Solanum lycopersicum mRNA Solyc08g077030.2.1

mRNA details  
Name
Solyc08g077030.2.1
Type
mRNA
Length
1,598
Organism
Solanum lycopersicum
Description
AT-hook motif nuclear localized protein 13 (AHRD V1 ***- Q940I0_ARATH); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296
Location(s)
SL2.50ch08:60970733..60977474
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003677
  • GO:0006355
Length
6742
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g077030.2.1 AT-hook motif nuclear localized protein 13 (AHRD V1 ***- Q940I0_ARATH); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296

AATTCTCTGTTTTCATGGATTCTCAAGAATCCCAAGCGGGTCACCACCAAAATCAACACCATCATCAACCCCAACACCCCCAATTTCATCACCAACAGCAACATGGTCATGGCCATGGCCATGGCCATCATCCCATGATGATGGCAAGACCACAACACCATCAGCTTCAACAGCTTCAACAGCAGCATCACCAACATCAGCAGCAAGCTAACACCTTTGGTTTACCTAACAATGTTCCAACACATAACAACAACAATTCTGCTATGATGCAACAGCTTCAGCAACACCAGCAGCAAAATTCTGGTTTTCCTTTTAATTCTGTGGTTAATACGGCTTCTGCGGCGGTGGCGGCGCCTCAACATAATCTTGATTACTCAGATGCGTCATCTCCTAGGGCTACTGGATTCAGCATTGAGCCTGCTAGGAAAAAAAGGGGCCGACCCAGGAAGTATTCACCTGATGGTAACATCGCTTTGGGTCTCTCGCCTACTCCTGTTACCCCGATTTCATCTGGGGTGCCTCCTACAGATTCCGGAAGCGGTGGCGGTGGTGATGCGGAGGGTCCTTCTTCCGAGAATCCTTCGAAAAAGGCCCGAGGAAGGCCTCCTGGCTCTGGAAAGAAACAGCTAGATGCTTTAGGTGCAGCTGGAGTTGGGTTTACACCTCATGTGATCACAGTGAATGTTGGGGAGGACATAGCTTCAAAGATAATGGCTTTCTCCCAGCAAGGGCCGCGTACTGTTTGTATTCTATCTGCAAATGGAGCCATCTGTAACGTCACCCTTCGCCAACCAGCAATGGGGGGTGGCACTATTAATTACGAGGGCCGATATGAGATCATCTCATTGACAGGTTCCTTCATGCAGTCGGAGAATAATGGCAGCAGTGGACCAAGTGGTCTGAGTGTGTCACTGGCGGGGGCAGATGGTAGAGTAATGGGTGGTGGAGTTTCAGGAGTGCTTATGGCTGCCACACCAGTGCAGGTAATTGTGGGTAGCTTCCTTGCTGAAGGGAAAAAGCCAAAGTCTAAGGTGCCATCTTCGACACCACCATCCAATATGTTGAATTTTGGTGCTCCTGCCACAGGGGAGAGCCCTCCTTCTCAAGGTGATGCCTCAAGTGACTCGTCTGAGGAAAATGGCGACAGTCCTTTCCAACATGAATCAGGACCTTATGGTAACGCTGGCCAACCAATGCATGGTATGTCAATGTATGCAAATATGGGCTGGCCAAAATCGCTGTGAAAACACTTTTTCTGTGTCGACATGAAGTTGCCAAGGGTTTTCCCCTTGCCAACGCTAACAGGGCAGAGTATAGGCGCGTTTCTTGATTTCTCAACTTGAGCTTATTTTCCTTATTTTTCTCCCCGCTTCGATCCTCCCCTCTTTCCAGTATGTAGTTAAGGTAAAATGCTATATGGCTGATTTACAGAAATCCATTTTCATGGTTTCTTTGGCACACTATGGTATTAGTATTAGTAGTAGTAGTATATGTTTAGGTGATGTTTGGTTGGATATTGTTTTACTTCCAGATGGTTAACTTTTAGGAATTATTAGATTGGATAGAAATTTCTTCTAAATGAATGGAGTATTTTCTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g077030.2.1SL2.50ch08:60971086..60977460410-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g077030.2SL2.50ch08:60970733..609774746,742-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g077030.2.1.1SL2.50ch08:60976836..60977474639-2
exonexon:Solyc08g077030.2.1.2SL2.50ch08:60976671..6097672353-n/a
exonexon:Solyc08g077030.2.1.3SL2.50ch08:60973348..60973479132-n/a
exonexon:Solyc08g077030.2.1.4SL2.50ch08:60971431..60971589159-n/a
exonexon:Solyc08g077030.2.1.5SL2.50ch08:60970733..60971347615-n/a
intronintron:Solyc08g077030.2.1.2SL2.50ch08:60976724..60976835n/a-n/a
intronintron:Solyc08g077030.2.1.3SL2.50ch08:60973480..60976670n/a-n/a
intronintron:Solyc08g077030.2.1.4SL2.50ch08:60971590..60973347n/a-n/a
intronintron:Solyc08g077030.2.1.5SL2.50ch08:60971348..60971430n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17910245%2Fdetails feature 17910245
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)