Solanum lycopersicum mRNA Solyc08g076730.2.1
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Name | Type |
Length
1,268
|
Organism |
Description
TPR domain protein (AHRD V1 *-*- B6U810_MAIZE); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
|
Location(s)
SL2.50ch08:60681867..60683297
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Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005488
- Length
- 1431
![]() | spliced mRNA sequence, including UTRs |
>Solyc08g076730.2.1 TPR domain protein (AHRD V1 *-*- B6U810_MAIZE); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
CAAAGTTTTCTCACTCAAATAATAAATATAATAAATAGTTGTTTCAGTATGAAAACGGTCCTTTTCCGAACCGGTTCCGGCTCAATTCCGGCGGTTGTTCCCGGTTCTCAGAGAGCAGTCTCTGTTTCCACTCGTGAATCCATCGGTAAAGTGTTTAATGGAGAGAAGAAGAAAGGATGTTCTTCTCCTATGATCTCTCTGTATTCGGAAGTCAATCGTCGCGGTATTCGCCGGGTTTCATCTGACTCCGACGTGATCCGGTCGGGATTTGAAGGTTCGAGTGTAACTAGAAAGTTGAGTAAGATTGGATCGAGGTCATTATCGTCAATAATACCGGAGGAGGATTGCGGTTCTGAACAGAATGAGTTGGAGGTTTTGCGAAGTATTGGATCACTGAGTTTGACGGAAGATCGACGGAGTTACGCTGGAGACTGGCATAGGAACAGTATTCCAGTCGATGAGCTTGGATTTTCCGGCGGTGGAATCGGTTCCACCAAAAACAAAAAGTTTGGCGGCAATGGTGACGGTAGAGATGAGATCGATGCAGATAGTTTAACCGGCGGAAAGTCAGATCCAAGGAAAATTGGAGCCTATTATAAGGAAATGCTGAATTCAGATCCTATGAATCCTCTTCTTCTTAGAAACTACGGCAAGTATTTGCATGAGGTGGAGAGAGACTTTGTGAAGGCTGAAGAATGCTACGGAAGAGCTATACTTGCAAGTCCTGGTGACGGAGAAGTGCTTTCTCTGTATGGCAAATTAGTTTGGGAGACGCAGCGAGACGAAAACAGAGCCAAATCTTACTTTGATCAAGCTGTTCACGCTTCTCCTAATGACTGCACTGTGTTGGGATCATATGCACACTTCATGTGGGAAGCCGAAGGAGACCAAGACGAAGACGAAGACGAAGAAAGAGAAACAGTAGCAGCTGGAGCATCAATGGTTGCAGCTTACTAGCCTGCAGAAAACAGATAAAAAAAAATAAAATTTCTATTAACTATGTTAAGTTCACCTTCGGCTTTGGATGGGAAGCTAGTTGAGAGCTAATTAACTTAATTTAATGTACTTGTAAAATGTGTAAAAAGAACCTAATAAAAGAGGGAGTATGTATTAAACTTAAATTAACTAAAATCAATGTTCTAATTGAAAAAAATGAAGGGGGAAATCTGTAGAAGAGAGTCAAAAGTGAAGAAATAATTATTAAGTATGTCTACAGTTCGAAGTTTTTGGTGTACATGTATTAACTATTATTAGTGCTCTTGATCTTC
CAAAGTTTTCTCACTCAAATAATAAATATAATAAATAGTTGTTTCAGTATGAAAACGGTCCTTTTCCGAACCGGTTCCGGCTCAATTCCGGCGGTTGTTCCCGGTTCTCAGAGAGCAGTCTCTGTTTCCACTCGTGAATCCATCGGTAAAGTGTTTAATGGAGAGAAGAAGAAAGGATGTTCTTCTCCTATGATCTCTCTGTATTCGGAAGTCAATCGTCGCGGTATTCGCCGGGTTTCATCTGACTCCGACGTGATCCGGTCGGGATTTGAAGGTTCGAGTGTAACTAGAAAGTTGAGTAAGATTGGATCGAGGTCATTATCGTCAATAATACCGGAGGAGGATTGCGGTTCTGAACAGAATGAGTTGGAGGTTTTGCGAAGTATTGGATCACTGAGTTTGACGGAAGATCGACGGAGTTACGCTGGAGACTGGCATAGGAACAGTATTCCAGTCGATGAGCTTGGATTTTCCGGCGGTGGAATCGGTTCCACCAAAAACAAAAAGTTTGGCGGCAATGGTGACGGTAGAGATGAGATCGATGCAGATAGTTTAACCGGCGGAAAGTCAGATCCAAGGAAAATTGGAGCCTATTATAAGGAAATGCTGAATTCAGATCCTATGAATCCTCTTCTTCTTAGAAACTACGGCAAGTATTTGCATGAGGTGGAGAGAGACTTTGTGAAGGCTGAAGAATGCTACGGAAGAGCTATACTTGCAAGTCCTGGTGACGGAGAAGTGCTTTCTCTGTATGGCAAATTAGTTTGGGAGACGCAGCGAGACGAAAACAGAGCCAAATCTTACTTTGATCAAGCTGTTCACGCTTCTCCTAATGACTGCACTGTGTTGGGATCATATGCACACTTCATGTGGGAAGCCGAAGGAGACCAAGACGAAGACGAAGACGAAGAAAGAGAAACAGTAGCAGCTGGAGCATCAATGGTTGCAGCTTACTAGCCTGCAGAAAACAGATAAAAAAAAATAAAATTTCTATTAACTATGTTAAGTTCACCTTCGGCTTTGGATGGGAAGCTAGTTGAGAGCTAATTAACTTAATTTAATGTACTTGTAAAATGTGTAAAAAGAACCTAATAAAAGAGGGAGTATGTATTAAACTTAAATTAACTAAAATCAATGTTCTAATTGAAAAAAATGAAGGGGGAAATCTGTAGAAGAGAGTCAAAAGTGAAGAAATAATTATTAAGTATGTCTACAGTTCGAAGTTTTTGGTGTACATGTATTAACTATTATTAGTGCTCTTGATCTTC
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc08g076730.2.1 | SL2.50ch08:60682177..60683249 | 303 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc08g076730.2 | SL2.50ch08:60681867..60683297 | 1,431 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc08g076730.2.1.1 | SL2.50ch08:60682632..60683297 | 666 | - | n/a |
exon | exon:Solyc08g076730.2.1.2 | SL2.50ch08:60682374..60682546 | 173 | - | 1 |
exon | exon:Solyc08g076730.2.1.3 | SL2.50ch08:60681867..60682295 | 429 | - | n/a |
intron | intron:Solyc08g076730.2.1.2 | SL2.50ch08:60682547..60682631 | n/a | - | n/a |
intron | intron:Solyc08g076730.2.1.3 | SL2.50ch08:60682296..60682373 | n/a | - | n/a |
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