGAATACTTCTAGTAAAACAAAAGAAGAACAAAAAACACATAATCAACCATCACACACTGATGCAACCAACGCCGCCGGCGACAAGGCTAAGAAAATTGTTAGCTATTGGGGGGTGGATCCTCCCAAAATCTCCAAGGAAGATGGTACACCATGGAAGTGGAACAGCTTCAGGCCATGGGAGACGTACTCAGCTGATATTTCAATTGATGTGGAGAAGCACCATATGCCTACCAATTTTATGGACAAGTTTGCTTATTGGACAGTCCAATCTTTAAAGTACCCCACCTACTTGTTTTTCCAGAGACGTCACATGTGTCATGCTATGTTACTAGAAACGGTTGCAGCCGTGCCAGGCATGGTAGGTGGTATGCTCCTCCACTGTAAATCCCTCCGTCGATTCGAGCACAGTGGTGGTTGGATCAAAGCCCTCCTCGAAGAAGCAGAGAACGAACGGATGCATCTCATGACCTTTATCGAATTATCAAATCCGAAATGGTACGAACGTGCATTAGTCTTTGCAGTTCAAGGCGTATTTGTCAATGCCTATTTCATTGCCTATTTAGCGTCCCCAAAATTGGCTCATCGAATTGTTGGTTACTTAGAAGAAGAAGCAGTAAATTCGTATACAGAGTTTTTGATCGATATAGAAAAGGGACTTTTCGAGAACTCGCCTGCACCGGCTATTGCTATTGATTATTGGCGTTTGCCGGCCGATGCAACGCTAAAAGATGTTGTTACTGTTATTAGGGCCGATGAGGCACATCATCGGGACCTAAATCACTTTGCTTCGGATATACAGTGTCAAGGGCATGAGTTGAAGGGCTACCCTGCCCCAATTGGATATCATTGA
TTAAACACTATATATAAACCAACAATTTTTCACCATAAAAAAACATCATCAACATTTCTTATTTTGTTAAATTTCAATCATTTGAATATGAATCGTAATGCAGCAATGAAAATATCTGGATTACTTATGAGACAATTACGGGGCGAATTTTTGCCCCGTGGAGGCATGGTACAAATTCGTCATTGGAGTAATATGAATACTTCTAGTAAAACAAAAGAAGAACAAAAAACACATAATCAACCATCACACACTGATGCAACCAACGCCGCCGGCGACAAGGCTAAGAAAATTGTTAGCTATTGGGGGGTGGATCCTCCCAAAATCTCCAAGGAAGATGGTACACCATGGAAGTGGAACAGCTTCAGGCCATGGGAGACGTACTCAGCTGATATTTCAATTGATGTGGAGAAGCACCATATGCCTACCAATTTTATGGACAAGTTTGCTTATTGGACAGTCCAATCTTTAAAGTACCCCACCTACTTGTTTTTCCAGAGACGTCACATGTGTCATGCTATGTTACTAGAAACGGTTGCAGCCGTGCCAGGCATGGTAGGTGGTATGCTCCTCCACTGTAAATCCCTCCGTCGATTCGAGCACAGTGGTGGTTGGATCAAAGCCCTCCTCGAAGAAGCAGAGAACGAACGGATGCATCTCATGACCTTTATCGAATTATCAAATCCGAAATGGTACGAACGTGCATTAGTCTTTGCAGTTCAAGGCGTATTTGTCAATGCCTATTTCATTGCCTATTTAGCGTCCCCAAAATTGGCTCATCGAATTGTTGGTTACTTAGAAGAAGAAGCAGTAAATTCGTATACAGAGTTTTTGATCGATATAGAAAAGGGACTTTTCGAGAACTCGCCTGCACCGGCTATTGCTATTGATTATTGGCGTTTGCCGGCCGATGCAACGCTAAAAGATGTTGTTACTGTTATTAGGGCCGATGAGGCACATCATCGGGACCTAAATCACTTTGCTTCGGATATACAGTGTCAAGGGCATGAGTTGAAGGGCTACCCTGCCCCAATTGGATATCATTGA
![]() |
unprocessed genomic sequence underlying each location of this mRNA |
![]() |
Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc08g075550.2.1 | SL2.50ch08:59715929..59718640 | 319 | - | n/a |
Add items to a list:
Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc08g075550.2 | SL2.50ch08:59715930..59718727 | 2,798 | - | n/a |
Add items to a list:
Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc08g075550.2.1.1 | SL2.50ch08:59718362..59718727 | 366 | - | n/a |
exon | exon:Solyc08g075550.2.1.2 | SL2.50ch08:59717951..59718079 | 129 | - | n/a |
exon | exon:Solyc08g075550.2.1.3 | SL2.50ch08:59716092..59716580 | 489 | - | n/a |
exon | exon:Solyc08g075550.2.1.4 | SL2.50ch08:59715930..59715989 | 60 | - | n/a |
intron | intron:Solyc08g075550.2.1.2 | SL2.50ch08:59718080..59718361 | n/a | - | n/a |
intron | intron:Solyc08g075550.2.1.3 | SL2.50ch08:59716581..59717950 | n/a | - | n/a |
intron | intron:Solyc08g075550.2.1.4 | SL2.50ch08:59715990..59716091 | n/a | - | n/a |
Add items to a list:
Related views |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)