Solanum lycopersicum mRNA Solyc08g077980.2.1
mRNA details
|
| Name | Type |
Length
1,135
|
Organism |
| Description |
|
Location(s)
SL2.50ch08:61867727..61870658
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Length
- 2932
- Sifter term
- GO:0005515
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g077980.2.1 Bax inhibitor (AHRD V1 ***- Q6U1L7_SOLLC); contains Interpro domain(s) IPR006214 Uncharacterised protein family UPF0005
CAACACTATATAAACGCATCTTCAACGCCTTACAGGCAGACGACTTTCGCATATCGGTATAGCAAACATAACATTGTCTACGTTCAGATAAATATCCTTTGCTCATTTCAGTTCCAAAAACTCGAAGAAGAAGAAGAAGAGAACAATGGAAGGTTTCACATCGTTCTTCGACTCGCAATCTGCCTCTCGCAACCGCTGGAGTTATGATTCTCTCAAAAACTTCCGCCAGATCTCACCTCTCGTTCAAACTCATCTCAAGCAGGTGTACCTTACGCTATGCTGTGCTTTAGTGGCATCGGCTGCTGGGGCTTACCTTCACATTCTATGGAATATCGGTGGCCTCCTCACAACAATGGCTTGCATGGGAAGCATGGTGTGGCTTCTCTCAGCTCCTCCTTATCAAGAGCAGCAAAAAAGGGTGGCTCTTCTGATGGCAGCTGCACTTTTTGAAGGCGCCTCTATTGGTCCTCTGATTGAGCTGGGCATTAACTTCGATCCAAGCATTGTGTTTGGCGCTTTTGTAGGTTGTGCTGTGGTTTTTGGTTGCTTCTCAGCTGCTGCCATGTTGGCAAGGCGCAGGGAGTACTTGTACCTCGGGGGCCTTCTTTCATCTGGCGTCTCCCTTCTCTTCTGGTTGCACTTTGCATCCTCCATTTTTGGTGGTTCCATGGCTGTTTTCAAGTTTGAGTTGTATTTTGGACTCTTGGTGTTTGTGGGCTACATCGTCTTTGACACCCAAGAAATTATTGAGAAGGCTCACTTGGGTGATATGGATTACGTTAAGCATGCATTGACCCTTTTCACAGATTTTGTCGCTGTTTTTGTGCGGATTCTGATCATCATGTTAAAGAATGCATCTGAGAAGGAAGAGAAGAAGAAGAAGAGGAGAAACTAGATTTGCTTCTCAACTTGTGGTTTCCATAACTCCTTGTGTTCACCTGAAACAAGCATGTTAATAGTTTGATACTTGCTTCACTTTAGCATAGGCTGTGATGTAATGTCGTGTGACATGCCATTATGGCTGTGTGATTGAGCATCTAGCCTTTTTATCTTCTAAAGCTTTTTTCTTAACATTGATAAGGAAAGTTCCTTGTGATAACATTTAAGACCATTTTAATTTCTCCTTTTCTCATTC
CAACACTATATAAACGCATCTTCAACGCCTTACAGGCAGACGACTTTCGCATATCGGTATAGCAAACATAACATTGTCTACGTTCAGATAAATATCCTTTGCTCATTTCAGTTCCAAAAACTCGAAGAAGAAGAAGAAGAGAACAATGGAAGGTTTCACATCGTTCTTCGACTCGCAATCTGCCTCTCGCAACCGCTGGAGTTATGATTCTCTCAAAAACTTCCGCCAGATCTCACCTCTCGTTCAAACTCATCTCAAGCAGGTGTACCTTACGCTATGCTGTGCTTTAGTGGCATCGGCTGCTGGGGCTTACCTTCACATTCTATGGAATATCGGTGGCCTCCTCACAACAATGGCTTGCATGGGAAGCATGGTGTGGCTTCTCTCAGCTCCTCCTTATCAAGAGCAGCAAAAAAGGGTGGCTCTTCTGATGGCAGCTGCACTTTTTGAAGGCGCCTCTATTGGTCCTCTGATTGAGCTGGGCATTAACTTCGATCCAAGCATTGTGTTTGGCGCTTTTGTAGGTTGTGCTGTGGTTTTTGGTTGCTTCTCAGCTGCTGCCATGTTGGCAAGGCGCAGGGAGTACTTGTACCTCGGGGGCCTTCTTTCATCTGGCGTCTCCCTTCTCTTCTGGTTGCACTTTGCATCCTCCATTTTTGGTGGTTCCATGGCTGTTTTCAAGTTTGAGTTGTATTTTGGACTCTTGGTGTTTGTGGGCTACATCGTCTTTGACACCCAAGAAATTATTGAGAAGGCTCACTTGGGTGATATGGATTACGTTAAGCATGCATTGACCCTTTTCACAGATTTTGTCGCTGTTTTTGTGCGGATTCTGATCATCATGTTAAAGAATGCATCTGAGAAGGAAGAGAAGAAGAAGAAGAGGAGAAACTAGATTTGCTTCTCAACTTGTGGTTTCCATAACTCCTTGTGTTCACCTGAAACAAGCATGTTAATAGTTTGATACTTGCTTCACTTTAGCATAGGCTGTGATGTAATGTCGTGTGACATGCCATTATGGCTGTGTGATTGAGCATCTAGCCTTTTTATCTTCTAAAGCTTTTTTCTTAACATTGATAAGGAAAGTTCCTTGTGATAACATTTAAGACCATTTTAATTTCTCCTTTTCTCATTC
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g077980.2.1 | SL2.50ch08:61867966..61870513 | 250 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g077980.2 | SL2.50ch08:61867727..61870658 | 2,932 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g077980.2.1.1 | SL2.50ch08:61870397..61870658 | 262 | - | n/a |
| exon | exon:Solyc08g077980.2.1.2 | SL2.50ch08:61869483..61869626 | 144 | - | n/a |
| exon | exon:Solyc08g077980.2.1.3 | SL2.50ch08:61869263..61869357 | 95 | - | 1 |
| exon | exon:Solyc08g077980.2.1.4 | SL2.50ch08:61868392..61868578 | 187 | - | n/a |
| exon | exon:Solyc08g077980.2.1.5 | SL2.50ch08:61868128..61868283 | 156 | - | n/a |
| exon | exon:Solyc08g077980.2.1.6 | SL2.50ch08:61867727..61868017 | 291 | - | n/a |
| intron | intron:Solyc08g077980.2.1.2 | SL2.50ch08:61869627..61870396 | n/a | - | n/a |
| intron | intron:Solyc08g077980.2.1.3 | SL2.50ch08:61869358..61869482 | n/a | - | n/a |
| intron | intron:Solyc08g077980.2.1.4 | SL2.50ch08:61868579..61869262 | n/a | - | n/a |
| intron | intron:Solyc08g077980.2.1.5 | SL2.50ch08:61868284..61868391 | n/a | - | n/a |
| intron | intron:Solyc08g077980.2.1.6 | SL2.50ch08:61868018..61868127 | n/a | - | n/a |
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mRNA details
mRNA details

