Solanum lycopersicum mRNA Solyc08g078950.2.1

mRNA details  
Name
Solyc08g078950.2.1
Type
mRNA
Length
2,075
Organism
Solanum lycopersicum
Description
Nitrate transporter (AHRD V1 **** Q852P7_TOBAC); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region
Location(s)
SL2.50ch08:62610836..62616323
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
5488
Nb exon
7
Sifter term
GO:0042936
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g078950.2.1 Nitrate transporter (AHRD V1 **** Q852P7_TOBAC); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region

CCAATTTCTTCCTTTAACCTTTTGATACACACACACACAAAAAAAAATGTCACTTCCTGAGACACAACATGACACAAAAACTCTCCCAGATGCTTGGGATTACAAAGGTCGACCAGCTCTTCGTTCCTCGTCCGGCGGTTGGTCTAGCGCCGCGATGATATTAGGGATTGAGGCGGTGGAGAGGCTAACAACACTAGGTATAGCTGTAAACCTTGTGACATATTTGACTGGAACAATGCATTTAGGAAATGCAAGTTCAGCCAACAACGTTACAAATTTTCTTGGGACTTCATTTATGTTAACTTTACTTGGTGGATTTGTAGCCGACACTTTTCTTGGACGGTACCTTACAATTGGTATCTTTACTACTATTCAAGCTATGGGTGTTACGATCTTGACCATTTCAACTATAATCCCAAGCCTCCAACCACCAAAGTGTGAGCTAGGTAGTTCAACATGCATCCCCGCAAGTGGCAAACAACTCATGGTCCTATACATCGCGCTATACATGACCGCACTCGGGACCGGGGGGTTAAAATCCAGCGTGTCCGGGTTCGGGTCGGACCAATTTGATGAAACGGACAAAAAAGAAAGAGGACAAATGATAAAATTCTTCAATTGGTTCTTTTTCTTTATTAACGTGGGATCACTAGGTGCAGTGACAATATTAGTGTACATTCAAGATAATTTGGGAAGAGAATGGGGTTATGGAATTTGTGCTTGTGCTATCGTTATCGGTTTGGTGATTTTTCTATTGGGAACTAGAAAATATCGGTTTAAGAAACTTGTGGGGAGTCCATTGACACAAATTGCTTCCGTTTTTGTGGCTGCTTTGAGGAAAAAACATTTGGAATTACCTTCTGATCCTTCACTTCTTTTCAATATTGATGATATTCCTGGTGATGGAAATAAAAAAGCTAAACAAAGGTTGCCACACAGCAAAGAGTACCGTTTCTTGGACAAGGCTGCTATTAAGGTAAATGACGTTGAATCTGCTGGATTTACCGTGGTAAATAAATGGAATTTATCTACTTTAACTGATGTTGAAGAGGTAAAATTGGTACTTAGAATGTTACCAACATGGGCCACAACTATAATGTTTTGGACTGTCTATGCCCAAATGACAACATTTTCCGTATCACAAGCTACAACAATGGATCGTCACATCGGAAAATTCGAGATCCCTCCGGCGTCGTTGACGCTATTTTTCGTAGGAAGTATCCTCTTAACATGTGTGTTCTACGATCGTGTAGTTATACCAATCACTAAACGTGTCCTCAACAATCCACAGGGATTAAGCCCACTGCAACGTATTGCAGTAGGCTTAGTCCTATCGATTATAGCTATGATTGCGGCCGCATTGACCGAAGTGAAAAGATTAAACGTGGCACACATGCATGGATTGACTAATGATGCTAATGCTATGATACCATTGAGTGTTTTTTGGTTAGTGCCACAATTTTTACTAGTAGGGGCAGGTGAAGCATTTACATATATTGGACAACTTGATTTCTTTTTAAGAGAATGCCCAAAAGGGATGAAAACAATGAGTACAGGGTTGTTTTTGAGTACACTTTCACTTGGATTTTTCGTCAGTTCAATTTTGGTGACAATTGTGCACAAAGTAACGGGGGATAAACCATGGTTAGCTGATAATTTGAACCAAGGAAGGTTATATGATTTCTATTGGCTATTGGCAATATTGAGTGTGTTGAATTTGATGATTTTCTTGTTTTTTTCGAGACGATACGTGTACAAGGAAAAGAGGCTAGCTGACGTTGGGATTGAAATGGAGGATTCAGGACCAGCTTGTCACTAAGATCTTTTTTCATAAAAGTAAATTAGTTTTTCTTTTTTTTTAAAACTTTAATGGAAGGGTTACGTATGTATTGTAGGTAACCTAGTTATAATATATGTACAAAGAATGGAAAAGAGCAAAGTTAATGAAAAGTTGTAGCTCATTCCAATCTTCTTTTTTTCTCATATGCATATGTATTTGTACAATAACCAAAATAATATAAATCAAATGCAATCGAATGAGCAATTTCCAAAGAAAGAAAAAAAAAGAAAAAAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g078950.2.1SL2.50ch08:62610881..62615036591+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g078950.2SL2.50ch08:62610836..626163235,488+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g078950.2.1.1SL2.50ch08:62610836..62610999164+n/a
exonexon:Solyc08g078950.2.1.2SL2.50ch08:62611100..62611277178+n/a
exonexon:Solyc08g078950.2.1.3SL2.50ch08:62611365..6261140440+2
exonexon:Solyc08g078950.2.1.4SL2.50ch08:62612186..62612754569+1
exonexon:Solyc08g078950.2.1.5SL2.50ch08:62614169..626152731,105+n/a
exonexon:Solyc08g078950.2.1.6SL2.50ch08:62615933..6261594311+1
exonexon:Solyc08g078950.2.1.7SL2.50ch08:62616316..626163238+n/a
intronintron:Solyc08g078950.2.1.1SL2.50ch08:62611000..62611099n/a+n/a
intronintron:Solyc08g078950.2.1.2SL2.50ch08:62611278..62611364n/a+n/a
intronintron:Solyc08g078950.2.1.3SL2.50ch08:62611405..62612185n/a+n/a
intronintron:Solyc08g078950.2.1.4SL2.50ch08:62612755..62614168n/a+n/a
intronintron:Solyc08g078950.2.1.5SL2.50ch08:62615274..62615932n/a+n/a
intronintron:Solyc08g078950.2.1.6SL2.50ch08:62615944..62616315n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17912582%2Fdetails feature 17912582
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)